CX671429

Overview
NameCX671429
Unique NameCX671429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 3.879e-23
Identity = 55/154 (35.71%), Postives = 90/154 (58.44%), Query Frame = 3
Query:   81 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542
            MGL  +F      LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++VVD+ D D +  +R ELH +L++  L    LLV  NK D P A++  ++ +++GL S+  R
Sbjct:    1 MGL--SFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQR 151          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 3.879e-23
Identity = 57/175 (32.57%), Postives = 95/175 (54.29%), Query Frame = 3
Query:   81 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            MGL  +F      LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++VVD+ D D +  +R ELH +L++  L    LLV  NK D P A++  ++ +++GL S+  R          +   +   +DW
Sbjct:    1 MGL--SFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_CHLRE (ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 5.067e-23
Identity = 57/175 (32.57%), Postives = 95/175 (54.29%), Query Frame = 3
Query:   81 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            MGL   F   L  LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++VVD+ D + +  +R ELH +L++  L    LLV  NK D P A++  ++ +++GL S+  R          +   +   +DW
Sbjct:    1 MGL--RFTKALSRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF_CANAL (ADP-ribosylation factor OS=Candida albicans GN=ARF1 PE=3 SV=4)

HSP 1 Score: 107.842 bits (268), Expect = 6.617e-23
Identity = 54/142 (38.03%), Postives = 86/142 (60.56%), Query Frame = 3
Query:  117 SLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542
            SL  ++EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    I++VVD+ D D +  +R EL  +L++  L    LLVL NK D P A++  ++ E+MGL SI +R
Sbjct:   11 SLLGRREMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRINEAREELQSMLNEDELKDAVLLVLANKQDLPNAMNAAEITEKMGLHSIMNR 151          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 6.617e-23
Identity = 56/175 (32.00%), Postives = 94/175 (53.71%), Query Frame = 3
Query:   81 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            MGL   F      LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++VVD+ D + +  +R ELH +L++  L    LLV  NK D P A++  ++ +++GL S+  R          +   +   +DW
Sbjct:    1 MGL--TFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 6.617e-23
Identity = 56/175 (32.00%), Postives = 94/175 (53.71%), Query Frame = 3
Query:   81 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            MGL   F      LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++VVD+ D + +  +R ELH +L++  L    LLV  NK D P A++  ++ +++GL S+  R          +   +   +DW
Sbjct:    1 MGL--TFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1B_DICDI (GTP-binding protein Sar1B OS=Dictyostelium discoideum GN=sarB PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.129e-22
Identity = 57/156 (36.54%), Postives = 97/156 (62.18%), Query Frame = 3
Query:  123 FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCR-AVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNI 587
            FFK+E ++ +IGL NAGKT+L++++ TG      IPT+  N    T GNV  K +DLGGQ   R +W++Y   + + IV++VD++DY+++  S+SE+HD+L    L+  PLL+LG+K D     ++E+L++ + ++         + +   NS N+
Sbjct:   16 FFKKEAKIVIIGLGNAGKTTLLHLLVTGSLKSH-IPTLRPNAESFTYGNVNFKAYDLGGQQNLRFLWKQYVPDSKTIIVFMVDSSDYNSIIESKSEIHDILGDEHLSQSPLLILGSKCDAKGHHNRENLIDLLDIRR--------FELGLNNSNNV 162          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_YEAST (ADP-ribosylation factor 1 OS=Saccharomyces cerevisiae GN=ARF1 PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 1.129e-22
Identity = 56/154 (36.36%), Postives = 90/154 (58.44%), Query Frame = 3
Query:   81 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542
            MGL+ + L    +LF  +EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ R RS+W  Y R    +++VVD+ D   +  +R  +  +L++  L     LV  NK D PEA+S  ++ E++GL SI +R
Sbjct:    1 MGLFASKL--FSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIGFNVETVQYKNISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLPEAMSAAEITEKLGLHSIRNR 151          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_LOCMI (ADP-ribosylation factor 1 OS=Locusta migratoria GN=ARF1 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.129e-22
Identity = 52/169 (30.77%), Postives = 93/169 (55.03%), Query Frame = 3
Query:   99 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            F N  + LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++VVD+ D + +  +R EL  +L++  L    LL+  NK D P A++  ++ +++GL S+ +R          +   +   +DW
Sbjct:    5 FANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDW 172          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_DROME (ADP-ribosylation factor 1 OS=Drosophila melanogaster GN=Arf79F PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.129e-22
Identity = 52/169 (30.77%), Postives = 93/169 (55.03%), Query Frame = 3
Query:   99 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            F N  + LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++VVD+ D + +  +R EL  +L++  L    LL+  NK D P A++  ++ +++GL S+ +R          +   +   +DW
Sbjct:    5 FANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDW 172          
The following BLAST results are available for this feature:
BLAST of CX671429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
ARF_VIGUN3.879e-2335.71ADP-ribosylation factor OS=Vigna unguiculata GN=AR... [more]
ARF1_ARATH3.879e-2332.57ADP-ribosylation factor 1 OS=Arabidopsis thaliana ... [more]
ARF1_CHLRE5.067e-2332.57ADP-ribosylation factor 1 OS=Chlamydomonas reinhar... [more]
ARF_CANAL6.617e-2338.03ADP-ribosylation factor OS=Candida albicans GN=ARF... [more]
ARF2_ORYSJ6.617e-2332.00ADP-ribosylation factor 2 OS=Oryza sativa subsp. j... [more]
ARF1_ORYSJ6.617e-2332.00ADP-ribosylation factor 1 OS=Oryza sativa subsp. j... [more]
SAR1B_DICDI1.129e-2236.54GTP-binding protein Sar1B OS=Dictyostelium discoid... [more]
ARF1_YEAST1.129e-2236.36ADP-ribosylation factor 1 OS=Saccharomyces cerevis... [more]
ARF1_LOCMI1.129e-2230.77ADP-ribosylation factor 1 OS=Locusta migratoria GN... [more]
ARF1_DROME1.129e-2230.77ADP-ribosylation factor 1 OS=Drosophila melanogast... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A05-B9-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671429 ID=CX671429; Name=CX671429; organism=Citrus sinensis; type=EST; length=774bp
GCAAGAAAAGTTTTTTCGCTTTTTCCCAGCTTTTATACTTCAAAGGCGAA
ACCCTAGCTTCTTATTTTGTCGAATAAAAGATGGGATTATGGGAAGCTTT
TCTCAACTGGCTTCGAAGTCTCTTCTTTAAACAAGAAATGGAGCTATCTT
TGATAGGGCTTCAGAATGCAGGCAAGACATCCCTTGTGAATGTTATCGCA
ACTGGTGGATATAGTGAAGATATGATCCCAACAGTAGGATTTAATATGAG
GAAAGTGACTAAGGGGAATGTCACAATAAAGCTGTGGGATCTTGGAGGCC
AACCACGGTTTCGCAGTATGTGGGAGAGATACTGTCGTGCAGTTTCAGCT
ATTGTTTACGTTGTTGATGCTGCTGATTATGATAACTTGCCTGTGTCAAG
AAGTGAACTCCATGACTTGTTAAGTAAACCCTCGCTGAATGGTATCCCAT
TGCTGGTACTGGGAAACAAGATTGATAAACCAGAAGCCTTGTCTAAAGAG
GATCTGATGGAACAAATGGGGCTGAAGTCCATTACCGATAGAGAAGTTTG
TTGCTACATGATTTCATGCAAAAACTCTACCAACATTGACACGGTTATTG
ATTGGCTTGTAAAGCATTCAAAATCAAAGAGTTGAGTTTCTTCCTCTAGT
TTTGAACTACATGGGAGCCTGTTTTCAACAACTGATTCAGGATGAGTTGA
GTGAGCTGTACTGTTAGTCTGCTCGGGTCAGTCGATGTGTGACCATAGTT
TTTTATTTCGACTTGGCTTTTTAT
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