EY692465

Overview
NameEY692465
Unique NameEY692465
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: POTA_PSEAB (Spermidine/putrescine import ATP-binding protein potA OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=potA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.483e-12
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = -3
Query:   40 MSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPR---VAVAFQDPSLLPWLSLEKNVAFGLDFA 345
            M+  +L  + +   +G  + ++   L +  GE  ++LGPSG GK  LLR+LAGF  P  G I L G+ L G  P    V   FQ  +L P +S+ +N+AF L  A
Sbjct:    1 MTPPLLEIRNVTRRFGDFTAVDNVSLTINTGEFFTLLGPSGCGKTTLLRMLAGFDQPDSGEIRLNGQDLAGVEPEKRPVHTVFQSYALFPHMSVAQNIAFPLKMA 105          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: POTA_NITMU (Spermidine/putrescine import ATP-binding protein potA OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=potA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.483e-12
Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = -3
Query:    1 AVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPR---VAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEERRNR 336
            A+L  + +   +GG + ++   + ++ GE  ++LGPSG GK  LLR++AGF  P  G I L G+ + G  P    V   FQ  +L P +++  N+AF L  A KA   P+E + R
Sbjct:    2 ALLEIRNVTRRFGGYTAVDNVSIDVEAGEFFTLLGPSGCGKTTLLRMIAGFDLPDSGQILLDGKDMVGIPPEKRPVHTVFQTYALFPHMTVADNIAFPLKMAGKA---PQEIKKR 113          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: POTA_LACPL (Spermidine/putrescine import ATP-binding protein potA OS=Lactobacillus plantarum GN=potA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.483e-12
Identity = 38/113 (33.63%), Postives = 63/113 (55.75%), Query Frame = -3
Query:   13 SQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLN---GPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEE 342
            +Q ++    +   YG + VL+  +L L+ G+  ++LGPSG GK  +LR +AGF     G ++  G+ +N       +V   FQD +L P +++ +NVAFGL    K H  P++
Sbjct:    5 TQPIIRLTNVTKSYGEHQVLKNINLDLEAGKFYTLLGPSGCGKTTILRTIAGFTDATSGQVYFDGQVINTLPANQRQVNTVFQDYALFPHMNVAENVAFGL----KLHKVPKD 113          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: POTA2_PSEAE (Spermidine/putrescine import ATP-binding protein potA 2 OS=Pseudomonas aeruginosa GN=potA2 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.483e-12
Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = -3
Query:   40 MSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPR---VAVAFQDPSLLPWLSLEKNVAFGLDFA 345
            M+  +L  + +   +G  + ++   L +  GE  ++LGPSG GK  LLR+LAGF  P  G I L G+ L G  P    V   FQ  +L P +S+ +N+AF L  A
Sbjct:    1 MTPPLLEIRNVTRRFGDFTAVDNVSLTINTGEFFTLLGPSGCGKTTLLRMLAGFDQPDSGEIRLNGQDLAGVEPEKRPVHTVFQSYALFPHMSVAQNIAFPLKMA 105          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: FBPC_PHOPR (Fe(3+) ions import ATP-binding protein fbpC OS=Photobacterium profundum GN=fbpC PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 6.483e-12
Identity = 35/94 (37.23%), Postives = 56/94 (59.57%), Query Frame = -3
Query:   49 QGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPR---VAVAFQDPSLLPWLSLEKNVAFGL 321
            + +C  +G N+V+   DL+++ G +V++LGPSG GK  +LR++AG   P  G I + GE +     +   + + FQ  +L P LSL  NV +GL
Sbjct:   10 KNVCKRFGDNTVINNLDLEIKKGSLVTLLGPSGCGKTTVLRLVAGLEKPTSGQIFIDGEDVTNTSIQQRDICMVFQSYALFPHLSLYDNVGYGL 103          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: CYSA_METCA (Sulfate/thiosulfate import ATP-binding protein cysA OS=Methylococcus capsulatus GN=cysA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 6.483e-12
Identity = 42/113 (37.17%), Postives = 58/113 (51.33%), Query Frame = -3
Query:    1 LHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPH---PRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEERRNR 330
            +  + I   +G    L+G DL +  GE+V++LGPSG GK  LLR++AG  A   G I L GE     H    RV   FQ  +L   +S+ +N+AFGL    +    PE    R
Sbjct:    3 IEIRNITKSFGSFQALKGIDLTIGSGELVALLGPSGCGKTTLLRIIAGLEAADSGQILLHGEDTTHRHVRERRVGFVFQHYALFRHMSVFENIAFGLRVRPRGQRPPEAEIRR 115          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: SSUB_RHOP5 (Aliphatic sulfonates import ATP-binding protein ssuB OS=Rhodopseudomonas palustris (strain BisA53) GN=ssuB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.466e-12
Identity = 39/85 (45.88%), Postives = 50/85 (58.82%), Query Frame = -3
Query:   49 YGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 303
            +G NSVL G DL +  G+ V+I+G SG GK  LLR++AG   P  G+I    + L G    V V FQ+P LLPW  +  NV  GL
Sbjct:   49 FGDNSVLRGIDLHIPAGQFVTIVGRSGCGKSTLLRLIAGLDQPTAGNIGFGDDRLPGD---VRVMFQEPRLLPWARVLANVEVGL 130          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: POTA_MESFL (Spermidine/putrescine import ATP-binding protein potA OS=Mesoplasma florum GN=potA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.466e-12
Identity = 38/102 (37.25%), Postives = 56/102 (54.90%), Query Frame = -3
Query:   49 MSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGE---PLNGPHPRVAVAFQDPSLLPWLSLEKNVAFGL 345
            M   +L  + +   Y G  VL+G DL ++ GE +++LGPSG GK   LR++AGF  P  G I   G+   P+     +    FQ  +L P L++  N+AFGL
Sbjct:    1 MENNILELRNVTKDYDGKVVLKGIDLNIKEGEFITLLGPSGCGKTTTLRIVAGFEKPNSGQIMFEGKDLLPIPINKRQFNTIFQSYALFPHLNVFDNIAFGL 102          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: POTA_LACBA (Spermidine/putrescine import ATP-binding protein potA OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=potA PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.466e-12
Identity = 39/118 (33.05%), Postives = 62/118 (52.54%), Query Frame = -3
Query:    1 MSQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPLN---GPHPRVAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEERRNR 345
            M+Q ++    +   Y  N++L   +L L+ G+  ++LGPSG GK  +LR +AGF     G I   G+ +N        V   FQD +L P +++ +NVAFGL   ++      ER N+
Sbjct:    1 MTQPIIELHQVTKRYADNTILSNINLTLESGKFYTLLGPSGCGKTTILRTIAGFTDATTGDILFAGKRINDVPANKRNVNTVFQDYALFPHMTVAENVAFGLTLQKRPKSEIAERVNQ 118          
BLAST of EY692465 vs. ExPASy Swiss-Prot
Match: POTA_BACFR (Spermidine/putrescine import ATP-binding protein potA OS=Bacteroides fragilis GN=potA PE=3 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 8.466e-12
Identity = 40/114 (35.09%), Postives = 64/114 (56.14%), Query Frame = -3
Query:   10 SQAVLHAQGICLGYGGNSVLEGFDLQLQPGEVVSILGPSGVGKFHLLRVLAGFPAPQGGSIHLLGEPL--NGPHPR-VAVAFQDPSLLPWLSLEKNVAFGLDFARKAHLSPEER 342
            S++++   G+   +G  + L+   L ++ GE V+ILGPSG GK  LLR++AGF     G I + G+ +    PH R V   FQ  +L P L++  N+AFGL   +    + E++
Sbjct:    6 SKSIIEVNGVSKFFGEKTALDHVTLNVKKGEFVTILGPSGCGKTTLLRLIAGFQTASEGEIKISGKEITQTPPHKRPVNTVFQKYALFPHLNVYDNIAFGLKLKKMPKQTIEKK 119          
The following BLAST results are available for this feature:
BLAST of EY692465 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 171
Match NameE-valueIdentityDescription
POTA_PSEAB6.483e-1237.14Spermidine/putrescine import ATP-binding protein p... [more]
POTA_NITMU6.483e-1235.65Spermidine/putrescine import ATP-binding protein p... [more]
POTA_LACPL6.483e-1233.63Spermidine/putrescine import ATP-binding protein p... [more]
POTA2_PSEAE6.483e-1237.14Spermidine/putrescine import ATP-binding protein p... [more]
FBPC_PHOPR6.483e-1237.23Fe(3+) ions import ATP-binding protein fbpC OS=Pho... [more]
CYSA_METCA6.483e-1237.17Sulfate/thiosulfate import ATP-binding protein cys... [more]
SSUB_RHOP58.466e-1245.88Aliphatic sulfonates import ATP-binding protein ss... [more]
POTA_MESFL8.466e-1237.25Spermidine/putrescine import ATP-binding protein p... [more]
POTA_LACBA8.466e-1233.05Spermidine/putrescine import ATP-binding protein p... [more]
POTA_BACFR8.466e-1235.09Spermidine/putrescine import ATP-binding protein p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-H10-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692465 ID=EY692465; Name=EY692465; organism=Citrus sinensis; type=EST; length=563bp
CCGGTTGCGTCGTTCTTCAGGACTGAGGTGCGCTTTTCGGGCAAAGTCCA
GGCCAAAGGCGACGTTCTTTTCCAGGCTCAACCACGGCAACAGGCTGGGG
TCCTGGAACGCCACCGCCACCCGCGGATGCGGGCCATTCAACGGCTCGCC
CAGCAGGTGAATGCTGCCGCCCTGGGGCGCCGGAAAACCGGCAAGCACCC
GCAGCAGGTGGAACTTGCCAACGCCGCTGGGGCCGAGGATCGACACCACT
TCGCCGGGCTGCAATTGCAGGTCGAACCCTTCCAGCACCGAGTTGCCCCC
ATAGCCCAGGCAAATTCCCTGGGCATGCAGTACCGCCTGGCTCATAGATT
GGCCTGACGGTTCAACTCGGTGCGCAACTGCACCAGGCTCGGGGTCACGA
TCGGCACAAACGCCGACTCGCGCCAACGCCGGGCGAAACCGCTGCCGTGG
GCAGTCACGTAGGCCTTGCCGCCGCTGGCTTGCAGCTCCCCTTGGACGGG
GCTGGGGGCAATTTCTTCGAGAGCAATGCGCAAGGCGGAACAACGGTACC
GGCTCGGTCCCGA
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