CX671428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1B_MOUSE (GTP-binding protein SAR1b OS=Mus musculus GN=Sar1b PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.935e-21 Identity = 49/128 (38.28%), Postives = 83/128 (64.84%), Query Frame = -1 Query: 432 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 815 +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD++ L S+ EL L++ ++ +P+L+LGNKID+PEA+S+E L E GL Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1B_HUMAN (GTP-binding protein SAR1b OS=Homo sapiens GN=SAR1B PE=1 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.935e-21 Identity = 49/128 (38.28%), Postives = 83/128 (64.84%), Query Frame = -1 Query: 432 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 815 +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD++ L S+ EL L++ ++ +P+L+LGNKID+PEA+S+E L E GL Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF11_CAEEL (ADP-ribosylation factor 1-like 1 OS=Caenorhabditis elegans GN=arf-1.1 PE=3 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 6.935e-21 Identity = 50/137 (36.50%), Postives = 84/137 (61.31%), Query Frame = -1 Query: 411 EMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDRE 821 E ++GL AGKT+++ + + + IPT+GFN+ VT +T+ +WD+GGQ + R++W+ Y + +V+VVD++D + +P ++ EL LL++P L LLV NK D P A S +L + + L S+ +RE Sbjct: 17 ECRTLMLGLDGAGKTTILYKLKLNE-TVNTIPTIGFNVETVTFQKITLTVWDVGGQKKIRALWKYYFPNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELADSHLLVFANKQDMPNARSPAELTQLLDLGSLKNRE 152
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1B_RAT (GTP-binding protein SAR1b OS=Rattus norvegicus GN=Sar1b PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.058e-21 Identity = 49/128 (38.28%), Postives = 83/128 (64.84%), Query Frame = -1 Query: 432 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 815 +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD++ L S+ EL L++ ++ +P+L+LGNKID+PEA+S+E L E GL Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHLQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1B_PIG (GTP-binding protein SAR1b OS=Sus scrofa GN=SAR1B PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.058e-21 Identity = 49/128 (38.28%), Postives = 83/128 (64.84%), Query Frame = -1 Query: 432 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 815 +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD++ L S+ EL L++ ++ +P+L+LGNKID+PEA+S+E L E GL Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1B_CRIGR (GTP-binding protein SAR1b OS=Cricetulus griseus GN=SAR1B PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.058e-21 Identity = 49/128 (38.28%), Postives = 83/128 (64.84%), Query Frame = -1 Query: 432 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 815 +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD++ L S+ EL L++ ++ +P+L+LGNKID+PEA+S+E L E GL Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHIQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETIANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1B_BOVIN (GTP-binding protein SAR1b OS=Bos taurus GN=SAR1B PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.058e-21 Identity = 49/128 (38.28%), Postives = 83/128 (64.84%), Query Frame = -1 Query: 432 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGL 815 +L +GL NAGKT+L++++ + +PT+ ++T +T +DLGG + R +W+ Y A++ IV++VD AD++ L S+ EL L++ ++ +P+L+LGNKID+PEA+S+E L E GL Sbjct: 27 KLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTIAGMTFTTFDLGGHVQARRVWKNYLPAINGIVFLVDCADHERLLESKEELDSLMTDETVANVPILILGNKIDRPEAISEERLREMFGL 153
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL2_HUMAN (ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1 SV=4) HSP 1 Score: 100.908 bits (250), Expect = 9.058e-21 Identity = 54/158 (34.18%), Postives = 82/158 (51.90%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +E+ L ++GL NAGKT+++ G + + PT+GFN++ + + +WD+GGQ RS W Y + +++VVD+AD + + EL LL + L G LL+ NK D P ALS + E + L SI C S N+ IDW Sbjct: 15 RELRLLMLGLDNAGKTTILKKF-NGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDW 171
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF2_SCHPO (Probable ADP-ribosylation factor OS=Schizosaccharomyces pombe GN=SPBC1539.08 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.058e-21 Identity = 51/137 (37.23%), Postives = 79/137 (57.66%), Query Frame = -1 Query: 414 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 824 +EM + ++GL AGKT+++ + S IPTVGFN+ VT N+ +WD+GGQ + R +W Y +++VVD+AD + + +R ELH ++S + LLVL NK D P ALS + + + L + DR Sbjct: 20 KEMRILMLGLDAAGKTTILYKLKLN-QSVVTIPTVGFNVETVTYKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLDKLKDR 155
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1B_DICDI (GTP-binding protein Sar1B OS=Dictyostelium discoideum GN=sarB PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.183e-20 Identity = 54/153 (35.29%), Postives = 94/153 (61.44%), Query Frame = -1 Query: 369 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCR-AVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNI 824 +E ++ +IGL NAGKT+L++++ TG IPT+ N T GNV K +DLGGQ R +W++Y + + IV++VD++DY+++ S+SE+HD+L L+ PLL+LG+K D ++E+L++ + ++ + + NS N+ Sbjct: 19 KEAKIVIIGLGNAGKTTLLHLLVTGSLKSH-IPTLRPNAESFTYGNVNFKAYDLGGQQNLRFLWKQYVPDSKTIIVFMVDSSDYNSIIESKSEIHDILGDEHLSQSPLLILGSKCDAKGHHNRENLIDLLDIRR--------FELGLNNSNNV 162 The following BLAST results are available for this feature:
BLAST of CX671428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671428 ID=CX671428; Name=CX671428; organism=Citrus sinensis; type=EST; length=824bpback to top |