CX671428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF_MAIZE (ADP-ribosylation factor OS=Zea mays GN=ARF1 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.825e-21 Identity = 50/158 (31.65%), Postives = 86/158 (54.43%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D D + +R ELH +L++ L LLV NK D P A++ ++ +++GL S+ R + +DW Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLNSLRQRHWYIQSTCATTGEGLYEGLDW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF2_ARATH (ADP-ribosylation factor 2 OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 1.825e-21 Identity = 50/158 (31.65%), Postives = 87/158 (55.06%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D D + +R ELH +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF1_SALBA (ADP-ribosylation factor 1 OS=Salix bakko GN=ARF1 PE=2 SV=3) HSP 1 Score: 103.219 bits (256), Expect = 1.825e-21 Identity = 50/158 (31.65%), Postives = 87/158 (55.06%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D D + +R ELH +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVGEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.825e-21 Identity = 50/158 (31.65%), Postives = 87/158 (55.06%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D D + +R ELH +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARFK_DICDI (ADP-ribosylation factor K OS=Dictyostelium discoideum GN=arrK PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.384e-21 Identity = 52/158 (32.91%), Postives = 90/158 (56.96%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 ++ + +IGL AGK++L+ + G IPT+GFN+ + N+++ +WD+GGQ + R++W+ Y +AI++VVD+ D + + + E+ +LL + L GI +LVL NK D A++ +++ + L SI DR+ S S I DW Sbjct: 24 KDTRILMIGLDGAGKSTLLFKLKLGDVVLT-IPTIGFNVETIVYKNLSMTVWDVGGQHKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDNLLIQDELKGIQILVLANKQDMNNAMNTAEIVNSLNLNSIKDRKWYVQPCSAIRSDGIYEGFDW 180
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF1_YEAST (ADP-ribosylation factor 1 OS=Saccharomyces cerevisiae GN=ARF1 PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 2.384e-21 Identity = 50/137 (36.50%), Postives = 81/137 (59.12%), Query Frame = -1 Query: 414 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 824 +EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ R RS+W Y R +++VVD+ D + +R + +L++ L LV NK D PEA+S ++ E++GL SI +R Sbjct: 16 KEMRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIGFNVETVQYKNISFTVWDVGGQDRIRSLWRHYYRNTEGVIFVVDSNDRSRIGEAREVMQRMLNEDELRNAAWLVFANKQDLPEAMSAAEITEKLGLHSIRNR 151
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: AR13B_HUMAN (ADP-ribosylation factor-like protein 13B OS=Homo sapiens GN=ARL13B PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.384e-21 Identity = 52/158 (32.91%), Postives = 91/158 (57.59%), Query Frame = -1 Query: 354 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVC-CYMISCKNSTNIDTVID 824 +++ L ++GL NAGKT+ I G Y ED+ PTVGF+ + +G + ++DLGG R R +W+ Y +++VVD++D + + ++ + ++L P ++G P+LVL NK DK AL + D++E + L+ + + C C + C + ID Sbjct: 20 RKVTLLMVGLDNAGKTATAKGIQ-GEYPEDVAPTVGFSKINLRQGKFEVTIFDLGGGIRIRGIWKNYYAESYGVIFVVDSSDEERMEETKEAMSEMLRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPCSAISGYGKKID 176
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1_MAGGR (Small COPII coat GTPase SAR1 OS=Magnaporthe grisea GN=SAR1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.113e-21 Identity = 53/134 (39.55%), Postives = 84/134 (62.69%), Query Frame = -1 Query: 414 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 815 +L +GL NAGKT+L++++ + + PT+ ++ GNV +DLGG + R +W+ Y V+ IV++VDA D+D P +++EL LLS L +P ++LGNKID PEA+S+E+L Q+GL T + Sbjct: 22 KLLFLGLDNAGKTTLLHMLKNDRVAI-LQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALLSMEELAKVPFVILGNKIDHPEAISEEELRHQLGLYQTTGK 154
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL11_BOVIN (ADP-ribosylation factor-like protein 11 OS=Bos taurus GN=ARL11 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.113e-21 Identity = 52/138 (37.68%), Postives = 90/138 (65.22%), Query Frame = -1 Query: 414 EMELSLIGLQNAGKTSLVNVIATGGYS-EDMIPTVGFNMRKVTK-GNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 821 E ++ ++GL +AGKT+L+ + GY + +PTVGFN+ + + G+V++ LWD+GGQ + R+ W+ + +VYV+D+ D LP + +EL ++L PS+ +PLLVL NK + P+ALS ++ +++GL+ R Sbjct: 12 EAQVVMMGLDSAGKTTLLYRLK--GYQLVETLPTVGFNVEPLEEPGHVSLTLWDVGGQSQLRASWKDHLEGTDILVYVLDSTDEARLPEAVAELREVLDDPSVASVPLLVLANKQEVPQALSLPEIRDRLGLQGFLGR 147
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF3_ARATH (ADP-ribosylation factor 3 OS=Arabidopsis thaliana GN=ARF3 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 3.113e-21 Identity = 52/158 (32.91%), Postives = 82/158 (51.90%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +E + ++GL NAGKT+++ + G IPT+GFN+ V N+ ++WDLGGQ R W Y A++YVVD++D D + V++ E H +L + L G +L+ NK D P AL + E + L I R+ + + +DW Sbjct: 16 KEARILVLGLDNAGKTTILYRLQMGEVVST-IPTIGFNVETVQYNNIKFQVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLIFANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDW 172 The following BLAST results are available for this feature:
BLAST of CX671428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671428 ID=CX671428; Name=CX671428; organism=Citrus sinensis; type=EST; length=824bpback to top |