CX671428

Overview
NameCX671428
Unique NameCX671428
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL4D_PONAB (ADP-ribosylation factor-like protein 4D OS=Pongo abelii GN=ARL4D PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.970e-19
Identity = 48/139 (34.53%), Postives = 82/139 (58.99%), Query Frame = -1
Query:  423 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVT-----KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSI 824
            Q + + +IGL +AGKTSL+  +    + +  +PT GFN  K+         +T ++WD+GGQ + R +W  Y R    +V+VVDAA+ + L  ++ ELH +       G+P+LVL NK D+P ALS  ++ +++ ++ +
Sbjct:   20 QALHVVVIGLDSAGKTSLLYRLKFKEFVQS-VPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVREL 157          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL4D_HUMAN (ADP-ribosylation factor-like protein 4D OS=Homo sapiens GN=ARL4D PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 4.970e-19
Identity = 48/139 (34.53%), Postives = 82/139 (58.99%), Query Frame = -1
Query:  423 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVT-----KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSI 824
            Q + + +IGL +AGKTSL+  +    + +  +PT GFN  K+         +T ++WD+GGQ + R +W  Y R    +V+VVDAA+ + L  ++ ELH +       G+P+LVL NK D+P ALS  ++ +++ ++ +
Sbjct:   20 QALHVVVIGLDSAGKTSLLYRLKFKEFVQS-VPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDAAEAERLEEAKVELHRISRASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVREL 157          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF4_ARATH (Probable ADP-ribosylation factor At2g15310 OS=Arabidopsis thaliana GN=At2g15310 PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 4.970e-19
Identity = 45/143 (31.47%), Postives = 83/143 (58.04%), Query Frame = -1
Query:  393 EMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMI 821
            ++ + ++GL  +GKT+++  +  G      +PT+GFN+  V    +   +WD+GGQ + R +W  Y +    +++VVD++D + L  +R+ELH +L+   L G  +LV  NK D   AL   ++  ++GL S++ R   C++I
Sbjct:   17 KVRILMVGLDGSGKTTILYKLKLGEVVTT-VPTIGFNLETVEYKGINFTVWDIGGQEKIRKLWRHYFQNAQGLIFVVDSSDSERLSEARNELHRILTDNELEGACVLVFANKQDSRNALPVAEVANKLGLHSLSKR---CWLI 155          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF1_PLAFA (ADP-ribosylation factor 1 OS=Plasmodium falciparum GN=ARF1 PE=2 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 4.970e-19
Identity = 44/137 (32.12%), Postives = 81/137 (59.12%), Query Frame = -1
Query:  414 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 824
            +++ + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y      +++VVD+ D + +  +R ELH ++++  L    +LV  NK D P A+S  ++ E++ L +I +R
Sbjct:   16 KDVRILMVGLDAAGKTTILYKVKLGEVVTT-IPTIGFNVETVEFRNISFTVWDVGGQDKIRPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELKDAIILVFANKQDLPNAMSAAEVTEKLHLNTIRER 151          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL6_PONAB (ADP-ribosylation factor-like protein 6 OS=Pongo abelii GN=ARL6 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.491e-19
Identity = 45/161 (27.95%), Postives = 95/161 (59.01%), Query Frame = -1
Query:  351 QEMELSLIGLQNAGKTSLVNVIA-TGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSL--NGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            +E+ +  +GL N+GKT+++N +  +   S++++PT+GF++ K    +++  ++D+ GQ R+R++WE Y +   AI++V+D++D   + V++ EL  LL+ P +    IP+L   NK+D  +A++   + + + L++I D+              +   +DW
Sbjct:   16 KEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDW 176          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL6_HUMAN (ADP-ribosylation factor-like protein 6 OS=Homo sapiens GN=ARL6 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.491e-19
Identity = 45/161 (27.95%), Postives = 95/161 (59.01%), Query Frame = -1
Query:  351 QEMELSLIGLQNAGKTSLVNVIA-TGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSL--NGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            +E+ +  +GL N+GKT+++N +  +   S++++PT+GF++ K    +++  ++D+ GQ R+R++WE Y +   AI++V+D++D   + V++ EL  LL+ P +    IP+L   NK+D  +A++   + + + L++I D+              +   +DW
Sbjct:   16 KEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANKMDLRDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDW 176          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL4D_MOUSE (ADP-ribosylation factor-like protein 4D OS=Mus musculus GN=Arl4d PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.491e-19
Identity = 47/139 (33.81%), Postives = 82/139 (58.99%), Query Frame = -1
Query:  423 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVT-----KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSI 824
            Q + + +IGL +AGKTSL+  +    + +  +PT GFN  K+         +T ++WD+GGQ + R +W  Y R    +V+VVD+A+ + L  ++ ELH +       G+P+LVL NK D+P ALS  ++ +++ ++ +
Sbjct:   20 QALHVVVIGLDSAGKTSLLYRLKFKEFVQS-VPTKGFNTEKIRVPLGGSRGITFQVWDVGGQEKLRPLWRSYTRRTDGLVFVVDSAEIERLEEAKVELHRISKASDNQGVPVLVLANKQDQPGALSAAEVEKRLAVREL 157          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF4_PONAB (ADP-ribosylation factor 4 OS=Pongo abelii GN=ARF4 PE=2 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 6.491e-19
Identity = 47/158 (29.75%), Postives = 84/158 (53.16%), Query Frame = -1
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            ++M + ++GL  AGKT+++  +  G      IPT+GFN+  V   N+   +WD+GGQ R R +W+ Y +    +++VVD+ D + +     EL  +L    L    LL+  NK D P A++  ++ +++GL+S+ +R            T +   +DW
Sbjct:   16 KQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDW 172          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF4_HUMAN (ADP-ribosylation factor 4 OS=Homo sapiens GN=ARF4 PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 6.491e-19
Identity = 47/158 (29.75%), Postives = 84/158 (53.16%), Query Frame = -1
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            ++M + ++GL  AGKT+++  +  G      IPT+GFN+  V   N+   +WD+GGQ R R +W+ Y +    +++VVD+ D + +     EL  +L    L    LL+  NK D P A++  ++ +++GL+S+ +R            T +   +DW
Sbjct:   16 KQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNICFTVWDVGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVADELQKMLLVDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDW 172          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL2_CAEBR (ADP-ribosylation factor-like protein 2 OS=Caenorhabditis briggsae GN=evl-20.1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 8.478e-19
Identity = 49/134 (36.57%), Postives = 80/134 (59.70%), Query Frame = -1
Query:  423 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSI 824
            +EM + ++GL NAGKT+L+        ++ + PT+GF+++ V   +  + LWD+GGQ   RS W+ Y  +  A+++VVD++D + L     EL  LL +  L+G  LLVL NK D P A+    + + + L+SI
Sbjct:   15 REMRILILGLDNAGKTTLMKKFLDEP-TDTIEPTLGFDIKTVHFKDFQLNLWDVGGQKSLRSYWKNYFESTDALIWVVDSSDRERLTQCSEELKKLLQEERLSGASLLVLANKSDLPGAIDVNSIAQVLELQSI 147          
The following BLAST results are available for this feature:
BLAST of CX671428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 213
Match NameE-valueIdentityDescription
ARL4D_PONAB4.970e-1934.53ADP-ribosylation factor-like protein 4D OS=Pongo a... [more]
ARL4D_HUMAN4.970e-1934.53ADP-ribosylation factor-like protein 4D OS=Homo sa... [more]
ARF4_ARATH4.970e-1931.47Probable ADP-ribosylation factor At2g15310 OS=Arab... [more]
ARF1_PLAFA4.970e-1932.12ADP-ribosylation factor 1 OS=Plasmodium falciparum... [more]
ARL6_PONAB6.491e-1927.95ADP-ribosylation factor-like protein 6 OS=Pongo ab... [more]
ARL6_HUMAN6.491e-1927.95ADP-ribosylation factor-like protein 6 OS=Homo sap... [more]
ARL4D_MOUSE6.491e-1933.81ADP-ribosylation factor-like protein 4D OS=Mus mus... [more]
ARF4_PONAB6.491e-1929.75ADP-ribosylation factor 4 OS=Pongo abelii GN=ARF4 ... [more]
ARF4_HUMAN6.491e-1929.75ADP-ribosylation factor 4 OS=Homo sapiens GN=ARF4 ... [more]
ARL2_CAEBR8.478e-1936.57ADP-ribosylation factor-like protein 2 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A05-B9-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671428 ID=CX671428; Name=CX671428; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTAAGCTTTCAAACCACTATTTTATTAAAAAAGCACAGCAAATAC
AGTACATGTTTACAACACAAGGCACACCAATATAGATCTATACATGAAAG
TATGATCACTTGGTATCTCAGCAATTAATACATGGGTGTTCCCAGATTCC
TGATGTAAAACTAAACAAATTATGATTTACGATAAAAAGCCAAGTCGAAA
TAAAAAACTATGGTCACACATCGACTGACCCGAGCAGACTAACAGTACAG
CTCACTCAACTCATCCTGAATCAGTTGTTGAAAACAGGCTCCCATGTAGT
TCAAAACTAGAGGAAGAAACTCAACTCTTTGATTTTGAATGCTTTACAAG
CCAATCAATAACCGTGTCAATGTTGGTAGAGTTTTTGCATGAAATCATGT
AGCAACAAACTTCTCTATCGGTAATGGACTTCAGCCCCATTTGTTCCATC
AGATCCTCTTTAGACAAGGCTTCTGGTTTATCAATCTTGTTTCCCAGTAC
CAGCAATGGGATACCATTCAGCGAGGGTTTACTTAACAAGTCATGGAGTT
CACTTCTTGACACAGGCAAGTTATCATAATCAGCAGCATCAACAACGTAA
ACAATAGCTGAAACTGCACGACAGTATCTCTCCCACATACTGCGAAACCG
TGGTTGGCCTCCAAGATCCCACAGCTTTATTGTGACATTCCCCTTAGTCA
CTTTCCTCATATTAAATCCTACTGTTGGGATCATATCTTCACTATATCCA
CCAGTTGCGATAACATTCACAAGGGATGTCTTGCCTGCATTCTGAAGCCC
TATCAAAGATAGCTCCATTTCTTG
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