CX671452

Overview
NameCX671452
Unique NameCX671452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_STRSV (50S ribosomal protein L15 OS=Streptococcus sanguinis (strain SK36) GN=rplO PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.034e-21
Identity = 64/155 (41.29%), Postives = 91/155 (58.71%), Query Frame = -1
Query:  377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841
            +L+ L P  GS         G ++G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK     G ++    +Y  VNL  + A  F +G EV+   L + G++    +  K  +KILG+GEL+KKL  KA  FS SA+E + A G ++ V+
Sbjct:    2 KLHELQPAAGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRLPK----RGFLNINRKEYAIVNLDQLNA--FEDGAEVTPVVLIEAGIV----KAEKSGIKILGNGELTKKLTVKAAKFSKSAEEAITAKGGSVEVI 146          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_STRA5 (50S ribosomal protein L15 OS=Streptococcus agalactiae serotype V GN=rplO PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.034e-21
Identity = 64/155 (41.29%), Postives = 90/155 (58.06%), Query Frame = -1
Query:  377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841
            +L+ L P  GS         G ++G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   LK+ G++    R  K  +KILG+GEL+KKL+ KA  FS SA+  + A G ++ V+
Sbjct:    2 KLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRMPK----RGFSNINAKEYALVNLDQLNV--FEDGTEVTPVVLKEAGIV----RAEKSGVKILGNGELTKKLSVKAAKFSKSAEAAITAKGGSIEVI 146          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_STRA3 (50S ribosomal protein L15 OS=Streptococcus agalactiae serotype III GN=rplO PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.034e-21
Identity = 64/155 (41.29%), Postives = 90/155 (58.06%), Query Frame = -1
Query:  377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841
            +L+ L P  GS         G ++G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   LK+ G++    R  K  +KILG+GEL+KKL+ KA  FS SA+  + A G ++ V+
Sbjct:    2 KLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRMPK----RGFSNINAKEYALVNLDQLNV--FEDGTEVTPVVLKEAGIV----RAEKSGVKILGNGELTKKLSVKAAKFSKSAEAAITAKGGSIEVI 146          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_STRA1 (50S ribosomal protein L15 OS=Streptococcus agalactiae serotype Ia GN=rplO PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.034e-21
Identity = 64/155 (41.29%), Postives = 90/155 (58.06%), Query Frame = -1
Query:  377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841
            +L+ L P  GS         G ++G G + G G +GQK+RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   LK+ G++    R  K  +KILG+GEL+KKL+ KA  FS SA+  + A G ++ V+
Sbjct:    2 KLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGGGVRLGFEGGQTPLFRRMPK----RGFSNINAKEYALVNLDQLNV--FEDGTEVTPVVLKEAGIV----RAEKSGVKILGNGELTKKLSVKAAKFSKSAEAAITAKGGSIEVI 146          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_LYSSC (50S ribosomal protein L15 OS=Lysinibacillus sphaericus (strain C3-41) GN=rplO PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.034e-21
Identity = 65/155 (41.94%), Postives = 87/155 (56.13%), Query Frame = -1
Query:  377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841
            +L+ L P  GS         GI +G G + G G +GQ +RSG GVR GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + GL++      K  +K+LG+G L+KKL  KA  FS SAKE +E AG T  V+
Sbjct:    2 KLHELKPAEGSRKQRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQNPLFRRLPK----RGFTNINRKEYAIVNLDALNR--FEDGAEVTTALLLETGLVS----NEKAGIKVLGNGTLNKKLTVKAHKFSASAKEAIENAGGTTEVI 146          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_STRTD (50S ribosomal protein L15 OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=rplO PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 63/155 (40.65%), Postives = 89/155 (57.42%), Query Frame = -1
Query:  377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841
            +L+ L P  GS         G ++G G + G G +GQK+RSG G+R GFEGGQ PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   LK+ G+I    R  K  +K+LG+GEL+KKL  KA  FS SA+  + A G ++ V+
Sbjct:    2 KLHELKPAEGSRKVRNRVGRGTSSGNGKTSGRGQKGQKARSGVGLRPGFEGGQTPLFRRLPK----RGFTNINAKEYTLVNLDQLNV--FEDGTEVTPVVLKEAGII----RAEKSGVKVLGNGELTKKLTVKAAKFSKSAEAAITAKGGSIEVI 146          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_BACHD (50S ribosomal protein L15 OS=Bacillus halodurans GN=rplO PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 65/149 (43.62%), Postives = 86/149 (57.72%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            +L+ L P  GS         GI +G G + G G +GQ +RSG GVR GFEGGQ PLYRR+PK     G  +    ++  VNL+ +    F +G EVS E L + G+++      K  +KILG+G+L KKL  KA  FS SA E +EAAG
Sbjct:    2 KLHELKPAEGSRKVRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQNPLYRRLPK----RGFTNPTRKEFAVVNLEKLNR--FEDGTEVSPELLLETGVVS----NAKDGIKILGNGKLEKKLTVKANKFSASAVEAIEAAG 140          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_LISMO (50S ribosomal protein L15 OS=Listeria monocytogenes GN=rplO PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 64/149 (42.95%), Postives = 85/149 (57.05%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            +L+ L P  GS         G  +G G + G G +GQK+RSG GVR GFEGGQ+PL+RRIPK     G  +    ++  VNL  +    F +G EV+ E L + G+I    R  K  +KIL +G + KKL  KA  FS +AKE +EAAG
Sbjct:    2 KLHELKPSEGSRKERNRVGRGTGSGNGKTSGRGHKGQKARSGGGVRLGFEGGQLPLFRRIPK----RGFTNINRKEFAIVNLDVLNR--FEDGTEVTPELLVETGII----RNEKSGIKILSNGNIEKKLTVKANKFSAAAKEAIEAAG 140          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_LISMH (50S ribosomal protein L15 OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=rplO PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 64/149 (42.95%), Postives = 85/149 (57.05%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            +L+ L P  GS         G  +G G + G G +GQK+RSG GVR GFEGGQ+PL+RRIPK     G  +    ++  VNL  +    F +G EV+ E L + G+I    R  K  +KIL +G + KKL  KA  FS +AKE +EAAG
Sbjct:    2 KLHELKPSEGSRKERNRVGRGTGSGNGKTSGRGHKGQKARSGGGVRLGFEGGQLPLFRRIPK----RGFTNINRKEFAIVNLDVLNR--FEDGTEVTPELLVETGII----RNEKSGIKILSNGNIEKKLTVKANKFSAAAKEAIEAAG 140          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_LISMF (50S ribosomal protein L15 OS=Listeria monocytogenes serotype 4b (strain F2365) GN=rplO PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 64/149 (42.95%), Postives = 85/149 (57.05%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            +L+ L P  GS         G  +G G + G G +GQK+RSG GVR GFEGGQ+PL+RRIPK     G  +    ++  VNL  +    F +G EV+ E L + G+I    R  K  +KIL +G + KKL  KA  FS +AKE +EAAG
Sbjct:    2 KLHELKPSEGSRKERNRVGRGTGSGNGKTSGRGHKGQKARSGGGVRLGFEGGQLPLFRRIPK----RGFTNINRKEFAIVNLDVLNR--FEDGTEVTPELLVETGII----RNEKSGIKILSNGNIEKKLTVKANKFSAAAKEAIEAAG 140          
The following BLAST results are available for this feature:
BLAST of CX671452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL15_STRSV2.034e-2141.2950S ribosomal protein L15 OS=Streptococcus sanguin... [more]
RL15_STRA52.034e-2141.2950S ribosomal protein L15 OS=Streptococcus agalact... [more]
RL15_STRA32.034e-2141.2950S ribosomal protein L15 OS=Streptococcus agalact... [more]
RL15_STRA12.034e-2141.2950S ribosomal protein L15 OS=Streptococcus agalact... [more]
RL15_LYSSC2.034e-2141.9450S ribosomal protein L15 OS=Lysinibacillus sphaer... [more]
RL15_STRTD3.470e-2140.6550S ribosomal protein L15 OS=Streptococcus thermop... [more]
RL15_BACHD3.470e-2143.6250S ribosomal protein L15 OS=Bacillus halodurans G... [more]
RL15_LISMO4.532e-2142.9550S ribosomal protein L15 OS=Listeria monocytogene... [more]
RL15_LISMH4.532e-2142.9550S ribosomal protein L15 OS=Listeria monocytogene... [more]
RL15_LISMF4.532e-2142.9550S ribosomal protein L15 OS=Listeria monocytogene... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11B06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11B06-D11-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671452 ID=CX671452; Name=CX671452; organism=Citrus sinensis; type=EST; length=883bp
TTTTTTTTCATCAAATGGTGATCTAATCAACATAATAACTGAGATTTGGC
TTTCCAGCTAAGTAACATGAGAATCAGAACATTGAGAGTTTAGCTGAATT
TTTAAAAGGGAGGGGATACAAAGAAGAGACAAATTCCAGAAATTACAGCT
ATAGACATCCTCCTCTCATTTCGCTACCCCGAAAACCTAAAACCAGAGAA
AAAGAATCGAAGACAATTCAATGGCTCTACTTAGTTACAGTGAGTGAAAA
AAACCAAGTGGTTCAAGCTGAAGTTGAATCGGATGCAGCTGCAGCAGCTC
TCTTCTTGGCGAAGTATTCTTCAGCTCGTGCAAGGTTCTTAGCTACTGAT
GGTTTCACCCACTTCTTTCGGCCAGGTAAGACAGTGAGGGTACAGCCTGC
AGCTTCAAGCTTCTCCTTTGCTGATGTAGAGAAGGCACGAGCCTTGAAGT
TCAGCTTCTTGCTTAATTCTCCATCACCAAGAATCTTTAAAGGCAGTTTC
CTTTCTCTTCCTGAGGGATTGATCAAGCCCTTCTTCTTCAAAGTCTCTAG
TGAGACTTCATCCCCCTCTAGAAAACCAGCTGCTTCTATGTCTTTCAAGT
TAACAGGGACATACTTAGGTAACCCAGCATGCATACCTCCGGCAATCCCA
CGGAGCTTAGGAATTCGACGATAAAGAGGCATTTGACCACCTTCAAAACC
CTTTCTAACGCCAGGACCAGACCTCGATTTCTGACCTCTCATTCCAAACC
CACAGCTGTTACCTTGCCCAGCTGCTATTCCTCTCCCCTTTCTCTTCCCT
CTCTTTCTCGAACCCGGTTGTGGGCCCAGGTTATTTAACCGGAACCGTAC
ATTCGTAACGGGACCCGAACCAACAGTTGCTGA
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