CX671452

Overview
NameCX671452
Unique NameCX671452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_THEEB (50S ribosomal protein L15 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplO PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.966e-24
Identity = 72/152 (47.37%), Postives = 90/152 (59.21%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            R  +L PQ GS         GIAAGQG S GFGMRGQKSRSG   R GFEGGQ PLYRR+PKL+      H  L K   Y  +N+  +          V++++L + G++  +    K PLK+LGDGEL+ KL   A AFS SA+ K+EAAG
Sbjct:    2 RFQDLHPQAGSRRRKRRIGRGIAAGQGASGGFGMRGQKSRSGRPTRPGFEGGQNPLYRRLPKLK------HFPLVKRKVYTTINVGRLNT--LPANSVVTVQSLLEAGILTTA----KYPLKVLGDGELNVKLEVHAAAFSGSARSKIEAAG 141          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_TRIEI (50S ribosomal protein L15 OS=Trichodesmium erythraeum (strain IMS101) GN=rplO PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.568e-24
Identity = 70/149 (46.98%), Postives = 87/149 (58.39%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            RL +  P+ GS         GI+AGQG SCG GMRGQKSRSG   R GFEGGQ PLYRR+PKL+G          KY  +N+  +  +      EV+L +L K G+I         PLKILGDG+L+  L   A AF+ SA+ K+EAAG
Sbjct:    2 RLKDAIPKKGSQQRGRRVGRGISAGQGASCGKGMRGQKSRSGGSTRPGFEGGQNPLYRRLPKLKGFP---MVNRKKYTIINVSKL--SSLPANTEVTLASLIKVGIITTDDG----PLKILGDGDLNIPLKVYAAAFTASARSKIEAAG 141          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_ANOFW (50S ribosomal protein L15 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rplO PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.353e-24
Identity = 69/155 (44.52%), Postives = 93/155 (60.00%), Query Frame = -1
Query:  377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841
            +L+ L P PGS         GI +G G + G G +GQ +RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL+ +    F +G EV+ E L + G+++    + K  +K+LGDGEL+KKL  KA  FS SAKE +EAAG T  V+
Sbjct:    2 KLHELQPAPGSRKERNRVGRGIGSGNGKTSGKGHKGQNARSGGGVRIGFEGGQTPLFRRLPK----RGFTNIHRKEYAIVNLEALNR--FEDGTEVTPELLLETGVVS----KLKAGIKVLGDGELTKKLTVKAHKFSASAKEAIEAAGGTTEVI 146          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_GLOVI (50S ribosomal protein L15 OS=Gloeobacter violaceus GN=rplO PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24
Identity = 70/154 (45.45%), Postives = 87/154 (56.49%), Query Frame = -1
Query:  380 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTV 841
            RL +  PQ GS         G +AGQG + G GMRGQK RSG GVR GFEGGQ+PLY R+PKL+G           Y  VNLK +         EV++ETL   G++  +      PL++LGDGE    L   A  F+ SA+EK+EAAG T TV
Sbjct:    5 RLEDAVPQSGSRHRKLRVGRGHSAGQGKTSGRGMRGQKCRSGGGVRPGFEGGQIPLYMRLPKLKGFE---LVNPSSYTIVNLKQLR--DLPADSEVNIETLLDAGILTATSG----PLRVLGDGEAHVALQITAAYFTASAREKIEAAGGTCTV 149          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_ACAM1 (50S ribosomal protein L15 OS=Acaryochloris marina (strain MBIC 11017) GN=rplO PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24
Identity = 71/152 (46.71%), Postives = 91/152 (59.87%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVN---LKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            RLN+  P+ GS         GIAAGQG SCGFGMRGQKSRSG   R GFEGGQ PLYRR+PKL+           +Y  +N   L +++A       +V+LE+L  +G+I  +      PLK+LGDGEL+  LN +A A + SA  K+E AG
Sbjct:    2 RLNDPKPKTGSQHRRRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQNPLYRRVPKLKHFT---LINQKQYTTINVGKLNELKAK-----SDVTLESLMAEGIITSNDG----PLKVLGDGELTVALNVQAAAATQSAIAKVEGAG 141          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_RUBXD (50S ribosomal protein L15 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rplO PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 5.720e-24
Identity = 68/157 (43.31%), Postives = 93/157 (59.24%), Query Frame = -1
Query:  377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHA-GLPK-YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841
            RLN L P PGS         G  +G G + G G +G K+RSG      +EGGQMPL RR+P+L+G A G H    PK Y PVN+ ++ A   +EGD + L+ L+  GLI    ++    +KILGDGE+ + +  +A AFS +A+EK+EAAG    VL
Sbjct:    2 RLNELSPPPGSRRARKRVGRGEGSGYGKTSGRGQKGAKARSGTKAYTTYEGGQMPLQRRLPRLKGEARGRHTPAHPKVYDPVNVGELAA---VEGDTIGLDELRAAGLIR---KKADTLVKILGDGEIDRPVTVRAHAFSRAAREKIEAAGGRAEVL 152          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_BACSU (50S ribosomal protein L15 OS=Bacillus subtilis GN=rplO PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 7.471e-24
Identity = 69/155 (44.52%), Postives = 91/155 (58.71%), Query Frame = -1
Query:  377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841
            +L+ L P  GS         GI +G G + G G +GQ +RSG GVR GFEGGQMPL++R+PK     G  +    +Y  VNL  +   GF EG EV+ E L + G+I+    +    +KILG+G+L KKL  KA  FS SAKE +EAAG T  V+
Sbjct:    2 KLHELKPSEGSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPK----RGFTNINRKEYAVVNLDKLN--GFAEGTEVTPELLLETGVIS----KLNAGVKILGNGKLEKKLTVKANKFSASAKEAVEAAGGTAEVI 146          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_GEOTN (50S ribosomal protein L15 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplO PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23
Identity = 68/149 (45.64%), Postives = 89/149 (59.73%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            +L+ L P PGS         GI +G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+ E L +KG+I+    + K  +KILG G++ KKL  KA  FS SAKE +EAAG
Sbjct:    2 KLHELQPAPGSRKKAVRVGRGIGSGNGKTAGRGHKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINRKEYAVVNLDRLNI--FEDGTEVTPELLLEKGVIS----KLKSGVKILGKGQIEKKLTVKAHKFSASAKEAIEAAG 140          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_BACLD (50S ribosomal protein L15 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rplO PE=3 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 1.664e-23
Identity = 68/155 (43.87%), Postives = 92/155 (59.35%), Query Frame = -1
Query:  377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841
            +L+ L P  GS         GI +G G + G G +GQ +RSG GVR GFEGGQMPL++R+PK     G  +    ++  VNL  + +  F EG EV+ E L + G+I+    + K  +KILGDG+L KKL  KA  FS SAK+ +EAAG T  V+
Sbjct:    2 KLHELKPAEGSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPK----RGFTNINRKEFAVVNLDKLNS--FAEGTEVTPELLLETGVIS----KLKSGVKILGDGKLEKKLTVKANKFSASAKQAIEAAGGTAEVI 146          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_SYNY3 (50S ribosomal protein L15 OS=Synechocystis sp. (strain PCC 6803) GN=rplO PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.174e-23
Identity = 68/151 (45.03%), Postives = 89/151 (58.94%), Query Frame = -1
Query:  395 LNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDI---EAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 838
            L+ L P+ G+         GIAAGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRR+PKL+          P Y P +   +   + AG      V+LE+L + G++  +      PLK+LG+GEL+  L   A   S +A+ K+EAAG
Sbjct:    3 LSELSPKDGAKKRRRRVGRGIAAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRLPKLK--------HFPLYNPKHFTVVNVGKLAGLAPNTVVTLESLMEAGIVTSNDG----PLKVLGNGELAVALTVHAPC-SKAAQAKIEAAG 140          
The following BLAST results are available for this feature:
BLAST of CX671452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL15_THEEB1.966e-2447.3750S ribosomal protein L15 OS=Thermosynechococcus e... [more]
RL15_TRIEI2.568e-2446.9850S ribosomal protein L15 OS=Trichodesmium erythra... [more]
RL15_ANOFW3.353e-2444.5250S ribosomal protein L15 OS=Anoxybacillus flavith... [more]
RL15_GLOVI4.380e-2445.4550S ribosomal protein L15 OS=Gloeobacter violaceus... [more]
RL15_ACAM14.380e-2446.7150S ribosomal protein L15 OS=Acaryochloris marina ... [more]
RL15_RUBXD5.720e-2443.3150S ribosomal protein L15 OS=Rubrobacter xylanophi... [more]
RL15_BACSU7.471e-2444.5250S ribosomal protein L15 OS=Bacillus subtilis GN=... [more]
RL15_GEOTN1.274e-2345.6450S ribosomal protein L15 OS=Geobacillus thermoden... [more]
RL15_BACLD1.664e-2343.8750S ribosomal protein L15 OS=Bacillus licheniformi... [more]
RL15_SYNY32.174e-2345.0350S ribosomal protein L15 OS=Synechocystis sp. (st... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11B06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11B06-D11-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671452 ID=CX671452; Name=CX671452; organism=Citrus sinensis; type=EST; length=883bp
TTTTTTTTCATCAAATGGTGATCTAATCAACATAATAACTGAGATTTGGC
TTTCCAGCTAAGTAACATGAGAATCAGAACATTGAGAGTTTAGCTGAATT
TTTAAAAGGGAGGGGATACAAAGAAGAGACAAATTCCAGAAATTACAGCT
ATAGACATCCTCCTCTCATTTCGCTACCCCGAAAACCTAAAACCAGAGAA
AAAGAATCGAAGACAATTCAATGGCTCTACTTAGTTACAGTGAGTGAAAA
AAACCAAGTGGTTCAAGCTGAAGTTGAATCGGATGCAGCTGCAGCAGCTC
TCTTCTTGGCGAAGTATTCTTCAGCTCGTGCAAGGTTCTTAGCTACTGAT
GGTTTCACCCACTTCTTTCGGCCAGGTAAGACAGTGAGGGTACAGCCTGC
AGCTTCAAGCTTCTCCTTTGCTGATGTAGAGAAGGCACGAGCCTTGAAGT
TCAGCTTCTTGCTTAATTCTCCATCACCAAGAATCTTTAAAGGCAGTTTC
CTTTCTCTTCCTGAGGGATTGATCAAGCCCTTCTTCTTCAAAGTCTCTAG
TGAGACTTCATCCCCCTCTAGAAAACCAGCTGCTTCTATGTCTTTCAAGT
TAACAGGGACATACTTAGGTAACCCAGCATGCATACCTCCGGCAATCCCA
CGGAGCTTAGGAATTCGACGATAAAGAGGCATTTGACCACCTTCAAAACC
CTTTCTAACGCCAGGACCAGACCTCGATTTCTGACCTCTCATTCCAAACC
CACAGCTGTTACCTTGCCCAGCTGCTATTCCTCTCCCCTTTCTCTTCCCT
CTCTTTCTCGAACCCGGTTGTGGGCCCAGGTTATTTAACCGGAACCGTAC
ATTCGTAACGGGACCCGAACCAACAGTTGCTGA
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