CX671429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARD1_CAEEL (Putative GTP-binding protein ard-1 homolog OS=Caenorhabditis elegans GN=arc-1 PE=2 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 4.753e-13 Identity = 47/159 (29.56%), Postives = 73/159 (45.91%), Query Frame = 3 Query: 135 EMELSLIGLQNAGKTSLVNVIATGGYSEDMIP--TVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKED-LMEQMGLKSITDREVCCYMISCKNSTNIDTVID 602 E + L+GL AGKTS+V + M P T+GFN+ + N + WD+GG P+ R +W+ Y AI YV+D + + EL+ ++S P + P++V N+ D D L+ Q+ CC + ID +ID Sbjct: 369 ESRVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHYKNYRLNFWDVGGLPKLRHLWKHYYSNAQAIFYVIDGYAVERFSEAIKELNRVMSDPLVGTCPVIVAVNRKDGYALNGHMDALLSQLEALPFQHHFHCC---DAATGSGIDQIID 524
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARLX_DICDI (ADP-ribosylation factor-like protein DDB_G0292332 OS=Dictyostelium discoideum GN=DDB_G0292332 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12 Identity = 48/182 (26.37%), Postives = 100/182 (54.95%), Query Frame = 3 Query: 102 LNWLRSLF-FKQEMELSLIGLQNAGKTSLVNVIATGGYSEDM-----------IPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRA-VSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKID-KPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 ++++++LF F ++ ++G++N GKT+L+ I YSE++ IPT GFN+ + V +WD+GG+ R + Y + + +I++V D++D ++L S+ E L ++ SL +P L++ NK D K + + +++++ KS + + ++S N+ ++ I+W Sbjct: 5 ISFIKNLFGFLTIKKVMILGVENVGKTTLLYNIYKF-YSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLKQQTIEIDEILKTYFDKSSINETI---LMSQNNNDDLIKCINW 182
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL5C_HUMAN (Putative ADP-ribosylation factor-like protein 5C OS=Homo sapiens GN=ARL5C PE=2 SV=4) HSP 1 Score: 72.0182 bits (175), Expect = 4.024e-12 Identity = 41/152 (26.97%), Postives = 73/152 (48.03%), Query Frame = 3 Query: 111 LRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR----EVCC 554 L S+F QE + ++GL N GKT+++ T M PT+G N+ ++ +WD+ +W Y I+ V+D+ D D L +R EL+ +L+ +L +L+ NK D +++ ++ + L +I D + CC Sbjct: 8 LMSIFGNQEHTVIIVGLDNEGKTTILYRFLTNEVVH-MCPTIGSNVEEIILPKTHFFMWDIVRPEALSFIWNTYYSNTEFIILVIDSTDRDRLLTTREELYKMLAHEALQDASVLIFANKQDVKDSMRMVEISHFLTLSTIKDHSWHIQGCC 158
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: CIN4_YEAST (GTP-binding protein CIN4 OS=Saccharomyces cerevisiae GN=CIN4 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.529e-11 Identity = 47/168 (27.98%), Postives = 87/168 (51.79%), Query Frame = 3 Query: 132 QEMELSLIGLQNAGKTSLVNVIATGGY--SEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGI----PLLVLGNKIDKPE---ALSKEDLMEQMGLKSITDREVCCYMISCKNST--NIDTVID 602 +E+ ++GL N+GK+++VN + ++ ++PTVGF + + +VTI LWD+GGQ R W+ Y A+++ +D + + EL +L+++ N I ++V+ NKID E L + L+ + LK + ++ ++ C T ID + D Sbjct: 15 KEIRCLILGLDNSGKSTIVNKLLPKDEQNNDGIMPTVGFQIHSLMIKDVTISLWDIGGQRTLRPFWDNYFDKTQAMIWCIDVSLSMRFDETLQELKELINRDE-NRIGYECAVIVVLNKIDLVEDKSELHRRCLLVESELKCLFKPDIRIELVKCSGVTGEGIDNLRD 181
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: RAB7B_BOVIN (Ras-related protein Rab-7b OS=Bos taurus GN=RAB7B PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.811e-11 Identity = 46/159 (28.93%), Postives = 80/159 (50.31%), Query Frame = 3 Query: 129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNM--RKVTKGNVTIKL--WDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSK--PSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNI 587 K +++L +IG GKTSL++ + ED T+G ++ + + + T+KL WD GGQ RFRSM + + V D D ++ + D+L+K P P++VLGNKID L + +++ ++++ + +S KN N+ Sbjct: 6 KVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQIWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTIPMEQPYPMVVLGNKID----LEDRQVPQEVAQGWCKEKDIPYFEVSAKNDINV 160
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: YPT7_YEAST (GTP-binding protein YPT7 OS=Saccharomyces cerevisiae GN=YPT7 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.589e-11 Identity = 51/169 (30.18%), Postives = 85/169 (50.30%), Query Frame = 3 Query: 129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVG--FNMRKVTKGN---VTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVD---AADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMG---LKSITDREVCCYMISCKNSTNIDTVID 602 K +++ ++G GKTSL++ YS+ T+G F ++VT T+++WD GQ RF+S+ + R V V D A+ ++N+ R E + S P ++LGNKID E SK+ + E+ KS+ D + ++ S KN+ N+DT + Sbjct: 6 KNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEE--SKKIVSEKSAQELAKSLGD--IPLFLTSAKNAINVDTAFE 170 The following BLAST results are available for this feature:
BLAST of CX671429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671429 ID=CX671429; Name=CX671429; organism=Citrus sinensis; type=EST; length=774bpback to top |