CX671429

Overview
NameCX671429
Unique NameCX671429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF3_YEAST (ADP-ribosylation factor 3 OS=Saccharomyces cerevisiae GN=ARF3 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 5.797e-19
Identity = 45/148 (30.41%), Postives = 84/148 (56.76%), Query Frame = 3
Query:  111 LRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCC 554
            L  LF  +EM++ ++GL  AGKT+++  +          PTVGFN+  VT  NV   +WD+GGQ R R +W  Y  A +A+++V+D++  + +  ++ EL+ ++ +  +  + LLV  NK D  +A+  +++ + + L+     +  C
Sbjct:    9 LGKLFGSKEMKILMLGLDKAGKTTILYKLKLNKIKTST-PTVGFNVETVTYKNVKFNMWDVGGQQRLRPLWRHYFPATTALIFVIDSSARNRMEEAKEELYSIIGEKEMENVVLLVWANKQDLKDAMKPQEVSDFLELEKNLKNQPWC 155          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1B_ARATH (GTP-binding protein SAR1B OS=Arabidopsis thaliana GN=SAR1B PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.571e-19
Identity = 56/153 (36.60%), Postives = 89/153 (58.17%), Query Frame = 3
Query:   81 MGLWEAFLNWLRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSIT 536
            M L++ F   L SL  +++E ++  +GL NAGKT+L++++      +   PT      +++ G +  K +DLGG    R +W+ Y   V A+VY+VDA D +    S+ EL  LLS  +L  +P L+LGNKID P A S+++L   +GL + T
Sbjct:    1 MFLFDWFYGILASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKRELDALLSDEALATVPFLILGNKIDIPYAASEDELRYHLGLTNFT 152          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL2_MOUSE (ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.571e-19
Identity = 52/159 (32.70%), Postives = 82/159 (51.57%), Query Frame = 3
Query:  129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            ++E+ L ++GL NAGKT+++     G   + + PT+GFN++ +      + +WD+GGQ   RS W  Y  +   +++VVD+AD   +   + EL  LL +  L G  LL+  NK D P ALS   + E + L SI          S     ++   IDW
Sbjct:   14 ERELRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDW 171          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1A_BRACM (GTP-binding protein SAR1A OS=Brassica campestris GN=SAR1A PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.888e-19
Identity = 55/147 (37.41%), Postives = 85/147 (57.82%), Query Frame = 3
Query:   99 FLNWLRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSIT 536
            F   L SL  +++E ++  +GL NAGKT+L++++      +   PT      +++ G +  K +DLGG    R +W+ Y   V A+VY+VDA D +    S+ EL  LLS  SL  +P L+LGNKID P A S+++L   +GL + T
Sbjct:    7 FYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQ-PTQHPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLSNFT 152          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1A_DICDI (GTP-binding protein Sar1A OS=Dictyostelium discoideum GN=sarA PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.687e-18
Identity = 55/155 (35.48%), Postives = 84/155 (54.19%), Query Frame = 3
Query:   81 MGLWEAFLNWLRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542
            M L++ F N L  L  + +  ++  +GL NAGKT+L+ V+  G  S   +PT      ++  GN+  K +DLGG    R +W+ Y  +V AIVY++D++  D    S+ EL  LLS   L  +P L+LGNK+D     S+E     +GL   T +
Sbjct:    1 MFLFDWFWNVLSFLGLYNKNAKILFLGLDNAGKTTLLGVLKDGRLSS-YLPTFHPTSEELAMGNIRFKAFDLGGHESARRLWKDYYPSVDAIVYLIDSSAQDRFVESKKELDSLLSSDELANVPFLILGNKVDIGNT-SEEKFRASLGLTQTTGK 153          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF5_ARATH (Probable ADP-ribosylation factor At2g18390 OS=Arabidopsis thaliana GN=At2g18390 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.687e-18
Identity = 48/135 (35.56%), Postives = 81/135 (60.00%), Query Frame = 3
Query:  129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSI 533
            ++EM + ++GL N+GKT++V  I  G  +  + PT+GFN++ +     T+ +WD+GGQ   RS W  Y      +V+VVD++D   L   + EL +LL +  L G  LL+L NK D   AL+ +++ + + L+S+
Sbjct:   14 EKEMRILMVGLDNSGKTTIVLKI-NGEDTSVISPTLGFNIKTIIYQKYTLNIWDVGGQKTIRSYWRNYFEQTDGLVWVVDSSDLRRLDDCKMELDNLLKEERLAGSSLLILANKQDIQGALTPDEIGKVLNLESM 147          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1_USTMA (Small COPII coat GTPase SAR1 OS=Ustilago maydis GN=SAR1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.203e-18
Identity = 50/152 (32.89%), Postives = 86/152 (56.58%), Query Frame = 3
Query:  102 LNWLRSLFFK-----QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542
            +NW   +  +     +  ++  +GL NAGKT+L++++     +  + PT+     ++  G V    +DLGG  + R +W+ Y   V  IV++VD  D++    +R+EL  LLS   L+ +P L+LGNKID P A+S+E+L + +GL   T +
Sbjct:    4 INWFWDILAQLGLAHKNAKILFLGLDNAGKTTLLHMLKNDRLAT-LQPTLHPTSEELAIGQVKFTTYDLGGHQQARRLWKDYFPEVDGIVFLVDTQDHERFAEARAELDALLSIEELSSVPFLILGNKIDAPGAVSEEELRQAIGLYQTTGK 154          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1_CRYNE (Small COPII coat GTPase SAR1 OS=Cryptococcus neoformans GN=SAR1 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.203e-18
Identity = 56/152 (36.84%), Postives = 86/152 (56.58%), Query Frame = 3
Query:  102 LNW----LRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542
            +NW    L SL    +  +L  +GL NAGKT+L++++     +  + PT+     ++  GNV    +DLGG  + R +W  Y   V  IV++VD+AD +    S++EL  LLS  SL  +P L+LGNKID   A+S+E L  ++GL   T +
Sbjct:    4 INWFWDVLASLGLMNKSAKLLFLGLDNAGKTTLLHMLKNDRLAT-LQPTLHPTSEELAIGNVKFTTYDLGGHIQARRLWRDYFPEVDGIVFLVDSADAERFAESKAELDSLLSIESLAQVPFLILGNKIDAYGAVSEEQLRHELGLYQTTGK 154          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL_SCHPO (ADP-ribosylation factor-like protein alp41 OS=Schizosaccharomyces pombe GN=alp41 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.203e-18
Identity = 50/159 (31.45%), Postives = 83/159 (52.20%), Query Frame = 3
Query:  129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            ++E+ + L+GL NAGKT+++  +     +E + PT GF +R +    +   +WD+GGQ   R+ W+ Y  +  AI++VVD+ D   L   R+ L +LL +  L    +LVL NK D   ALS E++ + + +          + +S     NI   I W
Sbjct:   14 EREVRVLLLGLDNAGKTTILKCLLNEDVNE-VSPTFGFQIRTLEVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANKSDVSGALSSEEISKILNISKYKSSHWRIFSVSALTGLNIKDAISW 171          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL2_RAT (ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus GN=Arl2 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.203e-18
Identity = 51/159 (32.08%), Postives = 82/159 (51.57%), Query Frame = 3
Query:  129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            ++++ L ++GL NAGKT+++     G   + + PT+GFN++ +      + +WD+GGQ   RS W  Y  +   +++VVD+AD   +   + EL  LL +  L G  LL+  NK D P ALS   + E + L SI          S     ++   IDW
Sbjct:   14 ERDVRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDW 171          
The following BLAST results are available for this feature:
BLAST of CX671429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
ARF3_YEAST5.797e-1930.41ADP-ribosylation factor 3 OS=Saccharomyces cerevis... [more]
SAR1B_ARATH7.571e-1936.60GTP-binding protein SAR1B OS=Arabidopsis thaliana ... [more]
ARL2_MOUSE7.571e-1932.70ADP-ribosylation factor-like protein 2 OS=Mus musc... [more]
SAR1A_BRACM9.888e-1937.41GTP-binding protein SAR1A OS=Brassica campestris G... [more]
SAR1A_DICDI1.687e-1835.48GTP-binding protein Sar1A OS=Dictyostelium discoid... [more]
ARF5_ARATH1.687e-1835.56Probable ADP-ribosylation factor At2g18390 OS=Arab... [more]
SAR1_USTMA2.203e-1832.89Small COPII coat GTPase SAR1 OS=Ustilago maydis GN... [more]
SAR1_CRYNE2.203e-1836.84Small COPII coat GTPase SAR1 OS=Cryptococcus neofo... [more]
ARL_SCHPO2.203e-1831.45ADP-ribosylation factor-like protein alp41 OS=Schi... [more]
ARL2_RAT2.203e-1832.08ADP-ribosylation factor-like protein 2 OS=Rattus n... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A05-B9-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671429 ID=CX671429; Name=CX671429; organism=Citrus sinensis; type=EST; length=774bp
GCAAGAAAAGTTTTTTCGCTTTTTCCCAGCTTTTATACTTCAAAGGCGAA
ACCCTAGCTTCTTATTTTGTCGAATAAAAGATGGGATTATGGGAAGCTTT
TCTCAACTGGCTTCGAAGTCTCTTCTTTAAACAAGAAATGGAGCTATCTT
TGATAGGGCTTCAGAATGCAGGCAAGACATCCCTTGTGAATGTTATCGCA
ACTGGTGGATATAGTGAAGATATGATCCCAACAGTAGGATTTAATATGAG
GAAAGTGACTAAGGGGAATGTCACAATAAAGCTGTGGGATCTTGGAGGCC
AACCACGGTTTCGCAGTATGTGGGAGAGATACTGTCGTGCAGTTTCAGCT
ATTGTTTACGTTGTTGATGCTGCTGATTATGATAACTTGCCTGTGTCAAG
AAGTGAACTCCATGACTTGTTAAGTAAACCCTCGCTGAATGGTATCCCAT
TGCTGGTACTGGGAAACAAGATTGATAAACCAGAAGCCTTGTCTAAAGAG
GATCTGATGGAACAAATGGGGCTGAAGTCCATTACCGATAGAGAAGTTTG
TTGCTACATGATTTCATGCAAAAACTCTACCAACATTGACACGGTTATTG
ATTGGCTTGTAAAGCATTCAAAATCAAAGAGTTGAGTTTCTTCCTCTAGT
TTTGAACTACATGGGAGCCTGTTTTCAACAACTGATTCAGGATGAGTTGA
GTGAGCTGTACTGTTAGTCTGCTCGGGTCAGTCGATGTGTGACCATAGTT
TTTTATTTCGACTTGGCTTTTTAT
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