CX671429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3) HSP 1 Score: 108.612 bits (270), Expect = 3.879e-23 Identity = 55/154 (35.71%), Postives = 90/154 (58.44%), Query Frame = 3 Query: 81 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542 MGL +F LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D D + +R ELH +L++ L LLV NK D P A++ ++ +++GL S+ R Sbjct: 1 MGL--SFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQR 151
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.879e-23 Identity = 57/175 (32.57%), Postives = 95/175 (54.29%), Query Frame = 3 Query: 81 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 MGL +F LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D D + +R ELH +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 1 MGL--SFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_CHLRE (ADP-ribosylation factor 1 OS=Chlamydomonas reinhardtii GN=ARF1 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 5.067e-23 Identity = 57/175 (32.57%), Postives = 95/175 (54.29%), Query Frame = 3 Query: 81 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 MGL F L LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R ELH +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 1 MGL--RFTKALSRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF_CANAL (ADP-ribosylation factor OS=Candida albicans GN=ARF1 PE=3 SV=4) HSP 1 Score: 107.842 bits (268), Expect = 6.617e-23 Identity = 54/142 (38.03%), Postives = 86/142 (60.56%), Query Frame = 3 Query: 117 SLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542 SL ++EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + I++VVD+ D D + +R EL +L++ L LLVL NK D P A++ ++ E+MGL SI +R Sbjct: 11 SLLGRREMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRYYFQNTQGIIFVVDSNDRDRINEAREELQSMLNEDELKDAVLLVLANKQDLPNAMNAAEITEKMGLHSIMNR 151
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF2_ORYSJ (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica GN=ARF PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 6.617e-23 Identity = 56/175 (32.00%), Postives = 94/175 (53.71%), Query Frame = 3 Query: 81 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 MGL F LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R ELH +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 1 MGL--TFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3) HSP 1 Score: 107.842 bits (268), Expect = 6.617e-23 Identity = 56/175 (32.00%), Postives = 94/175 (53.71%), Query Frame = 3 Query: 81 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 MGL F LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R ELH +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 1 MGL--TFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1B_DICDI (GTP-binding protein Sar1B OS=Dictyostelium discoideum GN=sarB PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.129e-22 Identity = 57/156 (36.54%), Postives = 97/156 (62.18%), Query Frame = 3 Query: 123 FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCR-AVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNI 587 FFK+E ++ +IGL NAGKT+L++++ TG IPT+ N T GNV K +DLGGQ R +W++Y + + IV++VD++DY+++ S+SE+HD+L L+ PLL+LG+K D ++E+L++ + ++ + + NS N+ Sbjct: 16 FFKKEAKIVIIGLGNAGKTTLLHLLVTGSLKSH-IPTLRPNAESFTYGNVNFKAYDLGGQQNLRFLWKQYVPDSKTIIVFMVDSSDYNSIIESKSEIHDILGDEHLSQSPLLILGSKCDAKGHHNRENLIDLLDIRR--------FELGLNNSNNV 162
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_YEAST (ADP-ribosylation factor 1 OS=Saccharomyces cerevisiae GN=ARF1 PE=1 SV=3) HSP 1 Score: 107.071 bits (266), Expect = 1.129e-22 Identity = 56/154 (36.36%), Postives = 90/154 (58.44%), Query Frame = 3 Query: 81 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542 MGL+ + L +LF +EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ R RS+W Y R +++VVD+ D + +R + +L++ L LV NK D PEA+S ++ E++GL SI +R Sbjct: 1 MGLFASKL--FSNLFGNKEMRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIGFNVETVQYKNISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLPEAMSAAEITEKLGLHSIRNR 151
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_LOCMI (ADP-ribosylation factor 1 OS=Locusta migratoria GN=ARF1 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.129e-22 Identity = 52/169 (30.77%), Postives = 93/169 (55.03%), Query Frame = 3 Query: 99 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 F N + LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LL+ NK D P A++ ++ +++GL S+ +R + + +DW Sbjct: 5 FANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDW 172
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_DROME (ADP-ribosylation factor 1 OS=Drosophila melanogaster GN=Arf79F PE=1 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 1.129e-22 Identity = 52/169 (30.77%), Postives = 93/169 (55.03%), Query Frame = 3 Query: 99 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 F N + LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LL+ NK D P A++ ++ +++GL S+ +R + + +DW Sbjct: 5 FANLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLAEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDW 172 The following BLAST results are available for this feature:
BLAST of CX671429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671429 ID=CX671429; Name=CX671429; organism=Citrus sinensis; type=EST; length=774bpback to top |