EY692465

Overview
NameEY692465
Unique NameEY692465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: Y3423_BRUAB (Putative ATP-binding protein BruAb2_1123 OS=Brucella abortus GN=BruAb2_1123 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.823e-14
Identity = 38/101 (37.62%), Postives = 57/101 (56.44%), Query Frame = -3
Query:   13 ICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEE 315
            + + YGG   L+  +L +  GE V+++GPSG GK   + + AG   P GG I +  +P+ GP P   V FQ  +L PWL++ +NV FGL  A  + +   E
Sbjct:   10 VVMRYGGFLALDRLNLDIADGEFVTVVGPSGCGKSTAMNIAAGLLQPSGGEILVGDKPVTGPGPERGVIFQQYALFPWLTVRQNVEFGLSVAGMSRVKRRE 110          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_PSEPF (Taurine import ATP-binding protein tauB OS=Pseudomonas fluorescens (strain Pf0-1) GN=tauB PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 2.380e-14
Identity = 47/111 (42.34%), Postives = 60/111 (54.05%), Query Frame = -3
Query:   10 AVLHAQGICLGYGGNS--VLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEER 336
            A+L  + I   Y G+   VL    L L P +++  LGPSG GK  LL ++AGF  P  G I L   P+ GP     V FQD +LLPW  +  NVAFGL+ A  A    E+R
Sbjct:    2 ALLQLERISAQYPGSPEPVLSDISLTLGPQQLLVALGPSGSGKTSLLNLIAGFVEPSAGRITLDNVPVKGPSAERGVVFQDDALLPWQDVLANVAFGLELAGVAKDKREQR 112          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB_RALME (Aliphatic sulfonates import ATP-binding protein ssuB OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=ssuB PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.109e-14
Identity = 44/100 (44.00%), Postives = 57/100 (57.00%), Query Frame = -3
Query:   31 LHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKA 330
            LH + +   Y G  VL G +L+  PGE V+I+G SG GK  LLR++AG  +   G++ L G+P  G    V V FQD  LLPW  +  NVA GL   R A
Sbjct:   40 LHVEQVVKRYNGREVLHGVNLRAAPGEFVAIVGRSGCGKSTLLRLVAGLESADAGAVALDGQP-GGTPSSVRVMFQDARLLPWKRVLDNVAIGLPRERHA 138          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB_CORGL (Aliphatic sulfonates import ATP-binding protein ssuB OS=Corynebacterium glutamicum GN=ssuB PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.109e-14
Identity = 41/92 (44.57%), Postives = 55/92 (59.78%), Query Frame = -3
Query:   46 QGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLD 321
            +G+   YG   VL+G DL +  GEV +++G SG GK  +LRVLAG      GS+ + G P        AVAFQ+P LLPW ++  NV FGL+
Sbjct:   14 RGLRKSYGTKEVLQGIDLTINCGEVTALIGRSGSGKSTILRVLAGLSKEHSGSVEISGNP--------AVAFQEPRLLPWKTVLDNVTFGLN 97          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB1_PSE14 (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=ssuB1 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 3.109e-14
Identity = 41/87 (47.13%), Postives = 57/87 (65.52%), Query Frame = -3
Query:   46 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSI-HLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLD 303
            + GN+VL+  DL LQ GE+VS+LGPSG GK  LLR++AG      GS+ ++ GE        VA  FQ+P L+PWL++E+N+ F  D
Sbjct:   15 FAGNTVLQDIDLSLQSGEIVSLLGPSGCGKSTLLRIVAGLEQDFRGSVDNIEGE--------VAFVFQEPRLMPWLTVEQNIGFSDD 93          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB1_PSEU2 (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Pseudomonas syringae pv. syringae (strain B728a) GN=ssuB1 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 4.060e-14
Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = -3
Query:   46 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLD 303
            + GN+VL G DL LQ GE+VS+LGPSG GK  LLR++AG      GS+  +          VA  FQ+P L+PWL++ +N+ F  D
Sbjct:   15 FAGNTVLHGIDLSLQSGEIVSLLGPSGCGKSTLLRIVAGLEQDFRGSVQRI-------QGEVAFVFQEPRLMPWLTVAQNIGFSDD 93          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB_RHOPA (Aliphatic sulfonates import ATP-binding protein ssuB OS=Rhodopseudomonas palustris GN=ssuB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.303e-14
Identity = 49/129 (37.98%), Postives = 63/129 (48.84%), Query Frame = -3
Query:   10 DPEPGAVAHRVEPSGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEER 396
            DP    +     PS    S   L  +G+   +G N VL G DL +  G+ V+I+G SG GK  LLR++AG   P  G I    + L G    V V FQ+P LLPW  +  NV  GL   R    SP+ R
Sbjct:   18 DPVARTIEDEPRPSQPPTSALALDIRGLRKSFGDNDVLRGIDLHIPAGQFVTIVGRSGCGKSTLLRLIAGLETPTAGHIVFGEDKLPGD---VRVMFQEPRLLPWARVLANVEVGLGTERN---SPDAR 140          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB2_XANAC (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Xanthomonas axonopodis pv. citri GN=ssuB2 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.926e-14
Identity = 45/115 (39.13%), Postives = 59/115 (51.30%), Query Frame = -3
Query:   31 AHRVEPSGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKA 375
            A R  P   + +   L  +GI   YG + VL G DL++ P   V+I+G SG GK  LLRV+AG      G++     PL      V + FQD  LLPW  +  NVA GL  A +A
Sbjct:   11 ACRATPMSAATTGLPLRVRGIAKRYGDSDVLRGIDLEIAPSACVAIVGRSGCGKSTLLRVIAGLETADVGTVDSGRAPLAAQRDAVRLMFQDARLLPWKRVIDNVALGLGRAGRA 125          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: CMPC_SYNP6 (Bicarbonate transport ATP-binding protein cmpC OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=cmpC PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.926e-14
Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = -3
Query:    7 GGNS--VLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEERR 300
            GGN    L+G DL+++ GE +S++G SG GK  LL ++AG   P  G++ L G+ +  P P   V FQ+ SL PWL++ +N+A  +D   +  L  EER+
Sbjct:   18 GGNEYLALKGIDLEIKQGEFISLIGHSGCGKSTLLNLIAGLELPTDGAVSLEGQQITAPGPDRMVVFQNYSLFPWLTVRENIALAVDEVLR-DLPKEERQ 116          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: CMPC_SYNE7 (Bicarbonate transport ATP-binding protein cmpC OS=Synechococcus elongatus (strain PCC 7942) GN=cmpC PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.926e-14
Identity = 40/100 (40.00%), Postives = 61/100 (61.00%), Query Frame = -3
Query:    7 GGNS--VLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEERR 300
            GGN    L+G DL+++ GE +S++G SG GK  LL ++AG   P  G++ L G+ +  P P   V FQ+ SL PWL++ +N+A  +D   +  L  EER+
Sbjct:   18 GGNEYLALKGIDLEIKQGEFISLIGHSGCGKSTLLNLIAGLELPTDGAVSLEGQQITAPGPDRMVVFQNYSLFPWLTVRENIALAVDEVLR-DLPKEERQ 116          
The following BLAST results are available for this feature:
BLAST of EY692465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
Y3423_BRUAB1.823e-1437.62Putative ATP-binding protein BruAb2_1123 OS=Brucel... [more]
TAUB_PSEPF2.380e-1442.34Taurine import ATP-binding protein tauB OS=Pseudom... [more]
SSUB_RALME3.109e-1444.00Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB_CORGL3.109e-1444.57Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB1_PSE143.109e-1447.13Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB1_PSEU24.060e-1445.35Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB_RHOPA5.303e-1437.98Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB2_XANAC6.926e-1439.13Aliphatic sulfonates import ATP-binding protein ss... [more]
CMPC_SYNP66.926e-1440.00Bicarbonate transport ATP-binding protein cmpC OS=... [more]
CMPC_SYNE76.926e-1440.00Bicarbonate transport ATP-binding protein cmpC OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692465 ID=EY692465; Name=EY692465; organism=Citrus sinensis; type=EST; length=563bp
CCGGTTGCGTCGTTCTTCAGGACTGAGGTGCGCTTTTCGGGCAAAGTCCA
GGCCAAAGGCGACGTTCTTTTCCAGGCTCAACCACGGCAACAGGCTGGGG
TCCTGGAACGCCACCGCCACCCGCGGATGCGGGCCATTCAACGGCTCGCC
CAGCAGGTGAATGCTGCCGCCCTGGGGCGCCGGAAAACCGGCAAGCACCC
GCAGCAGGTGGAACTTGCCAACGCCGCTGGGGCCGAGGATCGACACCACT
TCGCCGGGCTGCAATTGCAGGTCGAACCCTTCCAGCACCGAGTTGCCCCC
ATAGCCCAGGCAAATTCCCTGGGCATGCAGTACCGCCTGGCTCATAGATT
GGCCTGACGGTTCAACTCGGTGCGCAACTGCACCAGGCTCGGGGTCACGA
TCGGCACAAACGCCGACTCGCGCCAACGCCGGGCGAAACCGCTGCCGTGG
GCAGTCACGTAGGCCTTGCCGCCGCTGGCTTGCAGCTCCCCTTGGACGGG
GCTGGGGGCAATTTCTTCGAGAGCAATGCGCAAGGCGGAACAACGGTACC
GGCTCGGTCCCGA
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