CX671432

Overview
NameCX671432
Unique NameCX671432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7606 contig Csv1_Contig7606:701..1564. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_ACTP2 (L-lactate dehydrogenase [cytochrome] OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=lldD PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.914e-25
Identity = 56/154 (36.36%), Postives = 89/154 (57.79%), Query Frame = -2
Query:  255 YVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 716
            ++    D S+SWKD++W++     P+++KG+L  ED             VSNHG RQLD   ++  AL  +  A +G I +  D G+R G D+ + LALGA    +GR  VY+L A G+ GV  +L++ ++E  +AM L+  + + +ITRD +V
Sbjct:  223 WLGENFDPSISWKDLEWIRDFWDGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGALSSARALPSIADAVKGDIKILADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGKAGVENMLDIFKKEMHVAMTLTSNQKISDITRDALV 376          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIG (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittGG) GN=lldD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.970e-25
Identity = 71/222 (31.98%), Postives = 114/222 (51.35%), Query Frame = -2
Query:  255 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAYVAGQI-------------DRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 857
            TVD P  G R  D+ +  + P     +  QG        D+G   + +  G ++ Y+  QI             D S+SWKD++W++   + P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G I +  D G+R G D+ + LALGA    +GR  VY+L A G +GV  +L++ ++E  +AM L+  R++ +I  + +V
Sbjct:  155 TVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTLGNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVLSSARALPPIADAVKGDIKIIADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGRQGVENMLDIFKKEMHVAMTLTSNRTIADIKPEALV 376          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_HAEIE (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain PittEE) GN=lldD PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.970e-25
Identity = 71/222 (31.98%), Postives = 114/222 (51.35%), Query Frame = -2
Query:  255 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAYVAGQI-------------DRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 857
            TVD P  G R  D+ +  + P     +  QG        D+G   + +  G ++ Y+  QI             D S+SWKD++W++   + P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G I +  D G+R G D+ + LALGA    +GR  VY+L A G +GV  +L++ ++E  +AM L+  R++ +I  + +V
Sbjct:  155 TVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTLGNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVLSSARALPPIADAVKGDIKIIADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGRQGVENMLDIFKKEMRVAMTLTSNRTIADIKPEALV 376          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD_HAEI8 (L-lactate dehydrogenase [cytochrome] OS=Haemophilus influenzae (strain 86-028NP) GN=lldD PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.491e-25
Identity = 71/222 (31.98%), Postives = 114/222 (51.35%), Query Frame = -2
Query:  255 TVDTPRLGRREADIKNRFTLPPFLTLKNFQGL-------DLGKMDEANDSG-LAAYVAGQI-------------DRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHIV 857
            TVD P  G R  D+ +  + P     +  QG        D+G   + +  G ++ Y+  QI             D S+SWKD++W++   + P+++KG+L  ED             VSNHG RQLD V ++  AL  +  A +G I +  D G+R G D+ + LALGA    +GR  VY+L A G +GV  +L++ ++E  +AM L+  R++ +I  + +V
Sbjct:  155 TVDMPTPGARYRDMHSGMSGPYKEIRRVLQGFTHPFWAYDVGIKGKPHTLGNVSTYMGRQIGLDDYIGWLTENFDPSISWKDLEWIREFWEGPMVIKGILDPEDAKDAVRFGADGIVVSNHGGRQLDGVLSSARALPPIADAVKGDIKIIADSGIRNGLDIVRMLALGADATMLGRAFVYALGAAGRQGVENMLDIFKKEMRVAMTLTSNRTIVDIKPEALV 376          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD1_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 1 OS=Mycobacterium tuberculosis GN=lldD1 PE=3 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.652e-23
Identity = 64/176 (36.36%), Postives = 93/176 (52.84%), Query Frame = -2
Query:  270 PPFLTLKNFQGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEIT 797
            PP L + N      G+  E      AAY         +W+D+ WL+ +   P ++KGV+  +D             VSNHG   LD  PA+I AL  V  A   ++ V LDGG+RRG+DV KA+ALGA  + IGR  ++ LAA G+ GV  VL++LR   + A+   G  S+ +++
Sbjct:  204 PPDLRVPN-----QGRRGEPGPPFFAAYGEWMATPPPTWEDIGWLRELWGGPFMLKGVMRVDDAKRAVDAGVSAISVSNHGGNNLDGTPASIRALPAVSAAVGDQVEVLLDGGIRRGSDVVKAVALGARAVMIGRAYLWGLAANGQAGVENVLDILRGGIDSALMGLGHASVHDLS 374          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: YKN3_SCHPO (Uncharacterized lactate 2-monooxygenase PB1A11.03 OS=Schizosaccharomyces pombe GN=SPAPB1A11.03 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.036e-22
Identity = 79/223 (35.43%), Postives = 112/223 (50.22%), Query Frame = -2
Query:  249 LTVDTPRLGRREADIKNRFTLPPFLTLKNFQGLDLGKMD---------------EANDSGLAAYVAGQIDRSLS--WKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSL--KEITRDHIVTE 860
            +T+DT  LG R +D+ N +   PFL   +  G++ G  D               E N    A   AG +   +S  W+D+K+L+     PI++KG++   D             VSNHG RQ D   A++  L ++V A   ++ V  D GVR G D+ KALALGA  + IGRP VY LA EG  GV  V+  L  + EL + LSG  S+  K++ RD +  E
Sbjct:  187 VTLDTFILGWRPSDMDNGYD--PFLNPDSI-GVEHGFSDPVFRKQFKEKHGVEVEENMLEAAKEFAGIVFPGISHDWEDLKFLRKHWDGPIVLKGIMNVPDAKKAVEYGMQGIVVSNHGGRQQDGGVASLTMLPKIVDAVGDKLDVLFDSGVRSGADIAKALALGAKMVLIGRPYVYGLALEGSSGVSHVIRCLLGDLELTLHLSGIVSVKPKDLNRDVLYKE 406          
BLAST of CX671432 vs. ExPASy Swiss-Prot
Match: LLDD2_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 2 OS=Mycobacterium tuberculosis GN=lldD2 PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.334e-21
Identity = 65/217 (29.95%), Postives = 101/217 (46.54%), Query Frame = -2
Query:  258 LTVDTPRLGRREADIKNRFTLPPFLTLKNF----------------QGLDLGKMDEANDSGLAAYVAGQIDRSLSWKDVKWLQTITKLPILVKGVLTAEDXXXXXXXXXXXXXVSNHGARQLDYVPATIMALEEVVKATQGRIPVFLDGGVRRGTDVFKALALGASGIFIGRPVVYSLAAEGEKGVRRVLEMLREEFELAMALSGCRSLKEITRDHI 860
            +TVD P  G R  D++N  ++PP LTL+                  + L    +D    + +  Y+    D SL++ D+ W+++     ++VKG+ T +D             +SNHG RQLD  P     L  V +       + +D G+  G D+  A+ALGA    IGR  +Y L A GE GV R +E+L+      M L G   L+E++  H+
Sbjct:  186 VTVDVPVAGARLRDVRNGMSIPPALTLRTVLDAMGHPRWWFDLLTTEPLAFASLDRWPGT-VGEYLNTVFDPSLTFDDLAWIKSQWPGKLVVKGIQTLDDARAVVDRGVDGIVLSNHGGRQLDRAPVPFHLLPHVARELGKHTEILVDTGIMSGADIVAAIALGARCTLIGRAYLYGLMAGGEAGVNRAIEILQTGVIRTMRLLGVTCLEELSPRHV 401          
The following BLAST results are available for this feature:
BLAST of CX671432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD_ACTP22.914e-2536.36L-lactate dehydrogenase [cytochrome] OS=Actinobaci... [more]
LLDD_HAEIG4.970e-2531.98L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEIE4.970e-2531.98L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD_HAEI86.491e-2531.98L-lactate dehydrogenase [cytochrome] OS=Haemophilu... [more]
LLDD1_MYCTU4.652e-2336.36Putative L-lactate dehydrogenase [cytochrome] 1 OS... [more]
YKN3_SCHPO1.036e-2235.43Uncharacterized lactate 2-monooxygenase PB1A11.03 ... [more]
LLDD2_MYCTU3.334e-2129.95Putative L-lactate dehydrogenase [cytochrome] 2 OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A07_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A07-B13-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671432 ID=CX671432; Name=CX671432; organism=Citrus sinensis; type=EST; length=864bp
TTTTTTTTATCAATCAACATCCGAGCAAAAACTATATAGATAAAGTTTTA
AAGAAAGAATATACAGGAAAGGGCAGAAGTAGCCATAATCATCATAACAG
AAGCTTAAAATAATTCAGACTCAATTAAACATGAACAAGTTCTCCAAGAA
AAAGAAGTAATAGAAAGTAACCAAATTATTGCTCTTTCTTCTATTTTGCA
TGCACGTATCTATAACCTGGGAACCGGACGAGGGAGAGAAGCATCCCATT
CAGTGACGATGTGATCACGAGTAATCTCTTTGAGTGAGCGGCAACCACTT
AGTGCCATTGCTAGCTCAAATTCTTCACGCAGCATCTCGAGTACTCTTCT
AACGCCTTTCTCTCCCTCAGCTGCCAATGAGTACACCACTGGTCGTCCAA
TAAATATACCAGAGGCTCCAAGTGCCAAGGCTTTGAAGACATCAGTTCCT
CGCCTAACACCACCATCCAAGAACACAGGAATACGCCCCTGAGTAGCTTT
CACAACCTCTTCCAGGGCCATGATAGTGGCAGGGACATAGTCAAGTTGAC
GAGCTCCATGATTGGATACAATAATCCCAGCTGCTCCAGCTTGAACTGCA
ATCCGCGCATCCTCTGCTGTGAGTACACCCTTCACCAGAATTGGCAATTT
GGTGATTGTTTGAAGCCACTTCACGTCCTTCCAGCTCAGAGAACGATCAA
TTTGACCAGCAACATAGGCAGCAAGCCCAGAGTCATTTGCCTCGTCCATC
TTGCCAAGGTCCAAACCCTGAAAATTCTTTAATGTCAAAAATGGTGGTAG
AGTGAATCTGTTTTTGATGTCAGCTTCTCTGCGACCCAGCCTCGGGGTAT
CAACTGTTAGAGCA
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