CX671427

Overview
NameCX671427
Unique NameCX671427
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: GBLP_HYDAT (Guanine nucleotide-binding protein subunit beta-like protein OS=Hydra attenuata GN=RACK1 PE=2 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.885e-86
Identity = 152/225 (67.56%), Postives = 182/225 (80.89%), Query Frame = 3
Query:   60 EGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKT-YGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 731
            E + L+GT++ H   VT IAT   N D+I++ASRDK++I W LT++++T YG  ++ LTGH+HFV DVVLSSDGQFALS SWD  LRLWDL +G + ++FVGHTKDVLSVAFS DNRQIVS SRD TIKLWNTLG+CKYTIQ+ ++H+EWVSCVRFSPNT  P IVS  WD+ VKVWNL+NCKL+    GHTGY+N V VSPDGSLCASGGKDG  +LWDL EGK
Sbjct:    2 EQMTLRGTLKGHNGWVTQIATTPQNPDLILSASRDKTLIQWQLTRDDQTNYGFPKKCLTGHNHFVSDVVLSSDGQFALSCSWDKTLRLWDLNQGITTKQFVGHTKDVLSVAFSADNRQIVSGSRDNTIKLWNTLGQCKYTIQD-ESHSEWVSCVRFSPNTQNPIIVSCGWDKMVKVWNLTNCKLKTNHFGHTGYLNAVTVSPDGSLCASGGKDGNAMLWDLNEGK 225          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: GBLP_CAEEL (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Caenorhabditis elegans GN=rack-1 PE=1 SV=3)

HSP 1 Score: 293.893 bits (751), Expect = 6.492e-79
Identity = 146/229 (63.76%), Postives = 171/229 (74.67%), Query Frame = 3
Query:   60 EGLVLKGTMRAHTDMVTAIATPIDNSDM-IVTASRDKSIIVWHLTK----EEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 731
            E + L GT+  HT  VT IAT   N    ++++SRDK+I+VW +      +E   G   R LTGH+HFV DVV+SSDGQFALSGSWD  LRLWDL +G S R+F+ HTKDVLSVAFS DNRQIVS SRD++IKLWNTL +CKYTI + D HT+WVS VRFSP+   P IVSA WD+ VKVWNL NC+L+    GHTGYVNTV VSPDGSLCASGGKDG  +LWDL EGK
Sbjct:    4 EQMKLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQIVSGSRDKSIKLWNTLAQCKYTITD-DCHTDWVSTVRFSPSNRDPVIVSAGWDKVVKVWNLGNCRLKTNHIGHTGYVNTVTVSPDGSLCASGGKDGQAMLWDLNEGK 231          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: GBLP_DICDI (Guanine nucleotide-binding protein subunit beta-like protein OS=Dictyostelium discoideum GN=gpbB PE=1 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 3.562e-77
Identity = 136/219 (62.10%), Postives = 167/219 (76.26%), Query Frame = 3
Query:   78 GTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTY-GVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 731
            G++  H   VT+IA   +N D I+++SRDK+++VW LT  + T  G A R L GHSHFVQDVV+S DGQFALSGSWD  LRLWD+ +G S R F GHT+DV+SVAFS DNRQI+S SRD TIK+WNTLGECK+T++  +AH +WVSC+RFSPNT  PTIVS SWD  VK+W++ + K   TL  HTGYVNTV +SPDGSLCASGGKD    LW+L+ GK
Sbjct:   15 GSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSHFVQDVVISHDGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISGSRDATIKVWNTLGECKFTLEGPEAHQDWVSCIRFSPNT--PTIVSGSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLCASGGKDTFACLWELSSGK 231          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: GBLP_SCHPO (Guanine nucleotide-binding protein subunit beta-like protein OS=Schizosaccharomyces pombe GN=rkp1 PE=1 SV=3)

HSP 1 Score: 287.73 bits (735), Expect = 4.653e-77
Identity = 132/224 (58.93%), Postives = 170/224 (75.89%), Query Frame = 3
Query:   54 MAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAE 725
            M E LVL+ T+  H+  VT+++T  +N D++++ SRDKSII+W+L +++  YGVA+RRLTGHSHFV D  LS D  +ALS SWD  +RLWDL +G+   +FVGHT DVLSV+ S DNRQ+VS SRD+TIK+WN +G CKYTI +G  H++WVSCVRFSPN    T VSA WD+ VKVW+L    LR +  GHTGYV+ V +SPDGSLCASGG+DG ++LWDL E
Sbjct:    1 MPEQLVLRATLEGHSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDG-GHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNE 223          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: GBLP_TRYBR (Guanine nucleotide-binding protein subunit beta-like protein OS=Trypanosoma brucei rhodesiense PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.113e-62
Identity = 119/225 (52.89%), Postives = 153/225 (68.00%), Query Frame = 3
Query:   75 KGTMRAHTDMVTAIATPI--DNSDMIVTASRDKSIIVWHLTKE----EKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 731
            +G +  H   VT++A P   + +  +V+ SRDK+++ W    +    E +YG+  RRL GHS FV DV LS++G FA+S SWD  LRLW+L  G+   +F+GHTKDVLSVAFS DNRQIVS  RD  +++WN  GEC +T+  G AHT+WVSCVRFSP+   P IVS  WD  VKVW+L+  +L   L GHT YV +V VSPDGSLCAS  KDGV  LWDL +G+
Sbjct:    6 EGQLTGHRGWVTSLACPQTPETATKVVSTSRDKTLLSWGPNPDRHSSECSYGLPDRRLEGHSAFVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGGRDNALRVWNVKGECMHTLSRG-AHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGE 229          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: GBLP_TRYBB (Guanine nucleotide-binding protein subunit beta-like protein OS=Trypanosoma brucei brucei PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.113e-62
Identity = 119/225 (52.89%), Postives = 153/225 (68.00%), Query Frame = 3
Query:   75 KGTMRAHTDMVTAIATPI--DNSDMIVTASRDKSIIVWHLTKE----EKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 731
            +G +  H   VT++A P   + +  +V+ SRDK+++ W    +    E +YG+  RRL GHS FV DV LS++G FA+S SWD  LRLW+L  G+   +F+GHTKDVLSVAFS DNRQIVS  RD  +++WN  GEC +T+  G AHT+WVSCVRFSP+   P IVS  WD  VKVW+L+  +L   L GHT YV +V VSPDGSLCAS  KDGV  LWDL +G+
Sbjct:    6 EGQLTGHRGWVTSLACPQTPETATKVVSTSRDKTLLSWGPNPDRHSSECSYGLPDRRLEGHSAFVSDVALSNNGNFAVSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQIVSGGRDNALRVWNVKGECMHTLSRG-AHTDWVSCVRFSPSLDAPVIVSGGWDNLVKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCASSDKDGVARLWDLTKGE 229          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: GBLP_LEIMA (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania major PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.654e-56
Identity = 108/225 (48.00%), Postives = 144/225 (64.00%), Query Frame = 3
Query:   75 KGTMRAHTDMVTAIATPIDNSDMI--VTASRDKSIIVWHLTKE----EKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 731
            +G ++ H   VT++A P      I  V+ SRD ++I W    +    +  YG+   RL GH+ FV  V L+    +AL+ SWD  +R+WDL  G+  R+F+ HTKDVL+VAFS D+R IVSA RD  I++WN  GEC +     D H +WVS + FSP+   P +VS SWD T+KVWN++  K   TL GH+ YV+TV VSPDGSLCASGGKDG  LLWDL+ G+
Sbjct:    4 EGHLKGHRGWVTSLACPQQAGSYIKVVSTSRDGTVISWKANPDRHSVDSDYGLPNHRLEGHTGFVSCVSLAHATDYALTASWDRSIRMWDLRNGQCQRKFLKHTKDVLAVAFSPDDRLIVSAGRDNVIRVWNVAGECMHEFLR-DGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGE 227          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: GBLP_LEIIN (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania infantum PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.009e-55
Identity = 108/225 (48.00%), Postives = 143/225 (63.56%), Query Frame = 3
Query:   75 KGTMRAHTDMVTAIATPIDNSDMI--VTASRDKSIIVWHLTKE----EKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 731
            +G ++ H   VT++A P      I  V+ SRD + I W    +    +  YG+   RL GH+ FV  V L+    +AL+ SWD  +R+WDL  G+  R+F+ HTKDVL+VAFS D+R IVSA RD  I++WN  GEC +     D H +WVS + FSP+   P +VS SWD T+KVWN++  K   TL GH+ YV+TV VSPDGSLCASGGKDG  LLWDL+ G+
Sbjct:    4 EGHLKGHRGWVTSLACPQQAGSYIKVVSTSRDGTAISWKANPDRHSVDSDYGLPSHRLEGHTGFVSCVSLAHATDYALTASWDRSIRMWDLRNGQCQRKFLKHTKDVLAVAFSPDDRLIVSAGRDNVIRVWNVAGECMHEFLR-DGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGE 227          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: GBLP_LEICH (Guanine nucleotide-binding protein subunit beta-like protein OS=Leishmania chagasi PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.009e-55
Identity = 108/225 (48.00%), Postives = 143/225 (63.56%), Query Frame = 3
Query:   75 KGTMRAHTDMVTAIATPIDNSDMI--VTASRDKSIIVWHLTKE----EKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 731
            +G ++ H   VT++A P      I  V+ SRD + I W    +    +  YG+   RL GH+ FV  V L+    +AL+ SWD  +R+WDL  G+  R+F+ HTKDVL+VAFS D+R IVSA RD  I++WN  GEC +     D H +WVS + FSP+   P +VS SWD T+KVWN++  K   TL GH+ YV+TV VSPDGSLCASGGKDG  LLWDL+ G+
Sbjct:    4 EGHLKGHRGWVTSLACPQQAGSYIKVVSTSRDGTAISWKANPDRHSVDSDYGLPSHRLEGHTGFVSCVSLAHATDYALTASWDRSIRMWDLRNGQCQRKFLKHTKDVLAVAFSPDDRLIVSAGRDNVIRVWNVAGECMHEFLR-DGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPDGSLCASGGKDGAALLWDLSTGE 227          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: GBLP_YEAST (Guanine nucleotide-binding protein subunit beta-like protein OS=Saccharomyces cerevisiae GN=ASC1 PE=1 SV=4)

HSP 1 Score: 213.772 bits (543), Expect = 8.538e-55
Identity = 107/228 (46.93%), Postives = 146/228 (64.04%), Query Frame = 3
Query:   60 EGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTL----QPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 731
            E LVL+GT+  H   VT++AT     +++++ASRDK++I W LT +++ +GV  R   GHSH VQD  L++DG +ALS SWD  LRLWD+A G++ +RFVGH  DV+SV        I+S SRD+TIK+W   G+C  T+     H +WVS VR  PN        TI+SA  D+ VK WNL+  ++ A   GH   +NT+  SPDG+L AS GKDG I+LW+LA  K
Sbjct:    5 EVLVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLL---GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKK 229          
The following BLAST results are available for this feature:
BLAST of CX671427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
GBLP_HYDAT1.885e-8667.56Guanine nucleotide-binding protein subunit beta-li... [more]
GBLP_CAEEL6.492e-7963.76Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_DICDI3.562e-7762.10Guanine nucleotide-binding protein subunit beta-li... [more]
GBLP_SCHPO4.653e-7758.93Guanine nucleotide-binding protein subunit beta-li... [more]
GBLP_TRYBR1.113e-6252.89Guanine nucleotide-binding protein subunit beta-li... [more]
GBLP_TRYBB1.113e-6252.89Guanine nucleotide-binding protein subunit beta-li... [more]
GBLP_LEIMA2.654e-5648.00Guanine nucleotide-binding protein subunit beta-li... [more]
GBLP_LEIIN1.009e-5548.00Guanine nucleotide-binding protein subunit beta-li... [more]
GBLP_LEICH1.009e-5548.00Guanine nucleotide-binding protein subunit beta-li... [more]
GBLP_YEAST8.538e-5546.93Guanine nucleotide-binding protein subunit beta-li... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A04-B7-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671427 ID=CX671427; Name=CX671427; organism=Citrus sinensis; type=EST; length=768bp
CTAACAGCAGGGGGGAAAAAAAAAATACCGAAAGTACATTTGCTATCGGA
AAAATGGCTGAAGGTCTCGTTCTCAAAGGAACCATGCGCGCCCACACCGA
CATGGTGACGGCGATCGCCACCCCAATCGACAACTCTGACATGATCGTGA
CGGCCTCGCGTGACAAGTCCATCATTGTCTGGCACCTCACTAAGGAGGAA
AAGACCTACGGCGTTGCGCGCCGTCGTTTGACCGGCCACTCTCACTTCGT
GCAGGACGTCGTCCTCTCCTCGGACGGCCAGTTCGCTCTCTCCGGCTCCT
GGGACGGCGAGCTCCGCCTCTGGGATTTGGCCGAGGGAAAATCCGCCCGC
AGGTTCGTCGGCCACACTAAGGACGTTCTCTCCGTCGCCTTCTCGATCGA
CAACCGTCAGATTGTATCGGCCTCTCGTGACCGTACGATCAAGTTGTGGA
ACACGCTCGGCGAGTGCAAGTACACGATTCAAGAGGGAGACGCTCACACT
GAGTGGGTTTCTTGTGTTAGGTTCAGCCCCAACACGCTTCAGCCCACTAT
CGTTTCCGCCTCGTGGGACCGTACGGTCAAAGTGTGGAATTTGAGCAACT
GCAAGCTTAGGGCTACTCTTGCCGGGCACACTGGATACGTGAACACCGTC
GCAGTGTCGCCGGATGGTTCGTTGTGTGCCAGTGGAGGGAAAGATGGTGT
GATTCTGTTGTGGGATTTGGCTGAGGGAAAAGACTCTACTCGCTCGACGC
TGGTGCTGTCATTCACGC
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