CX671429

Overview
NameCX671429
Unique NameCX671429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL15_PONAB (ADP-ribosylation factor-like protein 15 OS=Pongo abelii GN=ARL15 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.999e-16
Identity = 44/136 (32.35%), Postives = 78/136 (57.35%), Query Frame = 3
Query:  129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADY-DNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSI 533
            + E +L  IGL  +GKTSL++ + +    ++++ T GF+++ V   N  + + +LGG    R  W RY +    +++V+D+A   D+L  +R+ELH  L  P L  +P L+L N  DKP A S +++ +   L+ +
Sbjct:   30 RPEYDLVCIGLTGSGKTSLLSKLCSES-PDNVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARNELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPL 164          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL15_HUMAN (ADP-ribosylation factor-like protein 15 OS=Homo sapiens GN=ARL15 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.999e-16
Identity = 44/136 (32.35%), Postives = 78/136 (57.35%), Query Frame = 3
Query:  129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADY-DNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSI 533
            + E +L  IGL  +GKTSL++ + +    ++++ T GF+++ V   N  + + +LGG    R  W RY +    +++V+D+A   D+L  +R+ELH  L  P L  +P L+L N  DKP A S +++ +   L+ +
Sbjct:   30 RPEYDLVCIGLTGSGKTSLLSKLCSES-PDNVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLEAARNELHSALQHPQLCTLPFLILANHQDKPAARSVQEIKKYFELEPL 164          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.023e-15
Identity = 45/150 (30.00%), Postives = 81/150 (54.00%), Query Frame = 3
Query:   99 FLNWLRSLF-----FKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSI 533
            F +W +S       +K++  +  +GL NAGK++L+ ++     +  + PT     +++  G++  K +DLGG    R +WE+Y      IV++VD+AD      SR  L +LL    L   P+L+L NK+D   A+S E +++  G++ +
Sbjct:    3 FGDWFKSALSFLGLYKKKATIVFVGLDNAGKSTLLAMLKNSA-TTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHL 151          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL15_BOVIN (ADP-ribosylation factor-like protein 15 OS=Bos taurus GN=ARL15 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.023e-15
Identity = 44/136 (32.35%), Postives = 77/136 (56.62%), Query Frame = 3
Query:  129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADY-DNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSI 533
            + E +L  IGL  +GKTSL++ + +    + ++ T GF+++ V   N  + + +LGG    R  W RY +    +++V+D+A   D+L  +R+ELH  L  P L  +P L+L N  DKP A S +++ +   L+ +
Sbjct:   30 RPEYDLVCIGLTGSGKTSLLSKLCSES-PDSVVSTTGFSIKAVPFQNAILNVKELGGADNIRKYWSRYYQGSQGVIFVLDSASSEDDLETARNELHSALQHPQLCTLPFLILANHQDKPAARSVQEVKKYFELEPL 164          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARFF_DICDI (ADP-ribosylation factor F OS=Dictyostelium discoideum GN=arrF PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.023e-15
Identity = 45/171 (26.32%), Postives = 87/171 (50.88%), Query Frame = 3
Query:   99 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLL--SKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            F+N       K+ + + +IGL  AGK++L+  +  G      IPT+GFN+  +   N+++ +WD+GGQ   R++W +Y +     ++VVD+ D +     + E+ +++  +K   +   LL+  NK D    ++  +L+  + L S+T+++      S      I    DW
Sbjct:   13 FVNIFSLFEGKRNIRILMIGLDGAGKSTLLYKLKFGDVIRT-IPTIGFNVEIIEYKNLSMNVWDIGGQNNIRALWRQYDQRTDVFIFVVDSTDRERFDEVKQEIKNIIEQNKNESSNASLLIFANKQDMLNPITPAELVNSLDLNSLTNKKWHVQPCSAVRGDGIYEGFDW 182          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL5_DICDI (ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum GN=arl5 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15
Identity = 50/179 (27.93%), Postives = 85/179 (47.49%), Query Frame = 3
Query:   87 LWEAFLNWLRSLFFKQEMELSLIGLQNAGKTS------LVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            +W  F N         E ++ ++GL  AGKT+      L  V++T        PTVG N+ +    N+ + +WDLGGQ   RS W +Y     A++ V+D+ D   + + + EL  +L+  +L    +L+  NK D  +A+S  +L   + L SI D +             +++ +DW
Sbjct:   11 IWNRFFN-------NAEYKVIIVGLNAAGKTTTLYKLLLDEVVST-------TPTVGSNLEEFVYRNIRLLMWDLGGQDLLRSTWNQYYINTQAVILVIDSTDRARVNLIKEELFKMLAHENLKKSIILIYANKQDLKDAMSPTELSTLLSLHSIKDHDYHIQACCALTGQGLESGLDW 175          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL5C_MOUSE (ADP-ribosylation factor-like protein 5C OS=Mus musculus GN=Arl5c PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.280e-15
Identity = 43/152 (28.29%), Postives = 79/152 (51.97%), Query Frame = 3
Query:  111 LRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR----EVCC 554
            L  +F  QE ++ ++GL NAGKT+++    T         T+G N+ ++        +WDLGGQ   RS W+ Y      ++ V+D+ D + L  +R EL+ +L+  +L    +L+  NK D  ++++  ++ + + L +I D     + CC
Sbjct:    8 LMRIFGSQEHKVIIVGLDNAGKTTILYQFLTNEVVHTC-STIGSNVEEIVLRKTHFLMWDLGGQEALRSTWDTYYSNAEFVILVIDSTDRNRLLTTREELYKMLAHEALQNASVLIFANKQDVKDSMTTAEISQFLTLSAIKDHPWHIQGCC 158          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL9_HUMAN (ADP-ribosylation factor-like protein 9 OS=Homo sapiens GN=ARL9 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.292e-14
Identity = 42/141 (29.79%), Postives = 78/141 (55.32%), Query Frame = 3
Query:  129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSI-TDREV 548
            ++  ++ ++GL  AGKTS+++ +A+      + PT GF+   +   +  ++  ++GG   FRS WE Y      +++VVD+AD+  LP ++  LH L++   +  +PL+V  NK D   A    D+ E + L  +  DR++
Sbjct:   16 EKNKQILVLGLDGAGKTSVLHSLASNRVQHSVAPTQGFHAVCINTEDSQMEFLEIGGSKPFRSYWEMYLSKGLLLIFVVDSADHSRLPEAKKYLHQLIAANPV--LPLVVFANKQDLEAAYHITDIHEALALSEVGNDRKM 154          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL3_PONAB (ADP-ribosylation factor-like protein 3 OS=Pongo abelii GN=ARL3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.634e-13
Identity = 46/158 (29.11%), Postives = 77/158 (48.73%), Query Frame = 3
Query:  132 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            QE+ + L+GL NAGKT+L+  +A+   S  + PT GFN++ V      + +WD+GGQ + R  W+ Y               ++N  +   EL +LL +  L+ +P+L+  NK D   A    ++ E + L +I DR       S      +   ++W
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWKNY---------------FENTDI--LELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNW 155          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL10_MOUSE (ADP-ribosylation factor-like protein 10 OS=Mus musculus GN=Arl10 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.639e-13
Identity = 41/140 (29.29%), Postives = 77/140 (55.00%), Query Frame = 3
Query:  132 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMG-LKSITDREV 548
            ++ E+ ++GL  +GK++ + ++A     E  +PT GFN  ++   N  + L ++G     R  W+ +   V  +V++VD+ D   LP +R EL  LL +     +P++++ NK D   A++  +L +++G L S   REV
Sbjct:   75 EQREVLVLGLDGSGKSTFLRMLAGKPPVEGHVPTWGFNSVRLPTKNFEVDLLEIGDSQNLRFYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQKLLDRDP--DLPVVIVANKQDLSGAMNMVELQQELGLLASYNQREV 212          
The following BLAST results are available for this feature:
BLAST of CX671429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
ARL15_PONAB5.999e-1632.35ADP-ribosylation factor-like protein 15 OS=Pongo a... [more]
ARL15_HUMAN5.999e-1632.35ADP-ribosylation factor-like protein 15 OS=Homo sa... [more]
SAR1_GIALA1.023e-1530.00GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR... [more]
ARL15_BOVIN1.023e-1532.35ADP-ribosylation factor-like protein 15 OS=Bos tau... [more]
ARFF_DICDI1.023e-1526.32ADP-ribosylation factor F OS=Dictyostelium discoid... [more]
ARL5_DICDI1.336e-1527.93ADP-ribosylation factor-like protein 5 OS=Dictyost... [more]
ARL5C_MOUSE2.280e-1528.29ADP-ribosylation factor-like protein 5C OS=Mus mus... [more]
ARL9_HUMAN3.292e-1429.79ADP-ribosylation factor-like protein 9 OS=Homo sap... [more]
ARL3_PONAB1.634e-1329.11ADP-ribosylation factor-like protein 3 OS=Pongo ab... [more]
ARL10_MOUSE3.639e-1329.29ADP-ribosylation factor-like protein 10 OS=Mus mus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A05-B9-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671429 ID=CX671429; Name=CX671429; organism=Citrus sinensis; type=EST; length=774bp
GCAAGAAAAGTTTTTTCGCTTTTTCCCAGCTTTTATACTTCAAAGGCGAA
ACCCTAGCTTCTTATTTTGTCGAATAAAAGATGGGATTATGGGAAGCTTT
TCTCAACTGGCTTCGAAGTCTCTTCTTTAAACAAGAAATGGAGCTATCTT
TGATAGGGCTTCAGAATGCAGGCAAGACATCCCTTGTGAATGTTATCGCA
ACTGGTGGATATAGTGAAGATATGATCCCAACAGTAGGATTTAATATGAG
GAAAGTGACTAAGGGGAATGTCACAATAAAGCTGTGGGATCTTGGAGGCC
AACCACGGTTTCGCAGTATGTGGGAGAGATACTGTCGTGCAGTTTCAGCT
ATTGTTTACGTTGTTGATGCTGCTGATTATGATAACTTGCCTGTGTCAAG
AAGTGAACTCCATGACTTGTTAAGTAAACCCTCGCTGAATGGTATCCCAT
TGCTGGTACTGGGAAACAAGATTGATAAACCAGAAGCCTTGTCTAAAGAG
GATCTGATGGAACAAATGGGGCTGAAGTCCATTACCGATAGAGAAGTTTG
TTGCTACATGATTTCATGCAAAAACTCTACCAACATTGACACGGTTATTG
ATTGGCTTGTAAAGCATTCAAAATCAAAGAGTTGAGTTTCTTCCTCTAGT
TTTGAACTACATGGGAGCCTGTTTTCAACAACTGATTCAGGATGAGTTGA
GTGAGCTGTACTGTTAGTCTGCTCGGGTCAGTCGATGTGTGACCATAGTT
TTTTATTTCGACTTGGCTTTTTAT
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