CX671429
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF2_BOVIN (ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.555e-22 Identity = 53/169 (31.36%), Postives = 92/169 (54.44%), Query Frame = 3 Query: 99 FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 F +SLF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 5 FEKLFKSLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDW 172
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1_MAGGR (Small COPII coat GTPase SAR1 OS=Magnaporthe grisea GN=SAR1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.248e-21 Identity = 58/152 (38.16%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 102 LNW----LRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542 +NW L SL + +L +GL NAGKT+L++++ + + PT+ ++ GNV +DLGG + R +W+ Y V+ IV++VDA D+D P +++EL LLS L +P ++LGNKID PEA+S+E+L Q+GL T + Sbjct: 4 INWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAI-LQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALLSMEELAKVPFVILGNKIDHPEAISEEELRHQLGLYQTTGK 154
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1B_HUMAN (GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.248e-21 Identity = 53/147 (36.05%), Postives = 93/147 (63.27%), Query Frame = 3 Query: 87 LWEAFLNWLRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 524 ++ F + L+ L +K+ +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD++ L S+ EL L++ ++ +P+L+LGNKID+PEA+S+E L E GL Sbjct: 8 IYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL11_MOUSE (ADP-ribosylation factor-like protein 11 OS=Mus musculus GN=Arl11 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.248e-21 Identity = 53/152 (34.87%), Postives = 93/152 (61.18%), Query Frame = 3 Query: 129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKV-TKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNST 581 K E ++ ++GL +AGKT+++ + G D +PTVGFN+ + G+V++ LWD+GGQ + R+ W+ Y + +VYV+D+ D LP + +EL ++L P++ G+P LVL NK + P AL ++ ++GL+ ++ C + +C T Sbjct: 10 KAEAQVVMMGLDSAGKTTILYKLK-GNQLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELKEVLEDPNMAGVPFLVLANKQEAPGALPLLEIRNRLGLEGF--QKHCWELRACSALT 158
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF1_SCHPO (ADP-ribosylation factor 1 OS=Schizosaccharomyces pombe GN=arf1 PE=2 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 1.248e-21 Identity = 50/144 (34.72%), Postives = 86/144 (59.72%), Query Frame = 3 Query: 114 RSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDRE 545 +SLF K+EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + I++VVD+ D + + + EL +L++ L LLV NK D P A++ ++ +++GL S+ R+ Sbjct: 10 QSLFGKREMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERISEAHEELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRHRQ 152
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.630e-21 Identity = 53/147 (36.05%), Postives = 93/147 (63.27%), Query Frame = 3 Query: 87 LWEAFLNWLRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 524 ++ F + L+ L +K+ +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD++ L S+ EL L++ ++ +P+L+LGNKID+PEA+S+E L E GL Sbjct: 8 IYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.630e-21 Identity = 53/147 (36.05%), Postives = 93/147 (63.27%), Query Frame = 3 Query: 87 LWEAFLNWLRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 524 ++ F + L+ L +K+ +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD++ L S+ EL L++ ++ +P+L+LGNKID+PEA+S+E L E GL Sbjct: 8 IYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1B_CRIGR (GTP-binding protein SAR1b OS=Cricetulus griseus GN=SAR1B PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.630e-21 Identity = 53/147 (36.05%), Postives = 93/147 (63.27%), Query Frame = 3 Query: 87 LWEAFLNWLRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 524 ++ F + L+ L +K+ +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD++ L S+ EL L++ ++ +P+L+LGNKID+PEA+S+E L E GL Sbjct: 8 IYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.630e-21 Identity = 53/147 (36.05%), Postives = 93/147 (63.27%), Query Frame = 3 Query: 87 LWEAFLNWLRSL-FFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 524 ++ F + L+ L +K+ +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD++ L S+ EL L++ ++ +P+L+LGNKID+PEA+S+E L E GL Sbjct: 8 IYSGFSSVLQFLGLYKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL2_DROME (ADP-ribosylation factor-like protein 2 OS=Drosophila melanogaster GN=Arf84F PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.630e-21 Identity = 61/170 (35.88%), Postives = 91/170 (53.53%), Query Frame = 3 Query: 99 FLNWLRSLFFKQ-EMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605 FL L+ + K+ EM + L+GL NAGKT+++ G + + PT+GFN++ + T+ +WD+GGQ RS W Y + +V+VVD+AD L EL LL + L G LLVL NK D P ALS ++ E + L+ IT +S + + +DW Sbjct: 3 FLTVLKKMRQKEREMRILLLGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEILHLEDITTHHWLVAGVSAVTGEKLLSSMDW 171 The following BLAST results are available for this feature:
BLAST of CX671429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671429 ID=CX671429; Name=CX671429; organism=Citrus sinensis; type=EST; length=774bpback to top |