CX671429

Overview
NameCX671429
Unique NameCX671429
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF_DUGJA (ADP-ribosylation factor OS=Dugesia japonica PE=2 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.630e-21
Identity = 52/165 (31.52%), Postives = 91/165 (55.15%), Query Frame = 3
Query:  111 LRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            L  LF K+EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    +++VVD+ D + +  +R EL  +L++  L    LLV  NK D P A++  ++ +++GL S+ +R          +   +   +DW
Sbjct:    9 LDRLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLNEDELRDAVLLVFANKQDLPNAMNPAEITDKLGLHSLRNRSWYIQATCATSGDGLYEGLDW 172          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL11_BOVIN (ADP-ribosylation factor-like protein 11 OS=Bos taurus GN=ARL11 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.129e-21
Identity = 52/140 (37.14%), Postives = 91/140 (65.00%), Query Frame = 3
Query:  129 KQEMELSLIGLQNAGKTSLVNVIATGGYS-EDMIPTVGFNMRKVTK-GNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 542
            + E ++ ++GL +AGKT+L+  +   GY   + +PTVGFN+  + + G+V++ LWD+GGQ + R+ W+ +      +VYV+D+ D   LP + +EL ++L  PS+  +PLLVL NK + P+ALS  ++ +++GL+    R
Sbjct:   10 RAEAQVVMMGLDSAGKTTLLYRLK--GYQLVETLPTVGFNVEPLEEPGHVSLTLWDVGGQSQLRASWKDHLEGTDILVYVLDSTDEARLPEAVAELREVLDDPSVASVPLLVLANKQEVPQALSLPEIRDRLGLQGFLGR 147          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: AR13B_HUMAN (ADP-ribosylation factor-like protein 13B OS=Homo sapiens GN=ARL13B PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.129e-21
Identity = 52/158 (32.91%), Postives = 91/158 (57.59%), Query Frame = 3
Query:  132 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVC-CYMISCKNSTNIDTVID 602
            +++ L ++GL NAGKT+    I  G Y ED+ PTVGF+   + +G   + ++DLGG  R R +W+ Y      +++VVD++D + +  ++  + ++L  P ++G P+LVL NK DK  AL + D++E + L+ + +   C C +  C   +     ID
Sbjct:   20 RKVTLLMVGLDNAGKTATAKGIQ-GEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKID 176          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF11_CAEEL (ADP-ribosylation factor 1-like 1 OS=Caenorhabditis elegans GN=arf-1.1 PE=3 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.780e-21
Identity = 56/156 (35.90%), Postives = 92/156 (58.97%), Query Frame = 3
Query:   81 MGLWEAFLNWLRSLFFKQ-EMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDRE 545
            MGL   F + + S  F   E    ++GL  AGKT+++  +     + + IPT+GFN+  VT   +T+ +WD+GGQ + R++W+ Y    + +V+VVD++D + +P ++ EL  LL++P L    LLV  NK D P A S  +L + + L S+ +RE
Sbjct:    1 MGL---FFSKISSFMFPNIECRTLMLGLDGAGKTTILYKLKLNE-TVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDLGSLKNRE 152          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL2_BOVIN (ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.631e-21
Identity = 54/159 (33.96%), Postives = 84/159 (52.83%), Query Frame = 3
Query:  129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            ++E+ L ++GL NAGKT+++     G   + + PT+GFN++ +      + +WD+GGQ   RS W  Y  +   +++VVD+AD   +   + EL +LL +  L G  LL+  NK D P ALS   + E + L SI     C    S     N+   IDW
Sbjct:   14 ERELRLLMLGLDNAGKTTILKKF-NGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQNLLVEERLAGATLLIFANKQDLPGALSSNAIREALELDSIRSHHWCIQGCSAVTGENLLPGIDW 171          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARFJ_DICDI (ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.631e-21
Identity = 55/171 (32.16%), Postives = 95/171 (55.56%), Query Frame = 3
Query:   96 AFLNWLRSLFF-KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            +F + + SLF  K+E  + +IGL  AGK++L+  +  G      IPT+GFN+  +   N+++ +WD+GGQ + R +W+ Y    +A+++VVD+ D + +   + E+ +LL +  L G  +LV  NK D   A++  +++  + L SI DR+      S   S  I    DW
Sbjct:   11 SFFSNIFSLFEGKKETRILMIGLDGAGKSTLLYKLKLGDVVST-IPTIGFNVETIEYKNLSMTVWDVGGQHKIRPLWKHYYHGSNAVIFVVDSTDRERMDEVKEEIDNLLIQDELKGTQILVFANKQDMNNAMNTAEIVNSLDLNSIKDRKWYVQPCSAIRSDGIYEGFDW 180          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARFH_DICDI (ADP-ribosylation factor H OS=Dictyostelium discoideum GN=arrH PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.742e-21
Identity = 55/174 (31.61%), Postives = 100/174 (57.47%), Query Frame = 3
Query:   96 AFLNWLRSLFF-KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISC---KNSTNIDTVIDW 605
            +F + + SLF  K++  + +IGL  AGK++L+  +  G      +PT+GFN+  +   N+++ +WD+GGQ + R++W+ Y    +AI++VVD+ D + +   + E+  LL +  L GI +L+  NK D   A++  ++++ + L SI DR+   Y+  C   K+   I    DW
Sbjct:   11 SFFSNIFSLFEGKKQTRILMIGLDGAGKSTLLYKLKLGDIVST-VPTIGFNVETIEYKNLSMTVWDVGGQYKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDTLLIQEELKGIQILIFANKQDMNNAMNTSEIVDSLNLNSIKDRK--WYVQPCSAIKSPHGIYEGFDW 181          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL2_HUMAN (ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1 SV=4)

HSP 1 Score: 101.293 bits (251), Expect = 6.194e-21
Identity = 54/159 (33.96%), Postives = 83/159 (52.20%), Query Frame = 3
Query:  129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            ++E+ L ++GL NAGKT+++     G   + + PT+GFN++ +      + +WD+GGQ   RS W  Y  +   +++VVD+AD   +   + EL  LL +  L G  LL+  NK D P ALS   + E + L SI     C    S     N+   IDW
Sbjct:   14 ERELRLLMLGLDNAGKTTILKKF-NGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDW 171          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.089e-21
Identity = 54/152 (35.53%), Postives = 89/152 (58.55%), Query Frame = 3
Query:  129 KQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKV-TKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNST 581
            K E ++ ++GL +AGKT+L+  +  G    + +PTVGFN+  +   G+V++ LWD+GGQ   R+ W+ Y      +VYV+D+ D   LP S +EL ++L+ P++ G+P LVL NK + P+AL    +  ++ L+   D   C  +  C   T
Sbjct:   10 KAEAQVVMMGLDSAGKTTLLYKLK-GHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLERFQDH--CWELRGCSALT 158          
BLAST of CX671429 vs. ExPASy Swiss-Prot
Match: ARF5_CHICK (ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5 PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 8.089e-21
Identity = 50/162 (30.86%), Postives = 86/162 (53.09%), Query Frame = 3
Query:  120 LFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 605
            +F K++M + ++GL  AGKT+++  +  G      IPT+GFN+  V   N+   +WD+GGQ + R +W  Y +    +++VVD+ D + +  S  EL  +L +  L    LLV  NK D P A+   +L +++GL+++  R            T +   +DW
Sbjct:   12 IFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESAEELQKMLQEDELRDAVLLVFANKQDMPNAMVVSELTDKLGLQALRSRTWYVQATCATQGTGLYDGLDW 172          
The following BLAST results are available for this feature:
BLAST of CX671429 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 216
Match NameE-valueIdentityDescription
ARF_DUGJA1.630e-2131.52ADP-ribosylation factor OS=Dugesia japonica PE=2 S... [more]
ARL11_BOVIN2.129e-2137.14ADP-ribosylation factor-like protein 11 OS=Bos tau... [more]
AR13B_HUMAN2.129e-2132.91ADP-ribosylation factor-like protein 13B OS=Homo s... [more]
ARF11_CAEEL2.780e-2135.90ADP-ribosylation factor 1-like 1 OS=Caenorhabditis... [more]
ARL2_BOVIN3.631e-2133.96ADP-ribosylation factor-like protein 2 OS=Bos taur... [more]
ARFJ_DICDI3.631e-2132.16ADP-ribosylation factor J OS=Dictyostelium discoid... [more]
ARFH_DICDI4.742e-2131.61ADP-ribosylation factor H OS=Dictyostelium discoid... [more]
ARL2_HUMAN6.194e-2133.96ADP-ribosylation factor-like protein 2 OS=Homo sap... [more]
ARL11_HUMAN8.089e-2135.53ADP-ribosylation factor-like protein 11 OS=Homo sa... [more]
ARF5_CHICK8.089e-2130.86ADP-ribosylation factor 5 OS=Gallus gallus GN=ARF5... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A05_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A05-B9-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671429 ID=CX671429; Name=CX671429; organism=Citrus sinensis; type=EST; length=774bp
GCAAGAAAAGTTTTTTCGCTTTTTCCCAGCTTTTATACTTCAAAGGCGAA
ACCCTAGCTTCTTATTTTGTCGAATAAAAGATGGGATTATGGGAAGCTTT
TCTCAACTGGCTTCGAAGTCTCTTCTTTAAACAAGAAATGGAGCTATCTT
TGATAGGGCTTCAGAATGCAGGCAAGACATCCCTTGTGAATGTTATCGCA
ACTGGTGGATATAGTGAAGATATGATCCCAACAGTAGGATTTAATATGAG
GAAAGTGACTAAGGGGAATGTCACAATAAAGCTGTGGGATCTTGGAGGCC
AACCACGGTTTCGCAGTATGTGGGAGAGATACTGTCGTGCAGTTTCAGCT
ATTGTTTACGTTGTTGATGCTGCTGATTATGATAACTTGCCTGTGTCAAG
AAGTGAACTCCATGACTTGTTAAGTAAACCCTCGCTGAATGGTATCCCAT
TGCTGGTACTGGGAAACAAGATTGATAAACCAGAAGCCTTGTCTAAAGAG
GATCTGATGGAACAAATGGGGCTGAAGTCCATTACCGATAGAGAAGTTTG
TTGCTACATGATTTCATGCAAAAACTCTACCAACATTGACACGGTTATTG
ATTGGCTTGTAAAGCATTCAAAATCAAAGAGTTGAGTTTCTTCCTCTAGT
TTTGAACTACATGGGAGCCTGTTTTCAACAACTGATTCAGGATGAGTTGA
GTGAGCTGTACTGTTAGTCTGCTCGGGTCAGTCGATGTGTGACCATAGTT
TTTTATTTCGACTTGGCTTTTTAT
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