CX671429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF5_HUMAN (ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 PE=1 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.056e-20 Identity = 50/162 (30.86%), Postives = 85/162 (52.47%), Query Frame = 3 Query: 120 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 +F K++M + ++GL AGKT+++ + G IPT+GFN+ V N+ +WD+GGQ + R +W Y + +++VVD+ D + + S EL +L + L LLV NK D P A+ +L +++GL+ + R T + +DW Sbjct: 12 IFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDW 172
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF4_BOVIN (ADP-ribosylation factor 4 OS=Bos taurus GN=ARF4 PE=2 SV=3) HSP 1 Score: 100.523 bits (249), Expect = 1.056e-20 Identity = 49/162 (30.25%), Postives = 87/162 (53.70%), Query Frame = 3 Query: 120 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 LF K++M + ++GL AGKT+++ + G IPT+GFN+ V N+ +WD+GGQ + R +W Y + +++VVD+ D + + EL +L + L LL+ NK D P A++ ++ +++GL+S+ +R T + +DW Sbjct: 12 LFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDW 172
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1_CHAGB (Small COPII coat GTPase SAR1 OS=Chaetomium globosum GN=SAR1 PE=3 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.380e-20 Identity = 54/152 (35.53%), Postives = 93/152 (61.18%), Query Frame = 3 Query: 102 LNW----LRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542 +NW L SL + +L +GL NAGKT+L++++ + + PT+ +++ GNV +DLGG + R +W+ Y V+ +V++VDA D++ P +++EL LLS L+ +P +VLGNKID P+A+S+++L Q+G+ T + Sbjct: 4 INWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAI-LQPTLHPTSEELSIGNVRFTTFDLGGHQQARRLWKDYFPEVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVVLGNKIDHPDAVSEDELRHQLGMYQTTGK 154
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL11_RAT (ADP-ribosylation factor-like protein 11 OS=Rattus norvegicus GN=Arl11 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.380e-20 Identity = 51/148 (34.46%), Postives = 89/148 (60.14%), Query Frame = 3 Query: 141 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKV-TKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNST 581 ++ ++GL AGKT+++ + G D +PTVGFN+ + G+V++ LWD+GGQ + R+ W+ Y + +VYV+D+ D LP + +EL ++L P++ G+P LVL NK + P+AL ++ ++ L+ D C + +C T Sbjct: 12 QVVMLGLDCAGKTTILYKLK-GNRLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELEEVLEDPNMAGVPFLVLANKQEAPDALPLLEIRNRLDLERFQDH--CWELRACSALT 156
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: AR13B_MOUSE (ADP-ribosylation factor-like protein 13B OS=Mus musculus GN=Arl13b PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.380e-20 Identity = 49/147 (33.33%), Postives = 88/147 (59.86%), Query Frame = 3 Query: 132 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVC-CYMISC 569 +++ L ++GL NAGKT+ I G + ED+ PTVGF+ + +G + ++DLGG R R +W+ Y +++VVD++D + + ++ + ++L P ++G P+LVL NK DK AL + D++E + L+ + + C C + C Sbjct: 20 RKVTLVMVGLDNAGKTATAKGIQ-GEHPEDVAPTVGFSKIDLRQGKFQVTIFDLGGGKRIRGIWKNYYAESYGVIFVVDSSDEERMEETKETMSEVLRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPC 165
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR2_SOLLC (GTP-binding protein SAR2 OS=Solanum lycopersicum GN=SAR2 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.354e-20 Identity = 57/153 (37.25%), Postives = 89/153 (58.17%), Query Frame = 3 Query: 81 MGLWEAFLNWLRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSIT 536 M L + F L SL ++++ ++ +GL NAGKT+L++++ + PT +++ GN+ K +DLGG R +W Y V A+VY+VDA D + P ++ EL LLS SL +P L+LGNKID P A S+++L +GL +T Sbjct: 1 MFLVDWFYGVLASLGLWQKDAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQYPTSEELSIGNIKFKAFDLGGHQIARRVWRDYYAKVDAVVYLVDANDRERFPEAKKELDGLLSDESLTNVPFLILGNKIDIPYAASEDELRYHLGLTGVT 152
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1_NEOFI (Small COPII coat GTPase sar1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sar1 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.354e-20 Identity = 56/152 (36.84%), Postives = 89/152 (58.55%), Query Frame = 3 Query: 102 LNW----LRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542 +NW L SL + +L +GL NAGKT+L++++ + + PT ++ GN +DLGG + R +W+ Y VS IV++VDA D++ P S++EL LL+ L +P L+LGNKID P+A+S+++L Q+GL T + Sbjct: 4 INWFYDVLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAT-LQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGK 154
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.354e-20 Identity = 52/148 (35.14%), Postives = 90/148 (60.81%), Query Frame = 3 Query: 87 LWEAFLNWLRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLK 527 LW+ F L L ++ +L +GL NAGKT+L++++ ++ +PT+ +++ G ++ +DLGG + R +W+ Y AV A+V+++D AD + + SR EL LL + +P+L+LGNKIDKP ALS++ L Q+ ++ Sbjct: 4 LWDWFNGVLNMLGLANKKGKLVFLGLDNAGKTTLLHMLKDDRIAQH-VPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLKWQLNIQ 150
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1_ASPNC (Small COPII coat GTPase SAR1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=sar1 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.354e-20 Identity = 54/152 (35.53%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 102 LNWLRSLF-----FKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542 +NW L + +L +GL NAGKT+L++++ + + PT ++ GN +DLGG + R +W+ Y VS IV++VDA D++ P S++EL LL+ L +P L+LGNKID P+A+S+++L Q+GL T + Sbjct: 4 INWFYDLLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAI-LQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGK 154
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1_ASPFU (Small COPII coat GTPase sar1 OS=Aspergillus fumigatus GN=sar1 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.354e-20 Identity = 53/152 (34.87%), Postives = 87/152 (57.24%), Query Frame = 3 Query: 102 LNWLRSLF-----FKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542 +NW + + +L +GL NAGKT+L++++ + + PT ++ GN +DLGG + R +W+ Y VS IV++VDA D++ P S++EL LL+ L +P L+LGNKID P+A+S+++L Q+GL T + Sbjct: 4 INWFYDILASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAT-LQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGK 154 The following BLAST results are available for this feature:
BLAST of CX671429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671429 ID=CX671429; Name=CX671429; organism=Citrus sinensis; type=EST; length=774bpback to top |