CX671428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARD1_CAEEL (Putative GTP-binding protein ard-1 homolog OS=Caenorhabditis elegans GN=arc-1 PE=2 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 5.322e-13 Identity = 47/159 (29.56%), Postives = 73/159 (45.91%), Query Frame = -1 Query: 354 EMELSLIGLQNAGKTSLVNVIATGGYSEDMIP--TVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKED-LMEQMGLKSITDREVCCYMISCKNSTNIDTVID 821 E + L+GL AGKTS+V + M P T+GFN+ + N + WD+GG P+ R +W+ Y AI YV+D + + EL+ ++S P + P++V N+ D D L+ Q+ CC + ID +ID Sbjct: 369 ESRVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHYKNYRLNFWDVGGLPKLRHLWKHYYSNAQAIFYVIDGYAVERFSEAIKELNRVMSDPLVGTCPVIVAVNRKDGYALNGHMDALLSQLEALPFQHHFHCC---DAATGSGIDQIID 524
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: CIN4_YEAST (GTP-binding protein CIN4 OS=Saccharomyces cerevisiae GN=CIN4 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.712e-11 Identity = 47/168 (27.98%), Postives = 87/168 (51.79%), Query Frame = -1 Query: 354 QEMELSLIGLQNAGKTSLVNVIATGGY--SEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGI----PLLVLGNKIDKPE---ALSKEDLMEQMGLKSITDREVCCYMISCKNST--NIDTVID 824 +E+ ++GL N+GK+++VN + ++ ++PTVGF + + +VTI LWD+GGQ R W+ Y A+++ +D + + EL +L+++ N I ++V+ NKID E L + L+ + LK + ++ ++ C T ID + D Sbjct: 15 KEIRCLILGLDNSGKSTIVNKLLPKDEQNNDGIMPTVGFQIHSLMIKDVTISLWDIGGQRTLRPFWDNYFDKTQAMIWCIDVSLSMRFDETLQELKELINRDE-NRIGYECAVIVVLNKIDLVEDKSELHRRCLLVESELKCLFKPDIRIELVKCSGVTGEGIDNLRD 181
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARLX_DICDI (ADP-ribosylation factor-like protein DDB_G0292332 OS=Dictyostelium discoideum GN=DDB_G0292332 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.236e-11 Identity = 45/168 (26.79%), Postives = 91/168 (54.17%), Query Frame = -1 Query: 351 ELSLIGLQNAGKTSLVNVIATGGYSEDM-----------IPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRA-VSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKID-KPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 815 ++ ++G++N GKT+L+ I YSE++ IPT GFN+ + V +WD+GG+ R + Y + + +I++V D++D ++L S+ E L ++ SL +P L++ NK D K + + +++++ KS + + ++S N+ ++ I+W Sbjct: 19 KVMILGVENVGKTTLLYNIYKF-YSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDLKQQTIEIDEILKTYFDKSSINETI---LMSQNNNDDLIKCINW 182 The following BLAST results are available for this feature:
BLAST of CX671428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671428 ID=CX671428; Name=CX671428; organism=Citrus sinensis; type=EST; length=824bpback to top |