EY692465

Overview
NameEY692465
Unique NameEY692465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB2_BURCH (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Burkholderia cenocepacia (strain HI2424) GN=ssuB2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.262e-15
Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = -3
Query:   55 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAF 303
            YG  ++L    LQ+  GE+V ++GPSG GK  LLR++AG      GS+ L G  L GP  RV V FQ+P LLPWLS+  NV F
Sbjct:   27 YGDRTILSDIALQVARGEIVCVVGPSGCGKSTLLRIVAGLDPDFRGSVTLDGSALAGPSARVGVIFQEPRLLPWLSIADNVGF 109          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB2_BURCA (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Burkholderia cenocepacia (strain AU 1054) GN=ssuB2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.262e-15
Identity = 41/83 (49.40%), Postives = 52/83 (62.65%), Query Frame = -3
Query:   55 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAF 303
            YG  ++L    LQ+  GE+V ++GPSG GK  LLR++AG      GS+ L G  L GP  RV V FQ+P LLPWLS+  NV F
Sbjct:   27 YGDRTILSDIALQVARGEIVCVVGPSGCGKSTLLRIVAGLDPDFRGSVTLDGSALAGPSARVGVIFQEPRLLPWLSIADNVGF 109          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB1_XANAC (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Xanthomonas axonopodis pv. citri GN=ssuB1 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.262e-15
Identity = 50/114 (43.86%), Postives = 62/114 (54.39%), Query Frame = -3
Query:    7 SMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEERR 348
            S S   LH  G    +G   VL   DLQL PGE+VS++G SG GK  LLR+LAG      G + L G  + G   ++   FQ+P LLPWL +  NVA    FA +A LSP   R
Sbjct:    2 SSSGLQLHIAG--KRFGTRQVLRDIDLQLAPGEIVSLIGASGCGKSTLLRILAGLERDYAGEVALDGARVRGVDRQIGFIFQEPRLLPWLDVAANVA----FADEADLSPAAAR 109          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB_RALSO (Aliphatic sulfonates import ATP-binding protein ssuB OS=Ralstonia solanacearum GN=ssuB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.649e-15
Identity = 50/117 (42.74%), Postives = 62/117 (52.99%), Query Frame = -3
Query:   31 AVAHRVEPSGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKA 381
            A   RV P G ++   + HA      YG   VL G DL++ PGE V+I+G SG GK  LLR++AG     GGS+H  G    G H    V FQD  LLPW  +  NVA GL    +A
Sbjct:    9 AALERVAPRGTALR--IAHA---VKRYGEREVLYGIDLEIAPGEFVAIVGRSGCGKSTLLRLIAGLEGIDGGSLHRDGAAGGGLHDDARVMFQDARLLPWKRVLDNVALGLPRTHRA 120          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB3_BURXL (Taurine import ATP-binding protein tauB 3 OS=Burkholderia xenovorans (strain LB400) GN=tauB3 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.153e-15
Identity = 47/100 (47.00%), Postives = 58/100 (58.00%), Query Frame = -3
Query:   43 AVLHAQGICLGYGGNSV--LEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDF 336
            + L  +G+ + Y G S   LEG DLQ++ GE V  LG SG GK  LL  LAGF  P  G   L GEP+ GP     V FQ  +L+PWL++  NVA GL F
Sbjct:    2 STLEIRGLGVTYEGASTAALEGVDLQIESGEFVVALGASGCGKTTLLNCLAGFIDPTAGCARLNGEPIAGPGAERGVVFQKYALMPWLNVIDNVALGLRF 101          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB1_RHIL3 (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ssuB1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 2.812e-15
Identity = 42/114 (36.84%), Postives = 58/114 (50.88%), Query Frame = -3
Query:   49 EPGAVAHRVEPSGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 390
            E  A A    P+    + A +   G+   +GGN VL G +L +  G+ V+++G SG GK  LLR+L G   P  G +H          P   + FQ+P LLPWLS+  NV  GL
Sbjct:   14 EEPAYARENAPAVSRSAPAAISLTGLEKSFGGNRVLRGINLHIPAGQFVAVIGKSGCGKSTLLRILMGLDEPSAGELHFEDADGAQASPNARIVFQEPRLLPWLSVADNVVVGL 127          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_PSEF5 (Taurine import ATP-binding protein tauB OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=tauB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14
Identity = 48/111 (43.24%), Postives = 60/111 (54.05%), Query Frame = -3
Query:   10 AVLHAQGICLGYGGNS--VLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEER 336
            A+L  + I   Y G +  VL    L L P +++  LGPSG GK  LL ++AGF  P  G I L G P+ GP     V FQD +LLPW  +  NVAFGL+ A  A    E R
Sbjct:    2 ALLQLERISAQYPGAAEPVLADISLTLGPQQLLVALGPSGSGKTSLLNLIAGFVEPSAGRIQLDGVPVQGPSAERGVVFQDDALLPWQDVLGNVAFGLELAGVARDKREAR 112          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_PSE14 (Taurine import ATP-binding protein tauB OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=tauB PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.069e-14
Identity = 48/111 (43.24%), Postives = 62/111 (55.86%), Query Frame = -3
Query:   10 AVLHAQGICLGYGGNS--VLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEER 336
            A+L  + I   Y G +  VL   +L L P +++  LGPSG GK  LL ++AGF  P  G I L G P+ GP     V FQD +LLPW ++  NVAFGL+ A    L  E R
Sbjct:    2 ALLQLERIGAQYPGAAAPVLADINLSLGPQQLLVALGPSGSGKTSLLNLIAGFIKPGSGRITLDGIPVEGPSAERGVVFQDDALLPWQNVLANVAFGLELAGVGRLERETR 112          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: Y4187_BRUSU (Putative ATP-binding protein BRA1187 OS=Brucella suis GN=BRA1187 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.823e-14
Identity = 38/101 (37.62%), Postives = 57/101 (56.44%), Query Frame = -3
Query:   13 ICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEE 315
            + + YGG   L+  +L +  GE V+++GPSG GK   + + AG   P GG I +  +P+ GP P   V FQ  +L PWL++ +NV FGL  A  + +   E
Sbjct:   10 VVMRYGGFLALDRLNLDIADGEFVTVVGPSGCGKSTAMNIAAGLLQPSGGEILVGDKPVTGPGPERGVIFQQYALFPWLTVRQNVEFGLSVAGMSRVKRRE 110          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: Y3647_BRUA2 (Putative ATP-binding protein BAB2_1147 OS=Brucella abortus (strain 2308) GN=BAB2_1147 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.823e-14
Identity = 38/101 (37.62%), Postives = 57/101 (56.44%), Query Frame = -3
Query:   13 ICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEE 315
            + + YGG   L+  +L +  GE V+++GPSG GK   + + AG   P GG I +  +P+ GP P   V FQ  +L PWL++ +NV FGL  A  + +   E
Sbjct:   10 VVMRYGGFLALDRLNLDIADGEFVTVVGPSGCGKSTAMNIAAGLLQPSGGEILVGDKPVTGPGPERGVIFQQYALFPWLTVRQNVEFGLSVAGMSRVKRRE 110          
The following BLAST results are available for this feature:
BLAST of EY692465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
SSUB2_BURCH1.262e-1549.40Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB2_BURCA1.262e-1549.40Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB1_XANAC1.262e-1543.86Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB_RALSO1.649e-1542.74Aliphatic sulfonates import ATP-binding protein ss... [more]
TAUB3_BURXL2.153e-1547.00Taurine import ATP-binding protein tauB 3 OS=Burkh... [more]
SSUB1_RHIL32.812e-1536.84Aliphatic sulfonates import ATP-binding protein ss... [more]
TAUB_PSEF51.069e-1443.24Taurine import ATP-binding protein tauB OS=Pseudom... [more]
TAUB_PSE141.069e-1443.24Taurine import ATP-binding protein tauB OS=Pseudom... [more]
Y4187_BRUSU1.823e-1437.62Putative ATP-binding protein BRA1187 OS=Brucella s... [more]
Y3647_BRUA21.823e-1437.62Putative ATP-binding protein BAB2_1147 OS=Brucella... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692465 ID=EY692465; Name=EY692465; organism=Citrus sinensis; type=EST; length=563bp
CCGGTTGCGTCGTTCTTCAGGACTGAGGTGCGCTTTTCGGGCAAAGTCCA
GGCCAAAGGCGACGTTCTTTTCCAGGCTCAACCACGGCAACAGGCTGGGG
TCCTGGAACGCCACCGCCACCCGCGGATGCGGGCCATTCAACGGCTCGCC
CAGCAGGTGAATGCTGCCGCCCTGGGGCGCCGGAAAACCGGCAAGCACCC
GCAGCAGGTGGAACTTGCCAACGCCGCTGGGGCCGAGGATCGACACCACT
TCGCCGGGCTGCAATTGCAGGTCGAACCCTTCCAGCACCGAGTTGCCCCC
ATAGCCCAGGCAAATTCCCTGGGCATGCAGTACCGCCTGGCTCATAGATT
GGCCTGACGGTTCAACTCGGTGCGCAACTGCACCAGGCTCGGGGTCACGA
TCGGCACAAACGCCGACTCGCGCCAACGCCGGGCGAAACCGCTGCCGTGG
GCAGTCACGTAGGCCTTGCCGCCGCTGGCTTGCAGCTCCCCTTGGACGGG
GCTGGGGGCAATTTCTTCGAGAGCAATGCGCAAGGCGGAACAACGGTACC
GGCTCGGTCCCGA
back to top