FC871759

Overview
NameFC871759
Unique NameFC871759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
AbsCFruit1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC871759 vs. ExPASy Swiss-Prot
Match: ENPL_DICDI (Endoplasmin homolog OS=Dictyostelium discoideum GN=grp94 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.393e-17
Identity = 44/97 (45.36%), Postives = 59/97 (60.82%), Query Frame = 1
Query:    1 SVLLNKFGVGFYSVYLVADYVEVISKHNDDKQYVWESKADGAFAISEDTWNEPLGRGTEIKLHLRDEAGXXXXXXXXXXXXXXXXXFINFPIYIWAS 291
            S L+ +FGVGFYS++LVAD V V SK NDD QYVW S +  ++ I++D     LGRGT I LH++D++                  FINFPIY++ S
Sbjct:  163 SNLIGQFGVGFYSLFLVADSVVVTSKSNDDDQYVWTSDSQSSYTIAKDPKGNTLGRGTRISLHIKDDSKEFLDQEVIKQLVKKYSQFINFPIYLYVS 259          

HSP 2 Score: 85.5001 bits (210), Expect = 3.432e-16
Identity = 39/92 (42.39%), Postives = 62/92 (67.39%), Query Frame = 1
Query:  481 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDEL 756
            LND K +W++  K+VT+EEY +F+ SL K  + + P+ +SHF  EGD EF+++L++P   P ++++       + LKL+VRRVFI+D   EL
Sbjct:  316 LNDSKPLWMKAAKDVTKEEYTEFFRSLSK--TQDTPITYSHFKTEGDTEFRSILYIPENPPSNMFD--LEAAGSGLKLFVRRVFITDNLKEL 403          
BLAST of FC871759 vs. ExPASy Swiss-Prot
Match: HTPG_GEOSL (Chaperone protein htpG OS=Geobacter sulfurreducens GN=htpG PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.032e-17
Identity = 46/92 (50.00%), Postives = 61/92 (66.30%), Query Frame = 1
Query:  481 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDEL 756
            LN +KAIW R+  EVTEEEY +FY  +  DF  EKPL   H++AEG  EFKA+L++P   P DL   +    K  ++LYVRRVFI+D  ++L
Sbjct:  240 LNSMKAIWTRSKSEVTEEEYEEFYKHVSHDF--EKPLKTIHYSAEGTSEFKALLYLPAHKPFDL---FMPERKKGVQLYVRRVFITDSCEQL 326          
BLAST of FC871759 vs. ExPASy Swiss-Prot
Match: HTPG_AERS4 (Chaperone protein htpG OS=Aeromonas salmonicida (strain A449) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.180e-16
Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 1
Query:  481 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDE 753
            +N   A+W RNPKE+ +EEY +FY  +  DF D  PL W H   EG  E+ ++L+VP +AP DLY       K  LKLYV+RVFI D+ ++
Sbjct:  238 VNRATALWTRNPKEIKDEEYQEFYKHVAHDFED--PLLWGHNRVEGAQEYTSLLYVPARAPFDLYN---REQKHGLKLYVQRVFIMDDAEQ 323          
BLAST of FC871759 vs. ExPASy Swiss-Prot
Match: HTPG_AERHH (Chaperone protein htpG OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=htpG PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.180e-16
Identity = 42/91 (46.15%), Postives = 57/91 (62.64%), Query Frame = 1
Query:  481 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDE 753
            +N   A+W RNPKE+ +EEY +FY  +  DF D  PL W H   EG  E+ ++L+VP +AP DLY       K  LKLYV+RVFI D+ ++
Sbjct:  242 VNRATALWTRNPKEIKDEEYQEFYKHVAHDFED--PLLWGHNRVEGAQEYTSLLYVPARAPFDLYN---RDQKHGLKLYVQRVFIMDDAEQ 327          
BLAST of FC871759 vs. ExPASy Swiss-Prot
Match: HTPG_PELPD (Chaperone protein htpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.541e-16
Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 1
Query:  481 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDEL 756
            LN +KAIW R   EVTEEEY +FY  +  DF  E P    HF+AEG  EFKA++++P K P DL+ +     K  L+LYV+RVFI+D  +EL
Sbjct:  239 LNSMKAIWARPKSEVTEEEYQEFYKHISHDF--ENPFNTIHFSAEGISEFKALIYLPAKKPFDLFMA---DRKKGLQLYVKRVFITDRCEEL 325          
BLAST of FC871759 vs. ExPASy Swiss-Prot
Match: HTPG_ACISJ (Chaperone protein htpG OS=Acidovorax sp. (strain JS42) GN=htpG PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.012e-16
Identity = 41/92 (44.57%), Postives = 58/92 (63.04%), Query Frame = 1
Query:  481 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDEL 756
            +N   A+W R  K++T+E+Y  FY S+  DF  E PL WSH   EG+ E+  +L++P KAP DL+       KA +KLYV+RVFI D+ + L
Sbjct:  235 VNKASALWTRPKKDITDEQYQDFYKSISHDF--ENPLTWSHNRVEGNTEYTQLLYIPAKAPFDLWN---RDKKAGVKLYVKRVFIMDDAESL 321          
BLAST of FC871759 vs. ExPASy Swiss-Prot
Match: HTPG_ACIAD (Chaperone protein htpG OS=Acinetobacter sp. (strain ADP1) GN=htpG PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.628e-16
Identity = 40/93 (43.01%), Postives = 60/93 (64.52%), Query Frame = 1
Query:  478 LLNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDEL 756
            ++N   A+W R+  E++EE+Y +FY +L  DF  + PLAWSH   EG+ E+  +L++P KA  D++       KA +KLYV+RVFI D+ D L
Sbjct:  242 VINSASALWTRSKNEISEEQYIEFYKNLTHDF--DAPLAWSHNRVEGNTEYTQLLYIPAKASSDIFT---REAKAGIKLYVKRVFIMDDADNL 329          
BLAST of FC871759 vs. ExPASy Swiss-Prot
Match: HTPG_SHISS (Chaperone protein htpG OS=Shigella sonnei (strain Ss046) GN=htpG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.432e-16
Identity = 39/91 (42.86%), Postives = 60/91 (65.93%), Query Frame = 1
Query:  481 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDE 753
            +N  +A+W RN  E+T+EEY +FY  +  DF+D  PL WSH   EG  E+ ++L++P +AP D++      +K  LKLYV+RVFI D+ ++
Sbjct:  227 INKAQALWTRNKSEITDEEYKEFYKHIAHDFND--PLTWSHNRVEGKQEYTSLLYIPSQAPWDMWN---RDHKHGLKLYVQRVFIMDDAEQ 312          
BLAST of FC871759 vs. ExPASy Swiss-Prot
Match: HTPG_SHIFL (Chaperone protein htpG OS=Shigella flexneri GN=htpG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.432e-16
Identity = 39/91 (42.86%), Postives = 60/91 (65.93%), Query Frame = 1
Query:  481 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDE 753
            +N  +A+W RN  E+T+EEY +FY  +  DF+D  PL WSH   EG  E+ ++L++P +AP D++      +K  LKLYV+RVFI D+ ++
Sbjct:  227 INKAQALWTRNKSEITDEEYKEFYKHIAHDFND--PLTWSHNRVEGKQEYTSLLYIPSQAPWDMWN---RDHKHGLKLYVQRVFIMDDAEQ 312          
BLAST of FC871759 vs. ExPASy Swiss-Prot
Match: HTPG_SHIDS (Chaperone protein htpG OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=htpG PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.432e-16
Identity = 39/91 (42.86%), Postives = 60/91 (65.93%), Query Frame = 1
Query:  481 LNDVKAIWLRNPKEVTEEEYAKFYHSLVKDFSDEKPLAWSHFNAEGDVEFKAVLFVPPKAPHDLYESYYNTNKANLKLYVRRVFISDEFDE 753
            +N  +A+W RN  E+T+EEY +FY  +  DF+D  PL WSH   EG  E+ ++L++P +AP D++      +K  LKLYV+RVFI D+ ++
Sbjct:  227 INKAQALWTRNKSEITDEEYKEFYKHIAHDFND--PLTWSHNRVEGKQEYTSLLYIPSQAPWDMWN---RDHKHGLKLYVQRVFIMDDAEQ 312          
The following BLAST results are available for this feature:
BLAST of FC871759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 313
Match NameE-valueIdentityDescription
ENPL_DICDI1.393e-1745.36Endoplasmin homolog OS=Dictyostelium discoideum GN... [more]
HTPG_GEOSL9.032e-1750.00Chaperone protein htpG OS=Geobacter sulfurreducens... [more]
HTPG_AERS41.180e-1646.15Chaperone protein htpG OS=Aeromonas salmonicida (s... [more]
HTPG_AERHH1.180e-1646.15Chaperone protein htpG OS=Aeromonas hydrophila sub... [more]
HTPG_PELPD1.541e-1650.00Chaperone protein htpG OS=Pelobacter propionicus (... [more]
HTPG_ACISJ2.012e-1644.57Chaperone protein htpG OS=Acidovorax sp. (strain J... [more]
HTPG_ACIAD2.628e-1643.01Chaperone protein htpG OS=Acinetobacter sp. (strai... [more]
HTPG_SHISS3.432e-1642.86Chaperone protein htpG OS=Shigella sonnei (strain ... [more]
HTPG_SHIFL3.432e-1642.86Chaperone protein htpG OS=Shigella flexneri GN=htp... [more]
HTPG_SHIDS3.432e-1642.86Chaperone protein htpG OS=Shigella dysenteriae ser... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK3BD01FM1 AbsCFruit1 Citrus sinensis cDNA clone KN0AAK3BD01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC871759 ID=FC871759; Name=FC871759; organism=Citrus sinensis; type=EST; length=757bp
TCAGTCCTCCTTAATAAATTTGGTGTTGGTTTTTATTCTGTATATCTTGT
TGCTGACTATGTTGAAGTCATTAGCAAACATAATGATGACAAACAGTATG
TATGGGAATCAAAGGCTGATGGAGCATTTGCAATTTCTGAGGACACATGG
AATGAGCCACTAGGACGCGGAACCGAGATTAAATTGCACCTCAGAGATGA
AGCTGGGGAGTACTTGGAAGAGAGCAAGTTGAAGGAGTTGGTGAAGAAAT
ATTCTGAATTTATCAACTTCCCCATCTATATCTGGGCCAGCAAAGAGGTT
GATGTGGATGTTCCTGCTGACGAGGATGACTCAAGTGATGAAGAGGAGAA
AGCCGAAAAAGAAGAAGAAACGGAAAAAAGTGAAAGTGAAAGTGAAAGTG
AAGATGAAGATGAAGATGAAGATTCTGAGAAAAAGCCAAAGACCAAGACA
GTGAAGGAAACTACTTATGAGTGGGAGCTCTTGAACGATGTAAAGGCTAT
ATGGCTGCGGAATCCAAAGGAAGTGACAGAGGAAGAGTACGCCAAATTCT
ATCACTCTTTAGTAAAGGATTTTAGTGATGAGAAGCCCTTAGCATGGAGT
CACTTCAATGCTGAAGGCGATGTTGAGTTTAAGGCTGTTTTGTTTGTGCC
TCCAAAGGCTCCTCATGATCTTTATGAGAGTTATTATAACACCAATAAGG
CCAACTTGAAGTTGTATGTTAGAAGGGTCTTCATCTCTGATGAATTTGAT
GAGCTTT
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