CX671429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF2_SCHPO (Probable ADP-ribosylation factor OS=Schizosaccharomyces pombe GN=SPBC1539.08 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.284e-22 Identity = 55/152 (36.18%), Postives = 85/152 (55.92%), Query Frame = 3 Query: 87 LWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542 L++ F LF +EM + ++GL AGKT+++ + S IPTVGFN+ VT N+ +WD+GGQ + R +W Y +++VVD+AD + + +R ELH ++S + LLVL NK D P ALS + + + L + DR Sbjct: 5 LFKGFSKPFSRLFSNKEMRILMLGLDAAGKTTILYKLKLN-QSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDR 155
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3) HSP 1 Score: 105.145 bits (261), Expect = 4.289e-22 Identity = 56/175 (32.00%), Postives = 93/175 (53.14%), Query Frame = 3 Query: 81 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 MGL +F LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V ++ +WD+GGQ + R +W Y + +++VVD+ D D + +R ELH +L++ L LLV NK D P A++ ++ ++ GL S+ R + + +DW Sbjct: 1 MGL--SFTKLFSRLFAKKEMRILMVGLDAAGKTTILYQLKLGEIVTT-IPTIGFNVETVEYQYISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKHGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1_NEUCR (Small COPII coat GTPase sar-1 OS=Neurospora crassa GN=sar-1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.602e-22 Identity = 57/155 (36.77%), Postives = 96/155 (61.94%), Query Frame = 3 Query: 81 MGLWEAFLNWLRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542 M LW F + L +L + +L +GL NAGKT+L++++ + + PT+ +++ GNV +DLGG + R +W+ Y V+ IV++VDA D++ LP +++E+ LLS L +P +VLGNKID PEA+S+++L +++GL T + Sbjct: 1 MWLWSWFYDILSNLGLLNKHGKLLFLGLDNAGKTTLLHMLKNDRVAI-LQPTLHPTSEELSVGNVKFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHERLPEAKAEIDALLSMEELAKVPFVVLGNKIDHPEAVSEDELRQRLGLWQTTGK 154
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF_NEUCR (ADP-ribosylation factor OS=Neurospora crassa GN=NCU08340 PE=3 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 7.316e-22 Identity = 53/162 (32.72%), Postives = 87/162 (53.70%), Query Frame = 3 Query: 120 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N+ +WD+GGQ + R +W Y + I++VVD+ D D + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + +DW Sbjct: 15 LFGKKEMRILMVGLDAAGKTTILYKLKLGEVVTT-IPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLSSLRQRSWYIQATCATTGDGLFEGLDW 175
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_SOLTU (ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.316e-22 Identity = 52/162 (32.10%), Postives = 89/162 (54.94%), Query Frame = 3 Query: 120 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D D + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 12 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF12_CAEEL (ADP-ribosylation factor 1-like 2 OS=Caenorhabditis elegans GN=arf-1.2 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.316e-22 Identity = 52/169 (30.77%), Postives = 94/169 (55.62%), Query Frame = 3 Query: 99 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 F + + LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P+A++ ++ +++GL S+ +R + + +DW Sbjct: 5 FGSLFKGLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYIQATCATSGDGLYEGLDW 172
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF12_CAEBR (ADP-ribosylation factor 1-like 2 OS=Caenorhabditis briggsae GN=arf-1.2 PE=3 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 7.316e-22 Identity = 52/169 (30.77%), Postives = 94/169 (55.62%), Query Frame = 3 Query: 99 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 F + + LF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P+A++ ++ +++GL S+ +R + + +DW Sbjct: 5 FGSLFKGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYIQATCATSGDGLYEGLDW 172
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.555e-22 Identity = 53/147 (36.05%), Postives = 93/147 (63.27%), Query Frame = 3 Query: 87 LWEAFLNWLRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 524 ++ F + L+ L +K+ +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD++ L S+ EL L++ ++ +P+L+LGNKID+PEA+S+E L E GL Sbjct: 8 IYSGFSSVLQFLGLYKKSGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF2_RAT (ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.555e-22 Identity = 53/169 (31.36%), Postives = 92/169 (54.44%), Query Frame = 3 Query: 99 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 F +SLF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 5 FEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDW 172
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF2_MOUSE (ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 9.555e-22 Identity = 53/169 (31.36%), Postives = 92/169 (54.44%), Query Frame = 3 Query: 99 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 F +SLF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 5 FEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDW 172 The following BLAST results are available for this feature:
BLAST of CX671429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671429 ID=CX671429; Name=CX671429; organism=Citrus sinensis; type=EST; length=774bpback to top |