CX671452

Overview
NameCX671452
Unique NameCX671452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_LISMC (50S ribosomal protein L15 OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=rplO PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 64/149 (42.95%), Postives = 85/149 (57.05%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            +L+ L P  GS         G  +G G + G G +GQK+RSG GVR GFEGGQ+PL+RRIPK     G  +    ++  VNL  +    F +G EV+ E L + G+I    R  K  +KIL +G + KKL  KA  FS +AKE +EAAG
Sbjct:    2 KLHELKPSEGSRKERNRVGRGTGSGNGKTSGRGHKGQKARSGGGVRLGFEGGQLPLFRRIPK----RGFTNINRKEFAIVNLDVLNR--FEDGTEVTPELLVETGII----RNEKSGIKILSNGNIEKKLTVKANKFSAAAKEAIEAAG 140          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_EXISA (50S ribosomal protein L15 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=rplO PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 65/155 (41.94%), Postives = 90/155 (58.06%), Query Frame = -1
Query:  377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841
            +L+ L P PGS         G+A G G + G G +GQK+RSG GVR GFEGGQ PLYRR+PK     G  +    +Y  V+L  +    F  G EV+ E L + G+++ +    K  +K+L +G+L  KL  KA  FS +AKE +EAAG T+ V+
Sbjct:    2 KLHELKPTPGSRHERNRVGRGMATGNGKTSGRGHKGQKARSGGGVRPGFEGGQNPLYRRLPK----RGFNNPTRKEYAVVSLDTLNR--FEAGTEVTPELLIETGVVSSA----KDGIKVLANGKLETKLTVKANKFSGAAKEAIEAAGGTVEVI 146          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_CLOK5 (50S ribosomal protein L15 OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=rplO PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 65/155 (41.94%), Postives = 92/155 (59.35%), Query Frame = -1
Query:  377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841
            +L+ L P  GS         G  +G G + G G +GQK+R+G GVR GFEGGQMPLYRR+PK     G  +    +Y  +N++ +    F +G E++ E L +K +I    R+ K  LKILG+GEL KKL  KA  F+ +A +K+EAAG  + V+
Sbjct:    2 KLHELKPAEGSRKSRKRIGRGTGSGLGRNAGKGEKGQKARAGGGVRIGFEGGQMPLYRRVPK----RGFTNIFAKQYSELNVERLNI--FEDGTEITPELLIEKRMI----RKSKDGLKILGNGELQKKLTVKAVKFTKAAAQKIEAAGGKVEVI 146          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_CLOK1 (50S ribosomal protein L15 OS=Clostridium kluyveri (strain NBRC 12016) GN=rplO PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.532e-21
Identity = 65/155 (41.94%), Postives = 92/155 (59.35%), Query Frame = -1
Query:  377 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAGCTLTVL 841
            +L+ L P  GS         G  +G G + G G +GQK+R+G GVR GFEGGQMPLYRR+PK     G  +    +Y  +N++ +    F +G E++ E L +K +I    R+ K  LKILG+GEL KKL  KA  F+ +A +K+EAAG  + V+
Sbjct:    2 KLHELKPAEGSRKSRKRIGRGTGSGLGRNAGKGEKGQKARAGGGVRIGFEGGQMPLYRRVPK----RGFTNIFAKQYSELNVERLNI--FEDGTEITPELLIEKRMI----RKSKDGLKILGNGELQKKLTVKAVKFTKAAAQKIEAAGGKVEVI 146          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_STAAW (50S ribosomal protein L15 OS=Staphylococcus aureus (strain MW2) GN=rplO PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 62/149 (41.61%), Postives = 84/149 (56.38%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            +L+ L P  GS         G+A G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+G L KKL  KA  FS SA E ++A G
Sbjct:    2 KLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKG 140          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_STAAT (50S ribosomal protein L15 OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=rplO PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 62/149 (41.61%), Postives = 84/149 (56.38%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            +L+ L P  GS         G+A G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+G L KKL  KA  FS SA E ++A G
Sbjct:    2 KLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKG 140          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_STAAS (50S ribosomal protein L15 OS=Staphylococcus aureus (strain MSSA476) GN=rplO PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 62/149 (41.61%), Postives = 84/149 (56.38%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            +L+ L P  GS         G+A G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+G L KKL  KA  FS SA E ++A G
Sbjct:    2 KLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKG 140          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_STAAR (50S ribosomal protein L15 OS=Staphylococcus aureus (strain MRSA252) GN=rplO PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 62/149 (41.61%), Postives = 84/149 (56.38%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            +L+ L P  GS         G+A G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+G L KKL  KA  FS SA E ++A G
Sbjct:    2 KLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKG 140          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_STAAN (50S ribosomal protein L15 OS=Staphylococcus aureus (strain N315) GN=rplO PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 62/149 (41.61%), Postives = 84/149 (56.38%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            +L+ L P  GS         G+A G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+G L KKL  KA  FS SA E ++A G
Sbjct:    2 KLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKG 140          
BLAST of CX671452 vs. ExPASy Swiss-Prot
Match: RL15_STAAM (50S ribosomal protein L15 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rplO PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.919e-21
Identity = 62/149 (41.61%), Postives = 84/149 (56.38%), Query Frame = -1
Query:  395 RLNNLGPQPGSXXXXXXXXXGIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPLKILGDGELSKKLNFKARAFSTSAKEKLEAAG 841
            +L+ L P  GS         G+A G G + G G +GQK+RSG GVR GFEGGQ+PL+RR+PK     G  +    +Y  VNL  +    F +G EV+   L + G++    +  K  +KILG+G L KKL  KA  FS SA E ++A G
Sbjct:    2 KLHELKPAEGSRKERNRVGRGVATGNGKTSGRGHKGQKARSGGGVRPGFEGGQLPLFRRLPK----RGFTNINRKEYAIVNLDQLNK--FEDGTEVTPALLVESGVV----KNEKSGIKILGNGSLDKKLTVKAHKFSASAAEAIDAKG 140          
The following BLAST results are available for this feature:
BLAST of CX671452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL15_LISMC4.532e-2142.9550S ribosomal protein L15 OS=Listeria monocytogene... [more]
RL15_EXISA4.532e-2141.9450S ribosomal protein L15 OS=Exiguobacterium sp. (... [more]
RL15_CLOK54.532e-2141.9450S ribosomal protein L15 OS=Clostridium kluyveri ... [more]
RL15_CLOK14.532e-2141.9450S ribosomal protein L15 OS=Clostridium kluyveri ... [more]
RL15_STAAW5.919e-2141.6150S ribosomal protein L15 OS=Staphylococcus aureus... [more]
RL15_STAAT5.919e-2141.6150S ribosomal protein L15 OS=Staphylococcus aureus... [more]
RL15_STAAS5.919e-2141.6150S ribosomal protein L15 OS=Staphylococcus aureus... [more]
RL15_STAAR5.919e-2141.6150S ribosomal protein L15 OS=Staphylococcus aureus... [more]
RL15_STAAN5.919e-2141.6150S ribosomal protein L15 OS=Staphylococcus aureus... [more]
RL15_STAAM5.919e-2141.6150S ribosomal protein L15 OS=Staphylococcus aureus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11B06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11B06-D11-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671452 ID=CX671452; Name=CX671452; organism=Citrus sinensis; type=EST; length=883bp
TTTTTTTTCATCAAATGGTGATCTAATCAACATAATAACTGAGATTTGGC
TTTCCAGCTAAGTAACATGAGAATCAGAACATTGAGAGTTTAGCTGAATT
TTTAAAAGGGAGGGGATACAAAGAAGAGACAAATTCCAGAAATTACAGCT
ATAGACATCCTCCTCTCATTTCGCTACCCCGAAAACCTAAAACCAGAGAA
AAAGAATCGAAGACAATTCAATGGCTCTACTTAGTTACAGTGAGTGAAAA
AAACCAAGTGGTTCAAGCTGAAGTTGAATCGGATGCAGCTGCAGCAGCTC
TCTTCTTGGCGAAGTATTCTTCAGCTCGTGCAAGGTTCTTAGCTACTGAT
GGTTTCACCCACTTCTTTCGGCCAGGTAAGACAGTGAGGGTACAGCCTGC
AGCTTCAAGCTTCTCCTTTGCTGATGTAGAGAAGGCACGAGCCTTGAAGT
TCAGCTTCTTGCTTAATTCTCCATCACCAAGAATCTTTAAAGGCAGTTTC
CTTTCTCTTCCTGAGGGATTGATCAAGCCCTTCTTCTTCAAAGTCTCTAG
TGAGACTTCATCCCCCTCTAGAAAACCAGCTGCTTCTATGTCTTTCAAGT
TAACAGGGACATACTTAGGTAACCCAGCATGCATACCTCCGGCAATCCCA
CGGAGCTTAGGAATTCGACGATAAAGAGGCATTTGACCACCTTCAAAACC
CTTTCTAACGCCAGGACCAGACCTCGATTTCTGACCTCTCATTCCAAACC
CACAGCTGTTACCTTGCCCAGCTGCTATTCCTCTCCCCTTTCTCTTCCCT
CTCTTTCTCGAACCCGGTTGTGGGCCCAGGTTATTTAACCGGAACCGTAC
ATTCGTAACGGGACCCGAACCAACAGTTGCTGA
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