CX671432

Overview
NameCX671432
Unique NameCX671432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_ACIAD (L-lactate dehydrogenase [cytochrome] OS=Acinetobacter sp. (strain ADP1) GN=lldD PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.058e-27
Identity = 69/222 (31.08%), Postives = 116/222 (52.25%), Query Frame = -2
Query:  255 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEAND-----------SGLAAYVA---GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 857
            TVD P  G R  D  +  + P     +  Q +       D+G +   +D           +GL  Y++      D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD V ++  A+  + +A +G + +  D G+R G DV + LALGA  + +GR  +Y+LAA+G +GV  +L+++ +E  +AM L+G +++ +I    +V
Sbjct:  155 TVDMPVPGARYRDAHSGMSGPNAAMRRYLQSMMHPQWAWDVGLLGRPHDLGNISKYLGKTTGLEDYISWLGSNFDPSISWKDLEWIREFWDGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVMSSARAMPAIAEAVKGDLTILADSGIRNGLDVVRMLALGADSVMLGRAFIYALAAQGGQGVSNLLDLIDKEMRVAMTLTGAKTIADINESCLV 376          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.018e-26
Identity = 78/223 (34.98%), Postives = 115/223 (51.57%), Query Frame = -2
Query:  249 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQ--------GLD--------LGKMDEANDSGL---AAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVTE 860
            LT D    G RE D+ NRF +P   + K            LD        L     +  S L   AA ++ Q+D S +W+ ++WL+ +    +LVKG+L+AED             +SNHG RQLD   + +  L + V  T G+ PV +D G RRG+D+ KALALGA  + +GR  +Y LAA GE GV  VL +L+ + +  +A  GC  +  ++ D++  E
Sbjct:  155 LTTDVAVNGYRERDLHNRFKIPMSYSAKVVLDGCLHPRWSLDFVRHGMPQLANFVSSQTSSLEMQAALMSRQMDASFNWEALRWLRDLWPHKLLVKGLLSAEDADRCIAEGADGVILSNHGGRQLDCAISPMEVLAQSVAKT-GK-PVLIDSGFRRGSDIVKALALGAEAVLLGRATLYGLAARGETGVDEVLTLLKADIDRTLAQIGCPDITSLSPDYLQNE 375          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_PSEFS (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas fluorescens (strain SBW25) GN=lldD PE=3 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 2.018e-26
Identity = 72/222 (32.43%), Postives = 110/222 (49.55%), Query Frame = -2
Query:  255 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG--------------LAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 857
            TVD P  G R  D  +  + P     +  Q +       D+G M   +D G                 ++A   D S+SWKD++W++   K P+++KG+L  +D             VSNHG RQLD V +T  AL  +  A    + V +D G+R G DV + LALGA    +GR   Y+LAA+G+ GV  +L++  +E  +AM L+G  S+++I    +V
Sbjct:  155 TVDMPTPGARYRDAHSGMSGPFAAQRRMLQAMTKPQWAFDVGLMGRPHDLGNISKYLGKPTHLEDYIGWLANNFDPSISWKDLEWIREFWKGPMIIKGILDPQDAKDAVSFGADGIVVSNHGGRQLDGVLSTAKALPPIADAVGDDLTVLVDSGIRSGLDVVRMLALGAKACLLGRASAYALAADGQNGVENLLDIFAKEMRVAMTLTGVTSIEQIDHTTLV 376          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_HAEDU (L-lactate dehydrogenase [cytochrome] OS=Haemophilus ducreyi GN=lldD PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.635e-26
Identity = 66/177 (37.29%), Postives = 97/177 (54.80%), Query Frame = -2
Query:  255 TLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 785
            TL N  G   GK    +D   A ++A   D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD   ++  AL  +  A +G I +  D G+R G DV + +ALGA    IGR  VY+L+A G  GV  +L++ R+E  +AM L+    + +I RD +V
Sbjct:  203 TLGNVSGYT-GKSVGLDD--YAVWLADNFDPSISWKDLEWIRDFWDGPMVIKGILDVEDAKDAVRFGADGIVVSNHGGRQLDGALSSAKALPSIADAVKGEIKILADSGIRNGLDVVRMIALGADATLIGRAFVYALSAAGRAGVENMLDIFRKEMHVAMTLTSNARISDINRDALV 376          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_BART1 (L-lactate dehydrogenase [cytochrome] OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=lldD PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.442e-26
Identity = 64/174 (36.78%), Postives = 97/174 (55.75%), Query Frame = -2
Query:  255 DLGKMDEANDSGLA-----AYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 761
            DLG +    +  +A      ++    D S+ W D++W++   K  +++KG+L  ED             VSNHG RQLD V +T  AL  + +A +  + +  D GVR G DV + +A GA  + IGR  VY+LAA GEKGV  +L++   E  +AM L+G ++LKEIT + +V
Sbjct:  203 DLGNVSTYLEKKIALDDYVGWLGANFDPSIGWHDLQWIRDFWKGKMILKGILDPEDAREAVQFGADGIVVSNHGGRQLDGVLSTARALPAIAEAVKNDLVILADSGVRSGLDVVRMIAQGADAVMIGRAFVYALAAAGEKGVAHLLDLFANEMRVAMTLTGAQTLKEITCESLV 376          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_BARQU (L-lactate dehydrogenase [cytochrome] OS=Bartonella quintana GN=lldD PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.668e-26
Identity = 57/155 (36.77%), Postives = 89/155 (57.42%), Query Frame = -2
Query:  252 YVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIVT 716
            ++    D S+ W D++W++   K  +++KG+L  +D             VSNHG RQLD V +T  AL  + +   G + +  D GVR G DV + +A GA  + IGR  +Y+LAA GEKGV  +L++   E  +AM L+G R++KEIT + + +
Sbjct:  223 WLGANFDPSIGWSDLQWIRDFWKGKMILKGILDPQDAREAVQFGADGIVVSNHGGRQLDGVLSTARALPAIAEVVTGDLTILADSGVRSGLDVVRMIAQGADAVMIGRAFIYALAAAGEKGVMHLLDLFANEMRVAMTLTGVRAVKEITHESLAS 377          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIN (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae GN=lldD PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.001e-25
Identity = 72/222 (32.43%), Postives = 115/222 (51.80%), Query Frame = -2
Query:  255 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAYVAGQI-------------DRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 857
            TVD P  G R  D+ +  + P     +  QG        D+G   + +  G ++ Y+  QI             D S+SWKD++W++   + P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G I +  D G+R G D+ + LALGA    +GR  VY+L AEG +GV  +L++ ++E  +AM L+  R++ +I  + +V
Sbjct:  155 TVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTLGNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVLSSARALPPIADAVKGDIKIIADSGIRNGLDIVRMLALGADATMLGRAFVYALGAEGRQGVENMLDIFKKEMHVAMTLTSNRTIADIKPEALV 376          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LA2M_MYCSM (Lactate 2-monooxygenase OS=Mycobacterium smegmatis PE=1 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 1.708e-25
Identity = 61/148 (41.22%), Postives = 86/148 (58.11%), Query Frame = -2
Query:  264 GQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRD 707
            G    S++W+D+ W+++ITK+P+++KG+   +D              SNHG RQ +     +  L EVVKA+ G  PV  D G+R G DV KALA+GAS + IGRP  +  A  G KG+  V   L  E +L MA+ G R+LKE+T D
Sbjct:  242 GLFGHSVTWEDIDWVRSITKMPVILKGIQHPDDARRAVDSGVDGIYCSNHGGRQANGGLPALDCLPEVVKAS-GDTPVLFDSGIRTGADVVKALAMGASAVGIGRPYAWGAALGGSKGIEHVARSLLAEADLIMAVDGYRNLKELTID 388          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_ACTPJ (L-lactate dehydrogenase [cytochrome] OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=lldD PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.914e-25
Identity = 56/154 (36.36%), Postives = 89/154 (57.79%), Query Frame = -2
Query:  255 YVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 716
            ++    D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD   ++  AL  +  A +G I +  D G+R G D+ + LALGA    +GR  VY+L A G+ GV  +L++ ++E  +AM L+  + + +ITRD +V
Sbjct:  223 WLGENFDPSISWKDLEWIRDFWDGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGALSSARALPSIADAVKGDIKILADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGKAGVENMLDIFKKEMHVAMTLTSNQKISDITRDALV 376          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_ACTP7 (L-lactate dehydrogenase [cytochrome] OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=lldD PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.914e-25
Identity = 56/154 (36.36%), Postives = 89/154 (57.79%), Query Frame = -2
Query:  255 YVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 716
            ++    D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD   ++  AL  +  A +G I +  D G+R G D+ + LALGA    +GR  VY+L A G+ GV  +L++ ++E  +AM L+  + + +ITRD +V
Sbjct:  223 WLGENFDPSISWKDLEWIRDFWDGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGALSSARALPSIADAVKGDIKILADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGKAGVENMLDIFKKEMHVAMTLTSNQKISDITRDALV 376          
The following BLAST results are available for this feature:
BLAST of CX671432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_ACIAD9.058e-2731.08L-lactate dehydrogenase [cytochrome] OS=Acinetobac... [more]
MDLB_PSEPU2.018e-2634.98(S)-mandelate dehydrogenase OS=Pseudomonas putida ... [more]
LLDD_PSEFS2.018e-2632.43L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_HAEDU2.635e-2637.29L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_BART13.442e-2636.78L-lactate dehydrogenase [cytochrome] OS=Bartonella... [more]
LLDD_BARQU7.668e-2636.77L-lactate dehydrogenase [cytochrome] OS=Bartonella... [more]
LLDD_HAEIN1.001e-2532.43L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LA2M_MYCSM1.708e-2541.22Lactate 2-monooxygenase OS=Mycobacterium smegmatis... [more]
LLDD_ACTPJ2.914e-2536.36L-lactate dehydrogenase [cytochrome] OS=Actinobaci... [more]
LLDD_ACTP72.914e-2536.36L-lactate dehydrogenase [cytochrome] OS=Actinobaci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A07-B13-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671432 ID=CX671432; Name=CX671432; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTATCAATCAACATCCGAGCAAAAACTATATAGATAAAGTTTTA
AAGAAAGAATATACAGGAAAGGGCAGAAGTAGCCATAATCATCATAACAG
AAGCTTAAAATAATTCAGACTCAATTAAACATGAACAAGTTCTCCAAGAA
AAAGAAGTAATAGAAAGTAACCAAATTATTGCTCTTTCTTCTATTTTGCA
TGCACGTATCTATAACCTGGGAACCGGACGAGGGAGAGAAGCATCCCATT
CAGTGACGATGTGATCACGAGTAATCTCTTTGAGTGAGCGGCAACCACTT
AGTGCCATTGCTAGCTCAAATTCTTCACGCAGCATCTCGAGTACTCTTCT
AACGCCTTTCTCTCCCTCAGCTGCCAATGAGTACACCACTGGTCGTCCAA
TAAATATACCAGAGGCTCCAAGTGCCAAGGCTTTGAAGACATCAGTTCCT
CGCCTAACACCACCATCCAAGAACACAGGAATACGCCCCTGAGTAGCTTT
CACAACCTCTTCCAGGGCCATGATAGTGGCAGGGACATAGTCAAGTTGAC
GAGCTCCATGATTGGATACAATAATCCCAGCTGCTCCAGCTTGAACTGCA
ATCCGCGCATCCTCTGCTGTGAGTACACCCTTCACCAGAATTGGCAATTT
GGTGATTGTTTGAAGCCACTTCACGTCCTTCCAGCTCAGAGAACGATCAA
TTTGACCAGCAACATAGGCAGCAAGCCCAGAGTCATTTGCCTCGTCCATC
TTGCCAAGGTCCAAACCCTGAAAATTCTTTAATGTCAAAAATGGTGGTAG
AGTGAATCTGTTTTTGATGTCAGCTTCTCTGCGACCCAGCCTCGGGGTAT
CAACTGTTAGAGCA
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