CX671427

Overview
NameCX671427
Unique NameCX671427
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: GBB_SOLTU (Guanine nucleotide-binding protein subunit beta OS=Solanum tuberosum GN=GB1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.883e-11
Identity = 64/234 (27.35%), Postives = 103/234 (44.02%), Query Frame = 3 
Query:   66 LVLKGTMRAHTDMVTAIA-TPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKS-------ARRFVGHTKDVLSVAFSID-NRQIVSASRDRTIKLWNTLGECKYTIQEGD---AHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNC-KLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG 728
            LV    ++ HT  V ++  TP  N   IV+AS+D  +IVW+    +KT+ +          +V     S  GQ    G  D    +++L            +R   GH   V S  +  D +  ++++S D+T  LW+     + ++  G+    HT  V  V  S +  +   VS S D T ++W+     + + T  GH   VNTV   PDG+   +G  DG   L+D+  G
Sbjct:   55 LVCCRILQGHTGKVYSLDWTPEKNR--IVSASQDGRLIVWNALTSQKTHAIKLP-----CAWVMTCAFSPSGQSVACGGLDSACSIFNLNSPIDKDGIHPVSRMLSGHKGYVSSCQYVPDEDTHLITSSGDQTCVLWDITTGLRTSVFGGEFQSGHTADVLSVSISSSNPK-LFVSGSCDTTARLWDTRVASRAQRTFHGHESDVNTVKFFPDGNRFGTGSDDGSCRLFDIRTG 280
The following BLAST results are available for this feature:
BLAST of CX671427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
GBB_SOLTU9.883e-1127.35Guanine nucleotide-binding protein subunit beta OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A04-B7-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671427 ID=CX671427; Name=CX671427; organism=Citrus sinensis; type=EST; length=768bp
CTAACAGCAGGGGGGAAAAAAAAAATACCGAAAGTACATTTGCTATCGGA
AAAATGGCTGAAGGTCTCGTTCTCAAAGGAACCATGCGCGCCCACACCGA
CATGGTGACGGCGATCGCCACCCCAATCGACAACTCTGACATGATCGTGA
CGGCCTCGCGTGACAAGTCCATCATTGTCTGGCACCTCACTAAGGAGGAA
AAGACCTACGGCGTTGCGCGCCGTCGTTTGACCGGCCACTCTCACTTCGT
GCAGGACGTCGTCCTCTCCTCGGACGGCCAGTTCGCTCTCTCCGGCTCCT
GGGACGGCGAGCTCCGCCTCTGGGATTTGGCCGAGGGAAAATCCGCCCGC
AGGTTCGTCGGCCACACTAAGGACGTTCTCTCCGTCGCCTTCTCGATCGA
CAACCGTCAGATTGTATCGGCCTCTCGTGACCGTACGATCAAGTTGTGGA
ACACGCTCGGCGAGTGCAAGTACACGATTCAAGAGGGAGACGCTCACACT
GAGTGGGTTTCTTGTGTTAGGTTCAGCCCCAACACGCTTCAGCCCACTAT
CGTTTCCGCCTCGTGGGACCGTACGGTCAAAGTGTGGAATTTGAGCAACT
GCAAGCTTAGGGCTACTCTTGCCGGGCACACTGGATACGTGAACACCGTC
GCAGTGTCGCCGGATGGTTCGTTGTGTGCCAGTGGAGGGAAAGATGGTGT
GATTCTGTTGTGGGATTTGGCTGAGGGAAAAGACTCTACTCGCTCGACGC
TGGTGCTGTCATTCACGC
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