EY692465

Overview
NameEY692465
Unique NameEY692465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_JANSC (Taurine import ATP-binding protein tauB OS=Jannaschia sp. (strain CCS1) GN=tauB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.632e-13
Identity = 35/83 (42.17%), Postives = 52/83 (62.65%), Query Frame = -3
Query:   52 GGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFG 300
            G    L+   L ++ GE++S+LGPSG GK  LL ++AGF AP  G I L G  ++GP+    + FQ  +L  W+S+ +NV+FG
Sbjct:   19 GSVQALQDVSLDIKQGEIMSVLGPSGCGKTTLLNIVAGFLAPTDGVIELNGHEVHGPNAERGMVFQKGALFEWMSVRENVSFG 101          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB_RALEH (Aliphatic sulfonates import ATP-binding protein ssuB OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=ssuB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.632e-13
Identity = 46/116 (39.66%), Postives = 62/116 (53.45%), Query Frame = -3
Query:   34 EPSGQSMSQA---VLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPL---NGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARK 363
            +P+ ++  +A    LH + +   Y G  VL    L + PGE ++I+G SG GK  LLR++AG  A  GGSI + GE        H  V V FQD  LLPW  +  NVA GL   R+
Sbjct:   25 QPAAEAPRKAGGVALHVRQVVKRYDGREVLHNVALDVAPGEFLAIVGRSGCGKSTLLRLVAGLEAADGGSITVDGESAAKGRARHADVRVMFQDARLLPWKRVLDNVALGLPRTRR 140          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_BURCH (Taurine import ATP-binding protein tauB OS=Burkholderia cenocepacia (strain HI2424) GN=tauB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13
Identity = 45/115 (39.13%), Postives = 58/115 (50.43%), Query Frame = -3
Query:   10 AVLHAQGICLGYGGN------SVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEER 336
            + L  + + + Y G         L   DL++  GE V  LG SG GK  LL  +AGF AP  G + + G P+ GP     V FQ  +LLPWL +  NVA GL FAR +    E R
Sbjct:    2 STLEVRQVSVAYPGERGRPTTQALAQVDLRIDAGEFVVALGASGCGKTTLLNCMAGFVAPTTGDVRVDGVPIAGPGADRGVVFQKYALLPWLDVLDNVALGLRFARVSKAEREAR 116          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_BURCA (Taurine import ATP-binding protein tauB OS=Burkholderia cenocepacia (strain AU 1054) GN=tauB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13
Identity = 45/115 (39.13%), Postives = 58/115 (50.43%), Query Frame = -3
Query:   10 AVLHAQGICLGYGGN------SVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEER 336
            + L  + + + Y G         L   DL++  GE V  LG SG GK  LL  +AGF AP  G + + G P+ GP     V FQ  +LLPWL +  NVA GL FAR +    E R
Sbjct:    2 STLEVRQVSVAYPGERGRPTTQALAQVDLRIDAGEFVVALGASGCGKTTLLNCMAGFVAPTTGDVRVDGVPIAGPGADRGVVFQKYALLPWLDVLDNVALGLRFARVSKAEREAR 116          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB2_PSESM (Aliphatic sulfonates import ATP-binding protein ssuB 2 OS=Pseudomonas syringae pv. tomato GN=ssuB2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13
Identity = 39/86 (45.35%), Postives = 56/86 (65.12%), Query Frame = -3
Query:   46 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLD 303
            + G++VL   +L LQ GE+VS+LGPSG GK  LLR++AG      GS+    E + G   +VA  FQ+P L+PWL++E+N+ F  D
Sbjct:   10 FAGHTVLHDINLSLQTGEIVSLLGPSGCGKSTLLRIVAGLEQDFRGSV----ERIQG---QVAFVFQEPRLMPWLTVEQNIGFSDD 88          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: POTA_METCA (Spermidine/putrescine import ATP-binding protein potA OS=Methylococcus capsulatus GN=potA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 3.437e-13
Identity = 41/88 (46.59%), Postives = 54/88 (61.36%), Query Frame = -3
Query:   49 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHP---RVAVAFQDPSLLPWLSLEKNVAFGL 303
            YG +  L  F+L+L+ GE++++LGPSG GK  +LR+LAG   P  G I L G  L G  P    V   FQ  +L P LS+ +NVAFGL
Sbjct:   36 YGSHCALRDFNLELREGELLTLLGPSGCGKTTVLRLLAGLEIPDSGEIFLDGRTLAGVPPEARNVNTVFQSYALFPHLSVAENVAFGL 123          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB_RALEJ (Aliphatic sulfonates import ATP-binding protein ssuB OS=Ralstonia eutropha (strain JMP134) GN=ssuB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.489e-13
Identity = 48/132 (36.36%), Postives = 64/132 (48.48%), Query Frame = -3
Query:   34 ALARVGVCADRDPEPGAVAHRVEPSGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARK 429
            ALA  G    +   P  ++   +P G       LH Q +   Y G  VL   +L   PGE V+I+G SG GK  LLR++AG      G+I L  +P       + V FQD  LLPW  + +NVA GL   R+
Sbjct:   10 ALAYAGTRLKQTDAP--LSAETQPGG-----VALHVQQVIKRYDGREVLHRIELTAAPGEFVAIVGRSGCGKSTLLRLVAGLECADEGAITLDAQPARTLQQDIRVMFQDSRLLPWKRVLENVALGLPRERR 134          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB1_RHILO (Aliphatic sulfonates import ATP-binding protein ssuB 1 OS=Rhizobium loti GN=ssuB1 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 4.489e-13
Identity = 40/91 (43.96%), Postives = 53/91 (58.24%), Query Frame = -3
Query:   49 QGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 321
            +G+   +G   VL+G DL +  G+ V+++G SG GK  LLR+LAG   P  GS+ L  E     H R    FQ+P LLPW S+ KNV  GL
Sbjct:   34 KGVEKRFGDKIVLDGIDLDVPAGQFVAVIGKSGCGKSTLLRLLAGLDRPTSGSLTLGAE--EEGHSRTRFMFQEPRLLPWASVVKNVEIGL 122          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_PSEAB (Taurine import ATP-binding protein tauB OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=tauB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.863e-13
Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = -3
Query:   49 SVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 291
            ++L    L L  GE + +LGPSG GK  LL +LAGF  P  G + + G  L GP     V FQD +L+PWL+   NVA GL
Sbjct:   21 AILRDLSLGLAKGESLVVLGPSGCGKSTLLNILAGFQTPDQGRVQIDGRTLEGPGGERGVVFQDDALMPWLNALDNVALGL 101          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: CMPC_SYNY3 (Bicarbonate transport ATP-binding protein cmpC OS=Synechocystis sp. (strain PCC 6803) GN=cmpC PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.863e-13
Identity = 38/98 (38.78%), Postives = 60/98 (61.22%), Query Frame = -3
Query:   10 GGNSV-LEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEER 300
            GG  + L+G +L+++ GE VS++G SG GK  LL ++AG   P  G + L G+ +  P P   V FQ+ SLLPWL++++N+A  +D   K   + E +
Sbjct:   19 GGEYIALKGINLEIKKGEFVSLIGHSGCGKSTLLNMIAGLDLPSEGIVTLEGQRIKQPGPDKMVIFQNYSLLPWLTVKQNIALAVDEVMKGASAAERK 116          
The following BLAST results are available for this feature:
BLAST of EY692465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
TAUB_JANSC2.632e-1342.17Taurine import ATP-binding protein tauB OS=Jannasc... [more]
SSUB_RALEH2.632e-1339.66Aliphatic sulfonates import ATP-binding protein ss... [more]
TAUB_BURCH3.437e-1339.13Taurine import ATP-binding protein tauB OS=Burkhol... [more]
TAUB_BURCA3.437e-1339.13Taurine import ATP-binding protein tauB OS=Burkhol... [more]
SSUB2_PSESM3.437e-1345.35Aliphatic sulfonates import ATP-binding protein ss... [more]
POTA_METCA3.437e-1346.59Spermidine/putrescine import ATP-binding protein p... [more]
SSUB_RALEJ4.489e-1336.36Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB1_RHILO4.489e-1343.96Aliphatic sulfonates import ATP-binding protein ss... [more]
TAUB_PSEAB5.863e-1345.68Taurine import ATP-binding protein tauB OS=Pseudom... [more]
CMPC_SYNY35.863e-1338.78Bicarbonate transport ATP-binding protein cmpC OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692465 ID=EY692465; Name=EY692465; organism=Citrus sinensis; type=EST; length=563bp
CCGGTTGCGTCGTTCTTCAGGACTGAGGTGCGCTTTTCGGGCAAAGTCCA
GGCCAAAGGCGACGTTCTTTTCCAGGCTCAACCACGGCAACAGGCTGGGG
TCCTGGAACGCCACCGCCACCCGCGGATGCGGGCCATTCAACGGCTCGCC
CAGCAGGTGAATGCTGCCGCCCTGGGGCGCCGGAAAACCGGCAAGCACCC
GCAGCAGGTGGAACTTGCCAACGCCGCTGGGGCCGAGGATCGACACCACT
TCGCCGGGCTGCAATTGCAGGTCGAACCCTTCCAGCACCGAGTTGCCCCC
ATAGCCCAGGCAAATTCCCTGGGCATGCAGTACCGCCTGGCTCATAGATT
GGCCTGACGGTTCAACTCGGTGCGCAACTGCACCAGGCTCGGGGTCACGA
TCGGCACAAACGCCGACTCGCGCCAACGCCGGGCGAAACCGCTGCCGTGG
GCAGTCACGTAGGCCTTGCCGCCGCTGGCTTGCAGCTCCCCTTGGACGGG
GCTGGGGGCAATTTCTTCGAGAGCAATGCGCAAGGCGGAACAACGGTACC
GGCTCGGTCCCGA
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