EY692465

Overview
NameEY692465
Unique NameEY692465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: POTA_SPICI (Spermidine/putrescine import ATP-binding protein potA OS=Spiroplasma citri GN=potA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12
Identity = 43/109 (39.45%), Postives = 62/109 (56.88%), Query Frame = -3
Query:   28 MSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEP-LNGP-HPR-VAVAFQDPSLLPWLSLEKNVAFGLDFARKAH 345
            M   +L  + I   Y G  VL+G +L ++ GE V++LGPSG GK   LR++AGF  P  G +  LG+  L  P H R V   FQ+ +L P L++  N+A+GL   R  +
Sbjct:    1 METNILELRNISKQYDGKVVLKGINLNIKEGEFVTLLGPSGCGKTTTLRIIAGFEQPNSGELLFLGKDYLKTPVHKREVNTVFQNYALFPHLTVFDNIAYGLKVKRNKY 109          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: POTA_LACSS (Spermidine/putrescine import ATP-binding protein potA OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=potA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.706e-12
Identity = 41/116 (35.34%), Postives = 65/116 (56.03%), Query Frame = -3
Query:    7 MSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLN---GPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEERR 345
            M Q ++  + +   Y  N +L+G D+ L+ G+  ++LGPSG GK  +LR++AGF     G +   G+ +N       +V   FQD +L P L++  NVAFGL+  RK   S  E++
Sbjct:    1 MQQPMVEFKNVIKKYDDNQILKGIDMALEKGKFYTLLGPSGCGKTTILRIIAGFTNASSGDVLFEGKRMNDLPANKRQVNTVFQDYALFPHLNVFDNVAFGLNL-RKVKKSDVEKK 115          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: POTA_VIBF1 (Spermidine/putrescine import ATP-binding protein potA OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=potA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12
Identity = 43/117 (36.75%), Postives = 61/117 (52.14%), Query Frame = -3
Query:   10 QSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLN---GPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEER 351
            QS  +AV+   GI   + G  V+  FDL +  GE ++ILGPSG GK  +LR++AGF     G+I L    +         V   FQ  +L P +++ +NVAFGL   + A    E R
Sbjct:    6 QSEKEAVIKLTGISKSFDGKEVISNFDLDVNHGEFLTILGPSGCGKTTVLRMIAGFETADAGTILLDSTDVTSVPAEQRHVNTVFQSYALFPHMTVFENVAFGLRMQKVAESEIEPR 122          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: PHNT_SALTY (Putative 2-aminoethylphosphonate import ATP-binding protein phnT OS=Salmonella typhimurium GN=phnT PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12
Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = -3
Query:   49 PSGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGE---PLNGPHPR-VAVAFQDPSLLPWLSLEKNVAFGL 360
            P+ Q  S  VL +  + + Y GN VL+   L ++PGEV++++GPSG GK  +LR +AGF  P GG I L+G+       P+ R +A+  Q+ +L P L +E NVAFGL
Sbjct:   11 PASQGTSGIVLDS--LRVAYHGNVVLKPLSLTIEPGEVLALIGPSGSGKTTVLRAVAGFVQPAGGRI-LIGDTDVTHLPPYKRGLAMVVQNYALFPHLKVEDNVAFGL 115          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: PHNT_SALTI (Putative 2-aminoethylphosphonate import ATP-binding protein phnT OS=Salmonella typhi GN=phnT PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12
Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = -3
Query:   49 PSGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGE---PLNGPHPR-VAVAFQDPSLLPWLSLEKNVAFGL 360
            P+ Q  S  VL +  + + Y GN VL+   L ++PGEV++++GPSG GK  +LR +AGF  P GG I L+G+       P+ R +A+  Q+ +L P L +E NVAFGL
Sbjct:   11 PASQGTSGIVLDS--LRVAYHGNVVLKPLSLTIEPGEVLALIGPSGSGKTTVLRAVAGFVQPAGGRI-LIGDTDVTHLPPYKRGLAMVVQNYALFPHLKVEDNVAFGL 115          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: PHNT_SALPA (Putative 2-aminoethylphosphonate import ATP-binding protein phnT OS=Salmonella paratyphi A GN=phnT PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12
Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = -3
Query:   49 PSGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGE---PLNGPHPR-VAVAFQDPSLLPWLSLEKNVAFGL 360
            P+ Q  S  VL +  + + Y GN VL+   L ++PGEV++++GPSG GK  +LR +AGF  P GG I L+G+       P+ R +A+  Q+ +L P L +E NVAFGL
Sbjct:   11 PASQGTSGIVLDS--LRVAYHGNVVLKPLSLTIEPGEVLALIGPSGSGKTTVLRAVAGFVQPAGGRI-LIGDTDVTHLPPYKRGLAMVVQNYALFPHLKVEDNVAFGL 115          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: PHNT_SALCH (Putative 2-aminoethylphosphonate import ATP-binding protein phnT OS=Salmonella choleraesuis GN=phnT PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.228e-12
Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = -3
Query:   49 PSGQSMSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGE---PLNGPHPR-VAVAFQDPSLLPWLSLEKNVAFGL 360
            P+ Q  S  VL +  + + Y GN VL+   L ++PGEV++++GPSG GK  +LR +AGF  P GG I L+G+       P+ R +A+  Q+ +L P L +E NVAFGL
Sbjct:   11 PASQGTSGIVLDS--LRVAYHGNVVLKPLSLTIEPGEVLALIGPSGSGKTTVLRAVAGFVQPAGGRI-LIGDTDVTHLPPYKRGLAMVVQNYALFPHLKVEDNVAFGL 115          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_SILPO (Taurine import ATP-binding protein tauB OS=Silicibacter pomeroyi GN=tauB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = -3
Query:   52 GNSV--LEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFG 297
            G+SV  L+   L L+ GE++S+LGPSG GK  LL ++AGF AP  G I + G  ++GP+    + FQ  +L  W+++  NV+FG
Sbjct:   18 GSSVQALKNVSLHLKEGELMSVLGPSGCGKTTLLNIVAGFLAPTEGHIAMNGHKVHGPNAERGMVFQQGALFEWMNVRDNVSFG 101          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: TAUB_PARPN (Taurine import ATP-binding protein tauB OS=Paracoccus pantotrophus GN=tauB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12
Identity = 37/81 (45.68%), Postives = 50/81 (61.73%), Query Frame = -3
Query:   49 SVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 291
            + L+G +L+++ G+ V  LG SG GK  LL ++AGF AP  G I L   P+ GP     V FQ  +LLPWL++  NV FGL
Sbjct:   23 TALKGVNLEVKSGDFVVALGASGCGKTTLLNLMAGFMAPSAGQITLGDRPVAGPGAERGVVFQKHALLPWLNVIDNVEFGL 103          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: POTA_MARAV (Spermidine/putrescine import ATP-binding protein potA OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=potA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.910e-12
Identity = 41/115 (35.65%), Postives = 61/115 (53.04%), Query Frame = -3
Query:   10 MSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPR---VAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEER 345
            M Q +L    +   + G  VL+  DL +  GE +++LGPSG GK  LLR++AGF  P  G+I L  + L    P    +   FQ+ +L P +S+  NVA+GL   ++      ER
Sbjct:    1 MKQTLLSLSNLTKQFDGKKVLDSLDLDIFDGEFITLLGPSGCGKTTLLRMMAGFEHPDDGTIALGDQDLTHTPPEHRPLNTVFQNYALFPHMSVFDNVAYGLKMEKRPKQEIRER 115          
The following BLAST results are available for this feature:
BLAST of EY692465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
POTA_SPICI1.706e-1239.45Spermidine/putrescine import ATP-binding protein p... [more]
POTA_LACSS1.706e-1235.34Spermidine/putrescine import ATP-binding protein p... [more]
POTA_VIBF12.228e-1236.75Spermidine/putrescine import ATP-binding protein p... [more]
PHNT_SALTY2.228e-1242.59Putative 2-aminoethylphosphonate import ATP-bindin... [more]
PHNT_SALTI2.228e-1242.59Putative 2-aminoethylphosphonate import ATP-bindin... [more]
PHNT_SALPA2.228e-1242.59Putative 2-aminoethylphosphonate import ATP-bindin... [more]
PHNT_SALCH2.228e-1242.59Putative 2-aminoethylphosphonate import ATP-bindin... [more]
TAUB_SILPO2.910e-1242.86Taurine import ATP-binding protein tauB OS=Silicib... [more]
TAUB_PARPN2.910e-1245.68Taurine import ATP-binding protein tauB OS=Paracoc... [more]
POTA_MARAV2.910e-1235.65Spermidine/putrescine import ATP-binding protein p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692465 ID=EY692465; Name=EY692465; organism=Citrus sinensis; type=EST; length=563bp
CCGGTTGCGTCGTTCTTCAGGACTGAGGTGCGCTTTTCGGGCAAAGTCCA
GGCCAAAGGCGACGTTCTTTTCCAGGCTCAACCACGGCAACAGGCTGGGG
TCCTGGAACGCCACCGCCACCCGCGGATGCGGGCCATTCAACGGCTCGCC
CAGCAGGTGAATGCTGCCGCCCTGGGGCGCCGGAAAACCGGCAAGCACCC
GCAGCAGGTGGAACTTGCCAACGCCGCTGGGGCCGAGGATCGACACCACT
TCGCCGGGCTGCAATTGCAGGTCGAACCCTTCCAGCACCGAGTTGCCCCC
ATAGCCCAGGCAAATTCCCTGGGCATGCAGTACCGCCTGGCTCATAGATT
GGCCTGACGGTTCAACTCGGTGCGCAACTGCACCAGGCTCGGGGTCACGA
TCGGCACAAACGCCGACTCGCGCCAACGCCGGGCGAAACCGCTGCCGTGG
GCAGTCACGTAGGCCTTGCCGCCGCTGGCTTGCAGCTCCCCTTGGACGGG
GCTGGGGGCAATTTCTTCGAGAGCAATGCGCAAGGCGGAACAACGGTACC
GGCTCGGTCCCGA
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