CX671428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1A_HUMAN (GTP-binding protein SAR1a OS=Homo sapiens GN=SAR1A PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19 Identity = 47/128 (36.72%), Postives = 83/128 (64.84%), Query Frame = -1 Query: 432 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 815 +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD+ L S+ EL+ L++ +++ +P+L+LGNKID+ +A+S+E L E GL Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHSRLVESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGL 153
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL6_MOUSE (ADP-ribosylation factor-like protein 6 OS=Mus musculus GN=Arl6 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19 Identity = 46/161 (28.57%), Postives = 95/161 (59.01%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIA-TGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSL--NGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +E+ + +GL N+GKT+++N + + S+D++PT+GF++ K +++ ++D+ GQ R+R++WE Y + AI++V+D++D + V++ EL LL+ P + IP+L NK+D ++++ + + + L+SI D+ + +DW Sbjct: 16 KEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDSVTSVKVSQLLCLESIKDKPWHICASDAIKGEGLQEGVDW 176
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL3_PIG (ADP-ribosylation factor-like protein 3 OS=Sus scrofa GN=ARL3 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19 Identity = 50/158 (31.65%), Postives = 82/158 (51.90%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 QE+ + L+GL NAGKT+L+ +A+ S + PT GFN++ V + +WD+GGQ + R W Y ++YV+D+AD + EL +LL + L+ +P+L+ NK D A ++ E + L +I DR S + ++W Sbjct: 16 QEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF5_RAT (ADP-ribosylation factor 5 OS=Rattus norvegicus GN=Arf5 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19 Identity = 48/158 (30.38%), Postives = 82/158 (51.90%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 ++M + ++GL AGKT+++ + G IPT+GFN+ V N+ +WD+GGQ + R +W Y + +++VVD+ D + + S EL +L + L LLV NK D P A+ +L +++GL+ + R T + +DW Sbjct: 16 KQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF5_MOUSE (ADP-ribosylation factor 5 OS=Mus musculus GN=Arf5 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19 Identity = 48/158 (30.38%), Postives = 82/158 (51.90%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 ++M + ++GL AGKT+++ + G IPT+GFN+ V N+ +WD+GGQ + R +W Y + +++VVD+ D + + S EL +L + L LLV NK D P A+ +L +++GL+ + R T + +DW Sbjct: 16 KQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF5_HUMAN (ADP-ribosylation factor 5 OS=Homo sapiens GN=ARF5 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19 Identity = 48/158 (30.38%), Postives = 82/158 (51.90%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 ++M + ++GL AGKT+++ + G IPT+GFN+ V N+ +WD+GGQ + R +W Y + +++VVD+ D + + S EL +L + L LLV NK D P A+ +L +++GL+ + R T + +DW Sbjct: 16 KQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVQESADELQKMLQEDELRDAVLLVFANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF2_RAT (ADP-ribosylation factor 2 OS=Rattus norvegicus GN=Arf2 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19 Identity = 48/158 (30.38%), Postives = 86/158 (54.43%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF2_MOUSE (ADP-ribosylation factor 2 OS=Mus musculus GN=Arf2 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19 Identity = 48/158 (30.38%), Postives = 86/158 (54.43%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF2_BOVIN (ADP-ribosylation factor 2 OS=Bos taurus GN=ARF2 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.708e-19 Identity = 48/158 (30.38%), Postives = 86/158 (54.43%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVNEAREELTRMLAEDELRDAVLLVFVNKQDLPNAMNAAEITDKLGLHSLRQRNWYIQATCATSGDGLYEGLDW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1A_PIG (GTP-binding protein SAR1a OS=Sus scrofa GN=SAR1A PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.231e-19 Identity = 47/128 (36.72%), Postives = 83/128 (64.84%), Query Frame = -1 Query: 432 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 815 +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD+ L S+ EL+ L++ +++ +P+L+LGNKID+ +A+S+E L E GL Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHEQARRVWKNYLPAINGIVFLVDCADHPRLMESKVELNALMTDETISNVPILILGNKIDRTDAISEEKLREIFGL 153 The following BLAST results are available for this feature:
BLAST of CX671428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671428 ID=CX671428; Name=CX671428; organism=Citrus sinensis; type=EST; length=824bpback to top |