CX671452
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_THEEB (50S ribosomal protein L15 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplO PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 1.966e-24 Identity = 72/152 (47.37%), Postives = 90/152 (59.21%), Query Frame = -1 Query: 395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841 R +L PQ GS GIAAGQG S GFGMRGQKSRSG R GFEGGQ PLYRR+PKL+ H L K Y +N+ + V++++L + G++ + K PLK+LGDGEL+ KL A AFS SA+ K+EAAG Sbjct: 2 RFQDLHPQAGSRRRKRRIGRGIAAGQGASGGFGMRGQKSRSGRPTRPGFEGGQNPLYRRLPKLK------HFPLVKRKVYTTINVGRLNT--LPANSVVTVQSLLEAGILTTA----KYPLKVLGDGELNVKLEVHAAAFSGSARSKIEAAG 141
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_TRIEI (50S ribosomal protein L15 OS=Trichodesmium erythraeum (strain IMS101) GN=rplO PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 2.568e-24 Identity = 70/149 (46.98%), Postives = 87/149 (58.39%), Query Frame = -1 Query: 395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841 RL + P+ GS GI+AGQG SCG GMRGQKSRSG R GFEGGQ PLYRR+PKL+G KY +N+ + + EV+L +L K G+I PLKILGDG+L+ L A AF+ SA+ K+EAAG Sbjct: 2 RLKDAIPKKGSQQRGRRVGRGISAGQGASCGKGMRGQKSRSGGSTRPGFEGGQNPLYRRLPKLKGFP---MVNRKKYTIINVSKL--SSLPANTEVTLASLIKVGIITTDDG----PLKILGDGDLNIPLKVYAAAFTASARSKIEAAG 141
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_ANOFW (50S ribosomal protein L15 OS=Anoxybacillus flavithermus (strain DSM 21510 / WK1) GN=rplO PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.353e-24 Identity = 69/155 (44.52%), Postives = 93/155 (60.00%), Query Frame = -1 Query: 377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841 +L+ L P PGS GI +G G + G G +GQ +RSG GVR GFEGGQ PL+RR+PK G + +Y VNL+ + F +G EV+ E L + G+++ + K +K+LGDGEL+KKL KA FS SAKE +EAAG T V+ Sbjct: 2 KLHELQPAPGSRKERNRVGRGIGSGNGKTSGKGHKGQNARSGGGVRIGFEGGQTPLFRRLPK----RGFTNIHRKEYAIVNLEALNR--FEDGTEVTPELLLETGVVS----KLKAGIKVLGDGELTKKLTVKAHKFSASAKEAIEAAGGTTEVI 146
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_GLOVI (50S ribosomal protein L15 OS=Gloeobacter violaceus GN=rplO PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24 Identity = 70/154 (45.45%), Postives = 87/154 (56.49%), Query Frame = -1 Query: 380 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTV 841 RL + PQ GS G +AGQG + G GMRGQK RSG GVR GFEGGQ+PLY R+PKL+G Y VNLK + EV++ETL G++ + PL++LGDGE L A F+ SA+EK+EAAG T TV Sbjct: 5 RLEDAVPQSGSRHRKLRVGRGHSAGQGKTSGRGMRGQKCRSGGGVRPGFEGGQIPLYMRLPKLKGFE---LVNPSSYTIVNLKQLR--DLPADSEVNIETLLDAGILTATSG----PLRVLGDGEAHVALQITAAYFTASAREKIEAAGGTCTV 149
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_ACAM1 (50S ribosomal protein L15 OS=Acaryochloris marina (strain MBIC 11017) GN=rplO PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.380e-24 Identity = 71/152 (46.71%), Postives = 91/152 (59.87%), Query Frame = -1 Query: 395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVN---LKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841 RLN+ P+ GS GIAAGQG SCGFGMRGQKSRSG R GFEGGQ PLYRR+PKL+ +Y +N L +++A +V+LE+L +G+I + PLK+LGDGEL+ LN +A A + SA K+E AG Sbjct: 2 RLNDPKPKTGSQHRRRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQNPLYRRVPKLKHFT---LINQKQYTTINVGKLNELKAK-----SDVTLESLMAEGIITSNDG----PLKVLGDGELTVALNVQAAAATQSAIAKVEGAG 141
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_RUBXD (50S ribosomal protein L15 OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=rplO PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 5.720e-24 Identity = 68/157 (43.31%), Postives = 93/157 (59.24%), Query Frame = -1 Query: 377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHA-GLPK-YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841 RLN L P PGS G +G G + G G +G K+RSG +EGGQMPL RR+P+L+G A G H PK Y PVN+ ++ A +EGD + L+ L+ GLI ++ +KILGDGE+ + + +A AFS +A+EK+EAAG VL Sbjct: 2 RLNELSPPPGSRRARKRVGRGEGSGYGKTSGRGQKGAKARSGTKAYTTYEGGQMPLQRRLPRLKGEARGRHTPAHPKVYDPVNVGELAA---VEGDTIGLDELRAAGLIR---KKADTLVKILGDGEIDRPVTVRAHAFSRAAREKIEAAGGRAEVL 152
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_BACSU (50S ribosomal protein L15 OS=Bacillus subtilis GN=rplO PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 7.471e-24 Identity = 69/155 (44.52%), Postives = 91/155 (58.71%), Query Frame = -1 Query: 377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841 +L+ L P GS GI +G G + G G +GQ +RSG GVR GFEGGQMPL++R+PK G + +Y VNL + GF EG EV+ E L + G+I+ + +KILG+G+L KKL KA FS SAKE +EAAG T V+ Sbjct: 2 KLHELKPSEGSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPK----RGFTNINRKEYAVVNLDKLN--GFAEGTEVTPELLLETGVIS----KLNAGVKILGNGKLEKKLTVKANKFSASAKEAVEAAGGTAEVI 146
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_GEOTN (50S ribosomal protein L15 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplO PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.274e-23 Identity = 68/149 (45.64%), Postives = 89/149 (59.73%), Query Frame = -1 Query: 395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841 +L+ L P PGS GI +G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK G + +Y VNL + F +G EV+ E L +KG+I+ + K +KILG G++ KKL KA FS SAKE +EAAG Sbjct: 2 KLHELQPAPGSRKKAVRVGRGIGSGNGKTAGRGHKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFTNINRKEYAVVNLDRLNI--FEDGTEVTPELLLEKGVIS----KLKSGVKILGKGQIEKKLTVKAHKFSASAKEAIEAAG 140
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_BACLD (50S ribosomal protein L15 OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=rplO PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.664e-23 Identity = 68/155 (43.87%), Postives = 92/155 (59.35%), Query Frame = -1 Query: 377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841 +L+ L P GS GI +G G + G G +GQ +RSG GVR GFEGGQMPL++R+PK G + ++ VNL + + F EG EV+ E L + G+I+ + K +KILGDG+L KKL KA FS SAK+ +EAAG T V+ Sbjct: 2 KLHELKPAEGSRKTRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLFQRLPK----RGFTNINRKEFAVVNLDKLNS--FAEGTEVTPELLLETGVIS----KLKSGVKILGDGKLEKKLTVKANKFSASAKQAIEAAGGTAEVI 146
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_SYNY3 (50S ribosomal protein L15 OS=Synechocystis sp. (strain PCC 6803) GN=rplO PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.174e-23 Identity = 68/151 (45.03%), Postives = 89/151 (58.94%), Query Frame = -1 Query: 395 LNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDI---EAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 838 L+ L P+ G+ GIAAGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRR+PKL+ P Y P + + + AG V+LE+L + G++ + PLK+LG+GEL+ L A S +A+ K+EAAG Sbjct: 3 LSELSPKDGAKKRRRRVGRGIAAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRLPKLK--------HFPLYNPKHFTVVNVGKLAGLAPNTVVTLESLMEAGIVTSNDG----PLKVLGNGELAVALTVHAPC-SKAAQAKIEAAG 140 The following BLAST results are available for this feature:
BLAST of CX671452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671452 ID=CX671452; Name=CX671452; organism=Citrus sinensis; type=EST; length=883bpback to top |