CX671429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL14_MOUSE (ADP-ribosylation factor-like protein 14 OS=Mus musculus GN=Arl14 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.426e-17 Identity = 48/150 (32.00%), Postives = 85/150 (56.67%), Query Frame = 3 Query: 132 QEMELSLIGLQNAGKTSLVNVIATGGYSEDM--IPTVGFNMRKVT-KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAAD-YDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR-----EVCC 554 ++ + L+GL +AGK++L+ + ++E + IPT+GFN+ V + ++T+ +WD+GGQ + R++W+ YC ++YVVD ++ L SR E +L + P+++L NK D P ALS ED+ +K + + CC Sbjct: 12 KQAHILLLGLDSAGKSTLLYRLK---FAETLATIPTIGFNVEMVQLQSSLTLTVWDVGGQEKMRTVWDCYCENAQGLMYVVDCSEGKKRLEDSRKEFKHILKNEHIKNTPVVILANKQDLPGALSAEDITRMFKVKKLCSNRNWYVQPCC 158
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARD1_RAT (GTP-binding protein ARD-1 (Fragment) OS=Rattus norvegicus GN=Trim23 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.426e-17 Identity = 51/165 (30.91%), Postives = 88/165 (53.33%), Query Frame = 3 Query: 129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCC----YMISC--KNSTNIDTVIDW 605 K E+ + +GL AGKT+++ + + + IPT+GFN+ V N+ +WD+G + + R +W+ Y A+V+VVD++ D + + SEL LL++ L LL+ NK D ALS E++ E + L ++CC Y+ C ++ + +DW Sbjct: 382 KMEIRVVTLGLDGAGKTTILFKLKQDEFMQP-IPTIGFNVETVEYKNLKFTIWDVGEKHKLRPLWKHYYLNTQAVVFVVDSSHRDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSL-----HKLCCGRSWYIQGCDARSGMGLYEGLDW 540
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1_CANGA (Small COPII coat GTPase SAR1 OS=Candida glabrata GN=SAR1 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.255e-17 Identity = 50/155 (32.26%), Postives = 85/155 (54.84%), Query Frame = 3 Query: 87 LWEAFLNWLRSLF-----FKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSIT 536 +W+ F W R + + + +L +GL NAGKT+L++++ + + PT ++ GN+ +DLGG + R +W+ Y V+ IV++VD+AD D +R EL L + L +P ++LGNKID A+S+ +L +GL + T Sbjct: 2 VWDVF-GWFRDVLASLGLWNKHGKLLFLGLDNAGKTTLLHMLKNDRLAT-LQPTWHPTSEELAIGNIKFTTFDLGGHVQARRLWKDYFPEVNGIVFLVDSADPDRFDEARVELDALFNITELKDVPFVILGNKIDAANAVSEAELRSALGLLNTT 154
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF_ENCCU (ADP-ribosylation factor OS=Encephalitozoon cuniculi GN=ARF-1 PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 9.255e-17 Identity = 53/124 (42.74%), Postives = 72/124 (58.06%), Query Frame = 3 Query: 111 LRSLFFKQ-EMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNG-IPLLVLGNKID 476 LR LF Q E +++IGL AGKT+L+ + TG + +PT+GFN VT G++ ++WD+GGQ F W +Y I+Y+VD AD S EL +L+ LN PLLVL NKID Sbjct: 16 LRGLFSGQSERSITMIGLDGAGKTTLLLYLQTGEVHQT-VPTLGFNCENVTLGSMKFQVWDIGGQNSFMRFWHQYINEGCGIIYMVDCADPQRFGKSGEELWRILN--ILNSPRPLLVLANKID 136
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARFRP_BOVIN (ADP-ribosylation factor-related protein 1 OS=Bos taurus GN=ARFRP1 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 9.255e-17 Identity = 45/136 (33.09%), Postives = 72/136 (52.94%), Query Frame = 3 Query: 120 LFFKQEMELSLIGLQNAGKTSLVNVIAT-------GGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDL 506 +F K E + ++GL NAGKT+ + T G + TVG N+ V G + WDLGGQ +S+W++Y ++YV+D+ D + L S+ +++ +L+G+P+LVL NK D LS D+ Sbjct: 12 MFQKDEYCVLILGLDNAGKTTFLEQSKTRFNKNYKGMSLSKITTTVGLNIGTVDVGKARLMFWDLGGQEELQSLWDKYYAECHGVIYVIDSTDEERLSESKQAFEKMVTSEALDGVPILVLANKQDVETCLSIPDI 147
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL6_CAEEL (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis elegans GN=arl-6 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16 Identity = 45/147 (30.61%), Postives = 89/147 (60.54%), Query Frame = 3 Query: 99 FLNWLRSLFF--KQEMELSLIGLQNAGKTSLVNVIATGGY-SEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSL--NGIPLLVLGNKIDKPEALSKEDLMEQMGL 524 F + L SLF K+++ + ++GL N+GKT+++N + T S+ ++PTVG + + N++ +D+ GQ ++RS WE Y + +++V+D++D + + + EL ++ + GIP+++L NK+D P A++ D+ +GL Sbjct: 3 FFSSLSSLFGLGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRLRMELLKDELMMVMEHKDVVSRGIPIVILANKMDIPGAMTASDITVALGL 149
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL6_CAEBR (ADP-ribosylation factor-like protein 6 OS=Caenorhabditis briggsae GN=arl-6 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16 Identity = 46/147 (31.29%), Postives = 90/147 (61.22%), Query Frame = 3 Query: 99 FLNWLRSLFF--KQEMELSLIGLQNAGKTSLVNVIATGGY-SEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSL--NGIPLLVLGNKIDKPEALSKEDLMEQMGL 524 FL+ L +LF K+++ + ++GL N+GKT+++N + T S+ ++PTVG + + N++ +D+ GQ ++RS WE Y + +++V+D++D + + + EL +L + GIP+++L NK+D P A++ D+ +GL Sbjct: 3 FLSSLSNLFGMGKKDVNIVVVGLDNSGKTTILNQLKTPETRSQQIVPTVGHVVTNFSTQNLSFHAFDMAGQMKYRSTWESYFHSSQGVIFVLDSSDRVRMELLKDELWLVLDHKDVASRGIPVVILANKMDIPGAMTCADITAALGL 149
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL5B_MOUSE (ADP-ribosylation factor-like protein 5B OS=Mus musculus GN=Arl5b PE=2 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16 Identity = 47/152 (30.92%), Postives = 78/152 (51.32%), Query Frame = 3 Query: 111 LRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR----EVCC 554 L SLF QE ++ ++GL NAGKT+++ PT+G N+ ++ N +WD+GGQ RS W Y I+ VVD+ D + L +++ EL+ +L+ L +L+ NK D ++ ++ + + L SI D + CC Sbjct: 8 LWSLFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTS-PTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCC 158
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL5B_HUMAN (ADP-ribosylation factor-like protein 5B OS=Homo sapiens GN=ARL5B PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16 Identity = 47/152 (30.92%), Postives = 78/152 (51.32%), Query Frame = 3 Query: 111 LRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR----EVCC 554 L SLF QE ++ ++GL NAGKT+++ PT+G N+ ++ N +WD+GGQ RS W Y I+ VVD+ D + L +++ EL+ +L+ L +L+ NK D ++ ++ + + L SI D + CC Sbjct: 8 LWSLFCNQEHKVIIVGLDNAGKTTILYQFLMNEVVHTS-PTIGSNVEEIVVKNTHFLMWDIGGQESLRSSWNTYYSNTEFIILVVDSIDRERLAITKEELYRMLAHEDLRKAAVLIFANKQDMKGCMTAAEISKYLTLSSIKDHPWHIQSCC 158
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.209e-16 Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 3 Query: 120 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR----EVCC 554 LF QE ++ ++GL NAGKT+++ + PT+G N+ ++ N +WD+GGQ RS W Y ++ VVD+ D + + V+R EL+ +L+ L LL+ NK D ++ ++ + + L SI D + CC Sbjct: 11 LFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTS-PTIGSNVEEIVINNTRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAGLLIFANKQDVKGCMTVAEISQFLKLTSIKDHQWHIQACC 158 The following BLAST results are available for this feature:
BLAST of CX671429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671429 ID=CX671429; Name=CX671429; organism=Citrus sinensis; type=EST; length=774bpback to top |