EY692465

Overview
NameEY692465
Unique NameEY692465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: UGPC1_RHIL3 (sn-glycerol-3-phosphate import ATP-binding protein ugpC 1 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ugpC1 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.658e-13
Identity = 44/115 (38.26%), Postives = 65/115 (56.52%), Query Frame = -3
Query:    1 AVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPR---VAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEERRNR 336
            A +  +G+   YG   V+ G DL +Q GE + ILGPSG GK  LLR++AG     GG I + G  +N   PR    A+ FQ+ +L P +S+ +N+ + L   + A +S  ER+ R
Sbjct:    2 APISIRGVKKNYGKTPVVHGVDLDIQSGEFIVILGPSGCGKSTLLRMIAGLEEITGGEIAIDGRVVNQLEPRERGCAMVFQNYALYPHMSVAENIGYAL---KVAGVSKAERQRR 113          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_ROSDO (Taurine import ATP-binding protein tauB OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=tauB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.658e-13
Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = -3
Query:   52 LEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFG 285
            L+   L L+ GE++S+LGPSG GK  LL ++AGF AP  G + L G  + GP     + FQ  +L  W+S+ +NVAFG
Sbjct:   24 LQDVSLDLKAGELLSVLGPSGCGKTTLLNIVAGFLAPTSGELILNGHRITGPDAERGMVFQQGALFEWMSVRENVAFG 101          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_PSEAE (Taurine import ATP-binding protein tauB OS=Pseudomonas aeruginosa GN=tauB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.658e-13
Identity = 37/81 (45.68%), Postives = 47/81 (58.02%), Query Frame = -3
Query:   49 SVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 291
            ++L    L L  GE + +LGPSG GK  LL +LAGF  P  G + + G  L GP     V FQD +L+PWL+   NVA GL
Sbjct:   21 AILRDLSLGLAKGESLVVLGPSGCGKSTLLNILAGFQKPDQGRVQIDGRTLEGPGGERGVVFQDDALMPWLNALDNVALGL 101          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_BURS3 (Taurine import ATP-binding protein tauB OS=Burkholderia sp. (strain 383) GN=tauB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 7.658e-13
Identity = 41/88 (46.59%), Postives = 50/88 (56.82%), Query Frame = -3
Query:   10 DLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEER 273
            DL++  GE V  LG SG GK  LL  +AGF AP  G + + G P+ GP     V FQ  +LLPWL +  NVA GL FAR +    E R
Sbjct:   29 DLRIDAGEFVVALGASGCGKTTLLNCMAGFVAPTTGEVCVDGVPVTGPGADRGVVFQKYALLPWLDVLDNVALGLRFARVSKAEREAR 116          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB_ANAVT (Aliphatic sulfonates import ATP-binding protein ssuB OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=ssuB PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.000e-12
Identity = 38/85 (44.71%), Postives = 51/85 (60.00%), Query Frame = -3
Query:   49 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 303
            +G  +VL   +L++ PGE ++I+G SG GK  LLR+++G   P  G I L GEPL      V V FQ+P LLPW  +  NV  GL
Sbjct:   19 FGHKTVLNSLNLEVAPGEFIAIVGRSGCGKSTLLRLVSGLDKPTTGGILLDGEPLRKLSHSVRVMFQEPRLLPWKRVIDNVGLGL 103          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB_BACSU (Aliphatic sulfonates import ATP-binding protein ssuB OS=Bacillus subtilis GN=ssuB PE=1 SV=4)

HSP 1 Score: 72.7886 bits (177), Expect = 1.306e-12
Identity = 32/83 (38.55%), Postives = 53/83 (63.86%), Query Frame = -3
Query:   46 NSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGLD 294
            N+VLE  +L + PGE ++++GPSG GK  LL+++AG  +   GS+ + G  +  P  +    FQ+  L PWL++E+N+A  L+
Sbjct:   19 NTVLENIELSIAPGEFLTLIGPSGCGKSTLLKIIAGLDSEYDGSVEINGRSVTAPGIQQGFIFQEHRLFPWLTVEQNIAADLN 101          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: POTA_MANSM (Spermidine/putrescine import ATP-binding protein potA OS=Mannheimia succiniciproducens (strain MBEL55E) GN=potA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.306e-12
Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = -3
Query:   49 SQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGE---PLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 342
            S+ ++  + +   Y  N++++ F+L +  GE ++ILGPSG GK  +LR++AGF    GG I L GE    L   H  V   FQ  +L P +++ +NVAFGL
Sbjct:    7 SKPIIELRSLKKSYNENTIIDNFNLTINNGEFLTILGPSGCGKTTVLRLIAGFEEANGGQIILDGEDVTDLPAEHRPVNTVFQSYALFPHMTIFENVAFGL 107          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: FBPC_VIBCH (Fe(3+) ions import ATP-binding protein fbpC OS=Vibrio cholerae GN=fbpC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.306e-12
Identity = 41/110 (37.27%), Postives = 63/110 (57.27%), Query Frame = -3
Query:    1 QGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNG---PHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEERRNR 321
            + IC  +G N+V+   DL+++ G +V++LGPSG GK  +LR++AG   P  G I + GE +         + + FQ  +L P +SL +NVA+GL   +   L  EE R R
Sbjct:   10 KNICKRFGSNTVIGNLDLEIKKGSLVTLLGPSGCGKTTVLRLVAGLEKPTSGQIFIDGEDVTERSIQQRDICMVFQSYALFPHMSLYENVAYGLKMLK---LPSEEVRQR 116          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: UGPC_RHOS1 (sn-glycerol-3-phosphate import ATP-binding protein ugpC OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=ugpC PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12
Identity = 40/101 (39.60%), Postives = 60/101 (59.41%), Query Frame = -3
Query:   10 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPR---VAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEER 303
            Y G  V+ G DL++  GE V I+GPSG GK  LLR++AG      G I + G  +N   PR   +A+ FQ+ +L P +++ +N+A+GL  A+ +    EER
Sbjct:   13 YAGIEVIHGVDLEIADGEFVVIVGPSGCGKSTLLRMVAGLEEITAGEIAIGGRVVNRLEPRERDIAMVFQNYALYPHMTVRENMAYGLRIAKLSKAEIEER 113          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_BURTA (Taurine import ATP-binding protein tauB OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=tauB PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = -3
Query:   49 GGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 300
            G  + LE   + +   E+V  LG SG GK  LL +LAGF  P  G + + G P+ GP     V FQD +L+PWL++  NVAFGL
Sbjct:   18 GALTALENVSMSVGGNEIVVALGASGCGKSTLLSLLAGFQPPTSGRVSVDGAPVTGPGADRGVVFQDDALMPWLNVIDNVAFGL 101          
The following BLAST results are available for this feature:
BLAST of EY692465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
UGPC1_RHIL37.658e-1338.26sn-glycerol-3-phosphate import ATP-binding protein... [more]
TAUB_ROSDO7.658e-1344.87Taurine import ATP-binding protein tauB OS=Roseoba... [more]
TAUB_PSEAE7.658e-1345.68Taurine import ATP-binding protein tauB OS=Pseudom... [more]
TAUB_BURS37.658e-1346.59Taurine import ATP-binding protein tauB OS=Burkhol... [more]
SSUB_ANAVT1.000e-1244.71Aliphatic sulfonates import ATP-binding protein ss... [more]
SSUB_BACSU1.306e-1238.55Aliphatic sulfonates import ATP-binding protein ss... [more]
POTA_MANSM1.306e-1238.61Spermidine/putrescine import ATP-binding protein p... [more]
FBPC_VIBCH1.306e-1237.27Fe(3+) ions import ATP-binding protein fbpC OS=Vib... [more]
UGPC_RHOS11.706e-1239.60sn-glycerol-3-phosphate import ATP-binding protein... [more]
TAUB_BURTA1.706e-1244.05Taurine import ATP-binding protein tauB OS=Burkhol... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692465 ID=EY692465; Name=EY692465; organism=Citrus sinensis; type=EST; length=563bp
CCGGTTGCGTCGTTCTTCAGGACTGAGGTGCGCTTTTCGGGCAAAGTCCA
GGCCAAAGGCGACGTTCTTTTCCAGGCTCAACCACGGCAACAGGCTGGGG
TCCTGGAACGCCACCGCCACCCGCGGATGCGGGCCATTCAACGGCTCGCC
CAGCAGGTGAATGCTGCCGCCCTGGGGCGCCGGAAAACCGGCAAGCACCC
GCAGCAGGTGGAACTTGCCAACGCCGCTGGGGCCGAGGATCGACACCACT
TCGCCGGGCTGCAATTGCAGGTCGAACCCTTCCAGCACCGAGTTGCCCCC
ATAGCCCAGGCAAATTCCCTGGGCATGCAGTACCGCCTGGCTCATAGATT
GGCCTGACGGTTCAACTCGGTGCGCAACTGCACCAGGCTCGGGGTCACGA
TCGGCACAAACGCCGACTCGCGCCAACGCCGGGCGAAACCGCTGCCGTGG
GCAGTCACGTAGGCCTTGCCGCCGCTGGCTTGCAGCTCCCCTTGGACGGG
GCTGGGGGCAATTTCTTCGAGAGCAATGCGCAAGGCGGAACAACGGTACC
GGCTCGGTCCCGA
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