CX671428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1_ASPCL (Small COPII coat GTPase sar1 OS=Aspergillus clavatus GN=sar1 PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20 Identity = 51/134 (38.06%), Postives = 83/134 (61.94%), Query Frame = -1 Query: 414 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 815 +L +GL NAGKT+L++++ + + PT ++ GN +DLGG + R +W+ Y VS IV++VDA D++ P S++EL LL+ L+ +P L+LGNKID P+A+S+++L Q+GL T + Sbjct: 22 KLLFLGLDNAGKTTLLHMLKNDRVAT-LQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHERFPESKAELDALLAMEELSKVPFLILGNKIDHPDAVSEDELRHQLGLYQTTGK 154
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20 Identity = 53/150 (35.33%), Postives = 88/150 (58.67%), Query Frame = -1 Query: 375 EMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKV-TKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNST 821 E ++ ++GL +AGKT+L+ + G + +PTVGFN+ + G+V++ LWD+GGQ R+ W+ Y +VYV+D+ D LP S +EL ++L+ P++ G+P LVL NK + P+AL + ++ L+ D C + C T Sbjct: 12 EAQVVMMGLDSAGKTTLLYKLK-GHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANKQEAPDALPLLKIRNRLSLERFQDH--CWELRGCSALT 158
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARFJ_DICDI (ADP-ribosylation factor J OS=Dictyostelium discoideum GN=arrJ PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20 Identity = 50/158 (31.65%), Postives = 87/158 (55.06%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +E + +IGL AGK++L+ + G IPT+GFN+ + N+++ +WD+GGQ + R +W+ Y +A+++VVD+ D + + + E+ +LL + L G +LV NK D A++ +++ + L SI DR+ S S I DW Sbjct: 24 KETRILMIGLDGAGKSTLLYKLKLGDVVST-IPTIGFNVETIEYKNLSMTVWDVGGQHKIRPLWKHYYHGSNAVIFVVDSTDRERMDEVKEEIDNLLIQDELKGTQILVFANKQDMNNAMNTAEIVNSLDLNSIKDRKWYVQPCSAIRSDGIYEGFDW 180
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF1_SOLTU (ADP-ribosylation factor 1 OS=Solanum tuberosum PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20 Identity = 49/158 (31.01%), Postives = 86/158 (54.43%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D D + +R EL +L++ L LLV NK D P A++ ++ +++GL S+ R + + +DW Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVNEAREELMRMLAEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: SAR1_CHAGB (Small COPII coat GTPase SAR1 OS=Chaetomium globosum GN=SAR1 PE=3 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 3.442e-20 Identity = 49/134 (36.57%), Postives = 86/134 (64.18%), Query Frame = -1 Query: 414 ELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDR 815 +L +GL NAGKT+L++++ + + PT+ +++ GNV +DLGG + R +W+ Y V+ +V++VDA D++ P +++EL LLS L+ +P +VLGNKID P+A+S+++L Q+G+ T + Sbjct: 22 KLLFLGLDNAGKTTLLHMLKNDRVAI-LQPTLHPTSEELSIGNVRFTTFDLGGHQQARRLWKDYFPEVNGVVFLVDAKDHERFPEAKAELDALLSMEELSKVPFVVLGNKIDHPDAVSEDELRHQLGMYQTTGK 154
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARFH_DICDI (ADP-ribosylation factor H OS=Dictyostelium discoideum GN=arrH PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.442e-20 Identity = 50/161 (31.06%), Postives = 92/161 (57.14%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISC---KNSTNIDTVIDW 824 ++ + +IGL AGK++L+ + G +PT+GFN+ + N+++ +WD+GGQ + R++W+ Y +AI++VVD+ D + + + E+ LL + L GI +L+ NK D A++ ++++ + L SI DR+ Y+ C K+ I DW Sbjct: 24 KQTRILMIGLDGAGKSTLLYKLKLGDIVST-VPTIGFNVETIEYKNLSMTVWDVGGQYKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDTLLIQEELKGIQILIFANKQDMNNAMNTSEIVDSLNLNSIKDRK--WYVQPCSAIKSPHGIYEGFDW 181
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARL6_BOVIN (ADP-ribosylation factor-like protein 6 OS=Bos taurus GN=ARL6 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.495e-20 Identity = 47/161 (29.19%), Postives = 95/161 (59.01%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIA-TGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSL--NGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +E+ + +GL N+GKT+++N + + S+D++PT+GF+++K +++ ++D+ GQ R+R++WE Y + AI++V+D++D + V++ EL LL+ P + IP+L NK+D +AL+ + + + L+ I D+ + +DW Sbjct: 16 KEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIQKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDKLRMVVAKEELRTLLNHPDIKHRRIPILFFANKMDLRDALTSVKVSQLLCLEDIKDKPWHICASDAIKGEGLQEGVDW 176
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF1_CATRO (ADP-ribosylation factor 1 OS=Catharanthus roseus GN=ARF1 PE=2 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 4.495e-20 Identity = 49/158 (31.01%), Postives = 85/158 (53.80%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +EM + ++GL AGKT+++ + G IPT+GFN+ V ++ +WD+GGQ + R +W Y + +++VVD+ D D + +R ELH +L++ L LLV NK D P A++ ++ ++ GL S+ R + + +DW Sbjct: 16 KEMRILMVGLDAAGKTTILYQLKLGEIVTT-IPTIGFNVETVEYQYISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKHGLHSLRQRHWYIQSTCATSGEGLYEGLDW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF12_CAEEL (ADP-ribosylation factor 1-like 2 OS=Caenorhabditis elegans GN=arf-1.2 PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 4.495e-20 Identity = 48/158 (30.38%), Postives = 88/158 (55.70%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P+A++ ++ +++GL S+ +R + + +DW Sbjct: 16 REMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYIQATCATSGDGLYEGLDW 172
BLAST of CX671428 vs. ExPASy Swiss-Prot
Match: ARF12_CAEBR (ADP-ribosylation factor 1-like 2 OS=Caenorhabditis briggsae GN=arf-1.2 PE=3 SV=3) HSP 1 Score: 98.5969 bits (244), Expect = 4.495e-20 Identity = 48/158 (30.38%), Postives = 88/158 (55.70%), Query Frame = -1 Query: 351 QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 824 +EM + ++GL AGKT+++ + G IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++VVD+ D + + +R EL +L++ L LLV NK D P+A++ ++ +++GL S+ +R + + +DW Sbjct: 16 KEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELMRMLAEDELRDAVLLVFANKQDLPQAMNAAEVTDKLGLHSLRNRSWYIQATCATSGDGLYEGLDW 172 The following BLAST results are available for this feature:
BLAST of CX671428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 213
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671428 ID=CX671428; Name=CX671428; organism=Citrus sinensis; type=EST; length=824bpback to top |