CX671428

Overview
NameCX671428
Unique NameCX671428
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL3_XENLA (ADP-ribosylation factor-like protein 3 OS=Xenopus laevis GN=arl3 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.183e-20
Identity = 51/158 (32.28%), Postives = 83/158 (52.53%), Query Frame = -1
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            QE+ + L+GL NAGKT+L+  +A+   S  + PT GFN++ V      + +WD+GGQ + R  W  Y      ++YV+D+AD      +  EL +LL +  L+G+P+L+  NK D   A    ++ E + L +I DR       S      +   ++W
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGQGVQDGMNW 172          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL3_TAEGU (ADP-ribosylation factor-like protein 3 OS=Taeniopygia guttata GN=ARL3 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.183e-20
Identity = 51/158 (32.28%), Postives = 84/158 (53.16%), Query Frame = -1
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            QE+ + L+GL NAGKT+L+  +A+   S  + PT GFN++ V      + +WD+GGQ + R  W  Y      ++YV+D+AD      +  EL +LL +  L+G+P+L+  NK D   A    ++ E + L +I DR       S  +   +   ++W
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISH-ITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALSGEGVQDGMNW 172          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL1_YEAST (ADP-ribosylation factor-like protein 1 OS=Saccharomyces cerevisiae GN=ARL1 PE=1 SV=4)

HSP 1 Score: 100.523 bits (249), Expect = 1.183e-20
Identity = 51/158 (32.28%), Postives = 84/158 (53.16%), Query Frame = -1
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            +E+ + ++GL  AGKT+++  +  G       PT+GFN+  ++  N+ + +WDLGGQ   R  W  Y    +A+++VVD+ D D +  +  ELH +L +  L    LLV  NK D+P ALS  ++ +++ L  + DR       S      I   +DW
Sbjct:   17 KELRILILGLDGAGKTTILYRLQIGEVVTTK-PTIGFNVETLSYKNLKLNVWDLGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPGALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDW 173          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1_NEUCR (Small COPII coat GTPase sar-1 OS=Neurospora crassa GN=sar-1 PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.545e-20
Identity = 51/134 (38.06%), Postives = 87/134 (64.93%), Query Frame = -1
Query:  414 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 815
            +L  +GL NAGKT+L++++     +  + PT+     +++ GNV    +DLGG  + R +W+ Y   V+ IV++VDA D++ LP +++E+  LLS   L  +P +VLGNKID PEA+S+++L +++GL   T +
Sbjct:   22 KLLFLGLDNAGKTTLLHMLKNDRVAI-LQPTLHPTSEELSVGNVKFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHERLPEAKAEIDALLSMEELAKVPFVVLGNKIDHPEAVSEDELRQRLGLWQTTGK 154          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL11_RAT (ADP-ribosylation factor-like protein 11 OS=Rattus norvegicus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.545e-20
Identity = 51/148 (34.46%), Postives = 89/148 (60.14%), Query Frame = -1
Query:  375 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKV-TKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNST 815
            ++ ++GL  AGKT+++  +  G    D +PTVGFN+  +   G+V++ LWD+GGQ + R+ W+ Y   +  +VYV+D+ D   LP + +EL ++L  P++ G+P LVL NK + P+AL   ++  ++ L+   D   C  + +C   T
Sbjct:   12 QVVMLGLDCAGKTTILYKLK-GNRLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELEEVLEDPNMAGVPFLVLANKQEAPDALPLLEIRNRLDLERFQDH--CWELRACSALT 156          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: AR13B_MOUSE (ADP-ribosylation factor-like protein 13B OS=Mus musculus GN=Arl13b PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.545e-20
Identity = 49/147 (33.33%), Postives = 88/147 (59.86%), Query Frame = -1
Query:  387 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVC-CYMISC 824
            +++ L ++GL NAGKT+    I  G + ED+ PTVGF+   + +G   + ++DLGG  R R +W+ Y      +++VVD++D + +  ++  + ++L  P ++G P+LVL NK DK  AL + D++E + L+ + +   C C +  C
Sbjct:   20 RKVTLVMVGLDNAGKTATAKGIQ-GEHPEDVAPTVGFSKIDLRQGKFQVTIFDLGGGKRIRGIWKNYYAESYGVIFVVDSSDEERMEETKETMSEVLRHPRISGKPILVLANKQDKEGALGEADVIECLSLEKLVNEHKCLCQIEPC 165          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF_NEUCR (ADP-ribosylation factor OS=Neurospora crassa GN=NCU08340 PE=3 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 2.018e-20
Identity = 50/158 (31.65%), Postives = 84/158 (53.16%), Query Frame = -1
Query:  351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824
            +EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N+   +WD+GGQ + R +W  Y +    I++VVD+ D D +  +R EL  +L++  L    LLV  NK D P A++  ++ +++GL S+  R              +   +DW
Sbjct:   19 KEMRILMVGLDAAGKTTILYKLKLGEVVTT-IPTIGFNVETVEYKNIQFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRDRVVEAREELQRMLNEDELRDALLLVFANKQDLPNAMNAAEITDKLGLSSLRQRSWYIQATCATTGDGLFEGLDW 175          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF_CRYNE (ADP-ribosylation factor OS=Cryptococcus neoformans GN=ARF PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 2.018e-20
Identity = 48/137 (35.04%), Postives = 81/137 (59.12%), Query Frame = -1
Query:  414 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 824
            +EM + ++GL  AGKT+++  +  G      IPT+GFN+  V   N++  +WD+GGQ + R +W  Y +    I++VVD+ D + +  +R EL  +LS+  L    LLV  NK D P A++  ++ +++GL S+  R
Sbjct:   16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVDSNDRERITEAREELQRMLSEDELRDALLLVFANKQDLPNAMNAAEITDKLGLHSLRQR 151          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1_EMENI (Small COPII coat GTPase sar1 OS=Emericella nidulans GN=sar1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20
Identity = 52/134 (38.81%), Postives = 83/134 (61.94%), Query Frame = -1
Query:  414 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 815
            +L  +GL NAGKT+L++++     +  + PT      ++  GN     +DLGG  + R +W+ Y   VS IV++VDA D++  P S++EL  LL+   L+ +P LVLGNKID P+A+S+++L  Q+GL   T +
Sbjct:   22 KLLFLGLDNAGKTTLLHMLKNDRVAI-LSPTAHPTSEELVIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELSKVPFLVLGNKIDHPDAVSEDELRHQLGLYQTTGK 154          
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1_ASPTN (Small COPII coat GTPase sar1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=sar1 PE=3 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20
Identity = 52/134 (38.81%), Postives = 82/134 (61.19%), Query Frame = -1
Query:  414 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 815
            +L  +GL NAGKT+L++++     +  + PT      ++  GN     +DLGG  + R +W+ Y   VS IV++VDA DY+  P S++EL  LL+   L  +P L+LGNKID P+A+S+++L  Q+GL   T +
Sbjct:   22 KLLFLGLDNAGKTTLLHMLKNDRVAI-LQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDYERFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGK 154          
The following BLAST results are available for this feature:
BLAST of CX671428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 213
Match NameE-valueIdentityDescription
ARL3_XENLA1.183e-2032.28ADP-ribosylation factor-like protein 3 OS=Xenopus ... [more]
ARL3_TAEGU1.183e-2032.28ADP-ribosylation factor-like protein 3 OS=Taeniopy... [more]
ARL1_YEAST1.183e-2032.28ADP-ribosylation factor-like protein 1 OS=Saccharo... [more]
SAR1_NEUCR1.545e-2038.06Small COPII coat GTPase sar-1 OS=Neurospora crassa... [more]
ARL11_RAT1.545e-2034.46ADP-ribosylation factor-like protein 11 OS=Rattus ... [more]
AR13B_MOUSE1.545e-2033.33ADP-ribosylation factor-like protein 13B OS=Mus mu... [more]
ARF_NEUCR2.018e-2031.65ADP-ribosylation factor OS=Neurospora crassa GN=NC... [more]
ARF_CRYNE2.018e-2035.04ADP-ribosylation factor OS=Cryptococcus neoformans... [more]
SAR1_EMENI2.635e-2038.81Small COPII coat GTPase sar1 OS=Emericella nidulan... [more]
SAR1_ASPTN2.635e-2038.81Small COPII coat GTPase sar1 OS=Aspergillus terreu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A05-B9-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671428 ID=CX671428; Name=CX671428; organism=Citrus sinensis; type=EST; length=824bp
TTTTTTTAAGCTTTCAAACCACTATTTTATTAAAAAAGCACAGCAAATAC
AGTACATGTTTACAACACAAGGCACACCAATATAGATCTATACATGAAAG
TATGATCACTTGGTATCTCAGCAATTAATACATGGGTGTTCCCAGATTCC
TGATGTAAAACTAAACAAATTATGATTTACGATAAAAAGCCAAGTCGAAA
TAAAAAACTATGGTCACACATCGACTGACCCGAGCAGACTAACAGTACAG
CTCACTCAACTCATCCTGAATCAGTTGTTGAAAACAGGCTCCCATGTAGT
TCAAAACTAGAGGAAGAAACTCAACTCTTTGATTTTGAATGCTTTACAAG
CCAATCAATAACCGTGTCAATGTTGGTAGAGTTTTTGCATGAAATCATGT
AGCAACAAACTTCTCTATCGGTAATGGACTTCAGCCCCATTTGTTCCATC
AGATCCTCTTTAGACAAGGCTTCTGGTTTATCAATCTTGTTTCCCAGTAC
CAGCAATGGGATACCATTCAGCGAGGGTTTACTTAACAAGTCATGGAGTT
CACTTCTTGACACAGGCAAGTTATCATAATCAGCAGCATCAACAACGTAA
ACAATAGCTGAAACTGCACGACAGTATCTCTCCCACATACTGCGAAACCG
TGGTTGGCCTCCAAGATCCCACAGCTTTATTGTGACATTCCCCTTAGTCA
CTTTCCTCATATTAAATCCTACTGTTGGGATCATATCTTCACTATATCCA
CCAGTTGCGATAACATTCACAAGGGATGTCTTGCCTGCATTCTGAAGCCC
TATCAAAGATAGCTCCATTTCTTG
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