CX671429

Overview
NameCX671429
Unique NameCX671429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL14_MOUSE (ADP-ribosylation factor-like protein 14 OS=Mus musculus GN=Arl14 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.426e-17
Identity = 48/150 (32.00%), Postives = 85/150 (56.67%), Query Frame = 3
Query:  132 QEMELSLIGLQNAGKTSLVNVIATGGYSEDM--IPTVGFNMRKVT-KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAAD-YDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR-----EVCC 554
            ++  + L+GL +AGK++L+  +    ++E +  IPT+GFN+  V  + ++T+ +WD+GGQ + R++W+ YC     ++YVVD ++    L  SR E   +L    +   P+++L NK D P ALS ED+     +K +        + CC
Sbjct:   12 KQAHILLLGLDSAGKSTLLYRLK---FAETLATIPTIGFNVEMVQLQSSLTLTVWDVGGQEKMRTVWDCYCENAQGLMYVVDCSEGKKRLEDSRKEFKHILKNEHIKNTPVVILANKQDLPGALSAEDITRMFKVKKLCSNRNWYVQPCC 158          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARD1_RAT (GTP-binding protein ARD-1 (Fragment) OS=Rattus norvegicus GN=Trim23 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.426e-17
Identity = 51/165 (30.91%), Postives = 88/165 (53.33%), Query Frame = 3
Query:  129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCC----YMISC--KNSTNIDTVIDW 605
            K E+ +  +GL  AGKT+++  +    + +  IPT+GFN+  V   N+   +WD+G + + R +W+ Y     A+V+VVD++  D +  + SEL  LL++  L    LL+  NK D   ALS E++ E + L      ++CC    Y+  C  ++   +   +DW
Sbjct:  382 KMEIRVVTLGLDGAGKTTILFKLKQDEFMQP-IPTIGFNVETVEYKNLKFTIWDVGEKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSL-----HKLCCGRSWYIQGCDARSGMGLYEGLDW 540          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1_CANGA (Small COPII coat GTPase SAR1 OS=Candida glabrata GN=SAR1 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.255e-17
Identity = 50/155 (32.26%), Postives = 85/155 (54.84%), Query Frame = 3
Query:   87 LWEAFLNWLRSLF-----FKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSIT 536
            +W+ F  W R +      + +  +L  +GL NAGKT+L++++     +  + PT      ++  GN+    +DLGG  + R +W+ Y   V+ IV++VD+AD D    +R EL  L +   L  +P ++LGNKID   A+S+ +L   +GL + T
Sbjct:    2 VWDVF-GWFRDVLASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLAT-LQPTWHPTSEELAIGNIKFTTFDLGGHVQARRLWKDYFPEVNGIVFLVDSADPDRFDEARVELDALFNITELKDVPFVILGNKIDAANAVSEAELRSALGLLNTT 154          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF_ENCCU (ADP-ribosylation factor OS=Encephalitozoon cuniculi GN=ARF-1 PE=1 SV=3)

HSP 1 Score: 87.4261 bits (215), Expect = 9.255e-17
Identity = 53/124 (42.74%), Postives = 72/124 (58.06%), Query Frame = 3
Query:  111 LRSLFFKQ-EMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNG-IPLLVLGNKID 476
            LR LF  Q E  +++IGL  AGKT+L+  + TG   +  +PT+GFN   VT G++  ++WD+GGQ  F   W +Y      I+Y+VD AD      S  EL  +L+   LN   PLLVL NKID
Sbjct:   16 LRGLFSGQSERSITMIGLDGAGKTTLLLYLQTGEVHQT-VPTLGFNCENVTLGSMKFQVWDIGGQNSFMRFWHQYINEGCGIIYMVDCADPQRFGKSGEELWRILN--ILNSPRPLLVLANKID 136          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARFRP_BOVIN (ADP-ribosylation factor-related protein 1 OS=Bos taurus GN=ARFRP1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.255e-17
Identity = 45/136 (33.09%), Postives = 72/136 (52.94%), Query Frame = 3
Query:  120 LFFKQEMELSLIGLQNAGKTSLVNVIAT-------GGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDL 506
            +F K E  + ++GL NAGKT+ +    T       G     +  TVG N+  V  G   +  WDLGGQ   +S+W++Y      ++YV+D+ D + L  S+     +++  +L+G+P+LVL NK D    LS  D+
Sbjct:   12 MFQKDEYCVLILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKQAFEKMVTSEALDGVPILVLANKQDVETCLSIPDI 147          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL6_CAEEL (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis elegans GN=arl-6 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16
Identity = 45/147 (30.61%), Postives = 89/147 (60.54%), Query Frame = 3
Query:   99 FLNWLRSLFF--KQEMELSLIGLQNAGKTSLVNVIATGGY-SEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSL--NGIPLLVLGNKIDKPEALSKEDLMEQMGL 524
            F + L SLF   K+++ + ++GL N+GKT+++N + T    S+ ++PTVG  +   +  N++   +D+ GQ ++RS WE Y  +   +++V+D++D   + + + EL  ++    +   GIP+++L NK+D P A++  D+   +GL
Sbjct:    3 FFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIPGAMTASDITVALGL 149          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL6_CAEBR (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis briggsae GN=arl-6 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16
Identity = 46/147 (31.29%), Postives = 90/147 (61.22%), Query Frame = 3
Query:   99 FLNWLRSLFF--KQEMELSLIGLQNAGKTSLVNVIATGGY-SEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSL--NGIPLLVLGNKIDKPEALSKEDLMEQMGL 524
            FL+ L +LF   K+++ + ++GL N+GKT+++N + T    S+ ++PTVG  +   +  N++   +D+ GQ ++RS WE Y  +   +++V+D++D   + + + EL  +L    +   GIP+++L NK+D P A++  D+   +GL
Sbjct:    3 FLSSLSNLFGMGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRVRMELLKDELWLVLDHKDVASRGIPVVILANKMDIPGAMTCADITAALGL 149          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL5B_MOUSE (ADP-ribosylation factor-like protein 5B OS=Mus musculus GN=Arl5b PE=2 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16
Identity = 47/152 (30.92%), Postives = 78/152 (51.32%), Query Frame = 3
Query:  111 LRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR----EVCC 554
            L SLF  QE ++ ++GL NAGKT+++             PT+G N+ ++   N    +WD+GGQ   RS W  Y      I+ VVD+ D + L +++ EL+ +L+   L    +L+  NK D    ++  ++ + + L SI D     + CC
Sbjct:    8 LWSLFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTS-PTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCC 158          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL5B_HUMAN (ADP-ribosylation factor-like protein 5B OS=Homo sapiens GN=ARL5B PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16
Identity = 47/152 (30.92%), Postives = 78/152 (51.32%), Query Frame = 3
Query:  111 LRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR----EVCC 554
            L SLF  QE ++ ++GL NAGKT+++             PT+G N+ ++   N    +WD+GGQ   RS W  Y      I+ VVD+ D + L +++ EL+ +L+   L    +L+  NK D    ++  ++ + + L SI D     + CC
Sbjct:    8 LWSLFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTS-PTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCC 158          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16
Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 3
Query:  120 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR----EVCC 554
            LF  QE ++ ++GL NAGKT+++   +         PT+G N+ ++   N    +WD+GGQ   RS W  Y      ++ VVD+ D + + V+R EL+ +L+   L    LL+  NK D    ++  ++ + + L SI D     + CC
Sbjct:   11 LFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTS-PTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKGCMTVAEISQFLKLTSIKDHQWHIQACC 158          
The following BLAST results are available for this feature:
BLAST of CX671429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
ARL14_MOUSE5.426e-1732.00ADP-ribosylation factor-like protein 14 OS=Mus mus... [more]
ARD1_RAT5.426e-1730.91GTP-binding protein ARD-1 (Fragment) OS=Rattus nor... [more]
SAR1_CANGA9.255e-1732.26Small COPII coat GTPase SAR1 OS=Candida glabrata G... [more]
ARF_ENCCU9.255e-1742.74ADP-ribosylation factor OS=Encephalitozoon cunicul... [more]
ARFRP_BOVIN9.255e-1733.09ADP-ribosylation factor-related protein 1 OS=Bos t... [more]
ARL6_CAEEL1.209e-1630.61ADP-ribosylation factor-like protein 6 OS=Caenorha... [more]
ARL6_CAEBR1.209e-1631.29ADP-ribosylation factor-like protein 6 OS=Caenorha... [more]
ARL5B_MOUSE1.209e-1630.92ADP-ribosylation factor-like protein 5B OS=Mus mus... [more]
ARL5B_HUMAN1.209e-1630.92ADP-ribosylation factor-like protein 5B OS=Homo sa... [more]
ARL5A_BOVIN1.209e-1630.87ADP-ribosylation factor-like protein 5A OS=Bos tau... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A05-B9-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671429 ID=CX671429; Name=CX671429; organism=Citrus sinensis; type=EST; length=774bp
GCAAGAAAAGTTTTTTCGCTTTTTCCCAGCTTTTATACTTCAAAGGCGAA
ACCCTAGCTTCTTATTTTGTCGAATAAAAGATGGGATTATGGGAAGCTTT
TCTCAACTGGCTTCGAAGTCTCTTCTTTAAACAAGAAATGGAGCTATCTT
TGATAGGGCTTCAGAATGCAGGCAAGACATCCCTTGTGAATGTTATCGCA
ACTGGTGGATATAGTGAAGATATGATCCCAACAGTAGGATTTAATATGAG
GAAAGTGACTAAGGGGAATGTCACAATAAAGCTGTGGGATCTTGGAGGCC
AACCACGGTTTCGCAGTATGTGGGAGAGATACTGTCGTGCAGTTTCAGCT
ATTGTTTACGTTGTTGATGCTGCTGATTATGATAACTTGCCTGTGTCAAG
AAGTGAACTCCATGACTTGTTAAGTAAACCCTCGCTGAATGGTATCCCAT
TGCTGGTACTGGGAAACAAGATTGATAAACCAGAAGCCTTGTCTAAAGAG
GATCTGATGGAACAAATGGGGCTGAAGTCCATTACCGATAGAGAAGTTTG
TTGCTACATGATTTCATGCAAAAACTCTACCAACATTGACACGGTTATTG
ATTGGCTTGTAAAGCATTCAAAATCAAAGAGTTGAGTTTCTTCCTCTAGT
TTTGAACTACATGGGAGCCTGTTTTCAACAACTGATTCAGGATGAGTTGA
GTGAGCTGTACTGTTAGTCTGCTCGGGTCAGTCGATGTGTGACCATAGTT
TTTTATTTCGACTTGGCTTTTTAT
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