CX671427

Overview
NameCX671427
Unique NameCX671427
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: TAF5_SCHPO (Transcription initiation factor TFIID subunit 5 OS=Schizosaccharomyces pombe GN=taf5 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 6.828e-20
Identity = 65/221 (29.41%), Postives = 102/221 (46.15%), Query Frame = 3
Query:   93 HTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARR--------RLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 731
            HT+     A    +S MI    ++  I +W +  ++K+   +          RL  HS  V     S D ++ LS S D   RLW +    +   + GHT  V  VAF        +AS D+T +LW+   +  Y ++    H   V CV F PN+    +++ S D+T ++W++          GHT  V  VA++PDG   AS   +G+I LWD+  G+
Sbjct:  322 HTNNNMNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTTFSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPFGHYFATASHDQTAQLWSC--DHIYPLRVFAGHLSDVDCVTFHPNSAY--VLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGR 538          

HSP 2 Score: 81.2629 bits (199), Expect = 6.614e-15
Identity = 55/210 (26.19%), Postives = 102/210 (48.57%), Query Frame = 3
Query:   90 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 719
            +H+  V       DN   +++ S D S  +W +  + KT  VA +   GH+  V DV     G +  + S D   +LW        R F GH  DV  V F  ++  +++ S D+T +LW+      ++++  + HT+ V+ V  +P+    T+ SA  +  + +W++   +   T+ GH G + +++ S + ++  SGG D  +  WD+
Sbjct:  377 SHSGPVYGTTFSPDNK-YLLSCSEDASARLWSV--DTKTALVAYK---GHTGPVWDVAFGPFGHYFATASHDQTAQLWSCDHIYPLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDV--HRGHSVRVFNGHTQPVTAVAIAPDG--HTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSRESTVLVSGGSDCTVRAWDV 576          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: SEL10_CAEBR (F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis briggsae GN=sel-10 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.918e-20
Identity = 74/246 (30.08%), Postives = 118/246 (47.97%), Query Frame = 3
Query:    9 RGEK--KNTESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLA--EGKD 734
            RGEK  KN  S   +G           +R H + V  I     ++D++VT S D ++ VW +       G  +  L GHS  V    +S  G++ +SGS D  +++W   +G       GHT  V  +A +  N  +V+ SRD T+++W+   E    ++    H   V CV+F  N     +VS  +D TVK+W+  + K   TL GH+  V ++    + S+  SG  D  I +WD +  EG++
Sbjct:  234 RGEKIEKNWHSRPIMGS--------AILRGHEEHV--ITCMQIHNDLLVTGSDDNTLKVWSIDD-----GEVKHTLNGHSGGVWTSQISQCGRYIVSGSTDRTVKVWRAEDGFLLHTLQGHTSTVRCMAMA--NTTLVTGSRDCTLRVWDI--ETGLHVRTLQGHQAAVRCVQFDGN----IVVSGGYDFTVKIWDAFSGKCLRTLIGHSNRVYSLLYESERSIVCSGSLDTSIRVWDFSRPEGQE 456          

HSP 2 Score: 90.8929 bits (224), Expect = 8.347e-18
Identity = 67/236 (28.39%), Postives = 113/236 (47.88%), Query Frame = 3
Query:   24 NTESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG 728
            +T+ T  + +  +G +L  T++ HT  V  +A     +  +VT SRD ++ VW +       G+  R L GH   V+ V    DG   +SG +D  +++WD   GK  R  +GH+  V S+ +  +   + S S D +I++W+ +  E +  I     HT   S ++   N L    VS + D  V+VW++        L+GH   + ++     G L A+   DG + LWD+  G
Sbjct:  317 STDRTVKVWRAEDGFLLH-TLQGHTSTVRCMAMA---NTTLVTGSRDCTLRVWDIET-----GLHVRTLQGHQAAVRCVQF--DGNIVVSGGYDFTVKIWDAFSGKCLRTLIGHSNRVYSLLYESERSIVCSGSLDTSIRVWDFSRPEGQELIAFLSGHTSLTSGMQLRGNIL----VSCNADSHVRVWDIYEGTCIHILSGHRSAITSLQWFGRG-LVATSSDDGSVKLWDIERG 536          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: APAF_HUMAN (Apoptotic protease-activating factor 1 OS=Homo sapiens GN=APAF1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 8.918e-20
Identity = 58/192 (30.21%), Postives = 94/192 (48.96%), Query Frame = 3
Query:  162 DKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKD 734
            D  ++      ++    ++R  +  H+  V     S DGQ   S   D  L+++    G+       H  +VL  AFS D+R I + S D+ +K+WN++ GE  +T  E   H+E V+C  F+ ++    + + S D  +K+W+L+  + R T+ GHT  VN    SPD  L AS   DG + LWD     +
Sbjct:  589 DNGMLYLEWINKKNITNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDE---HSEQVNCCHFTNSSHHLLLATGSSDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANE 777          

HSP 2 Score: 82.8037 bits (203), Expect = 2.273e-15
Identity = 60/207 (28.99%), Postives = 100/207 (48.31%), Query Frame = 3
Query:  144 IVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDR-TVKVWNLSNCKL--------RATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKDS 737
            ++++S D  I VW+   ++  +      L GH   V+D  L  + +  LS S+DG +++W++  G   + FV H   VLS   S D  +  S S D+T K+W+   +    + E   H     CVR S  ++  T+++   D   +++WN+SN +L            A H G+V  +  SPDG +  S G  G I  W++  G+ S
Sbjct: 1018 LISSSDDAEIQVWNWQLDKCIF------LRGHQETVKDFRLLKNSRL-LSWSFDGTVKVWNIITGNKEKDFVCHQGTVLSCDISHDATKFSSTSADKTAKIWSF--DLLLPLHELRGHN---GCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELLHLCAPLSEEGAATHGGWVTDLCFSPDGKMLISAG--GYIKWWNVVTGESS 1210          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.165e-19
Identity = 63/195 (32.31%), Postives = 96/195 (49.23%), Query Frame = 3
Query:  138 DMIVTASRDKSIIVWHLTKEE--KTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWD 716
            +++++ S D +I +W L       TY        GH + V DV  +  G + +S S+D   RLW     ++ R FVGH  DV  V F  ++  + + S DRT++LW+ +      +  G  H   VS + FS       + S S D  + +W+LSN  L  TL  HT  V T+  S DG++ A+ G D  + LWD
Sbjct:  463 NLLLSCSEDSTIRLWSLLTWSCVVTY-------RGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTG--HKGSVSSLAFS--ACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646          

HSP 2 Score: 89.3521 bits (220), Expect = 2.429e-17
Identity = 66/226 (29.20%), Postives = 97/226 (42.92%), Query Frame = 3
Query:  129 DNSDMIVTASRDKSIIVWHLT-----------------KE---------EKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG 728
            D+S M+     D S+ +W LT                 KE         +   G   R L GH+  V     + +    LS S D  +RLW L        + GH   V  V F+      VS S D+T +LW T  +    ++    H   V CV+F PN+    + + S DRTV++W+    +    + GH G V+++A S  G   ASG  D  I++WDL+ G
Sbjct:  387 DDSTMLACGFGDSSVRIWSLTPAKLRTLKDADSLRELDKESADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWAT--DSNQALRVFVGHLSDVDCVQFHPNSNY--VATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNG 608          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: KTNB1_ARATH (Katanin p80 WD40 repeat-containing subunit B1 homolog 1 OS=Arabidopsis thaliana GN=At5g23430 PE=2 SV=3)

HSP 1 Score: 97.0561 bits (240), Expect = 1.165e-19
Identity = 67/232 (28.88%), Postives = 101/232 (43.53%), Query Frame = 3
Query:   90 AHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGE-CKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL------AEGKDSTRSTLVLSF 764
            AH+  V  +     +S ++VT   D  + +W + K       A   L GHS  +  V   +      +G+  G ++LWDL E K  R   GH  + +SV F        S S D  +K+W+   + C +T +    HT  V+ +RF+P+     +VS   D  VKVW+L+  KL      H G + ++   P   L A+G  D  +  WDL        G   T     LSF
Sbjct:   14 AHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPN-----AILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYK---GHTRGVNVLRFTPDGRW--VVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSF 235          

HSP 2 Score: 82.4185 bits (202), Expect = 2.969e-15
Identity = 66/238 (27.73%), Postives = 111/238 (46.64%), Query Frame = 3
Query:   12 GEKKNTESTFAIGKMAEGLVLKGTMRAHTDMVTAIATPIDNSDMIVTASRDKSII-VWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGV-ILLWD 716
            G + +  + +AIGK    L L G    H+  + ++    D S+++V A      I +W L + +       R LTGH      V     G+F  SGS D  L++WD+ +      + GHT+ V  + F+ D R +VS   D  +K+W+ T G+    + E  +H   +  + F P+     + + S DRTVK W+L   +L  +    T  V  ++ +PDG     G ++ + I  W+
Sbjct:   35 GGEDHKVNLWAIGKPNAILSLYG----HSSGIDSVT--FDASEVLVAAGAASGTIKLWDLEEAKIV-----RTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGK---LLTEFKSHEGQIQSLDFHPHEF--LLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGLQESLKIFSWE 256          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: MUT11_CHLRE (Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut11 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.987e-19
Identity = 55/168 (32.74%), Postives = 85/168 (50.60%), Query Frame = 3
Query:  228 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG 728
            L+GH+  V  V  S DG    SGS D  + LWD A G       GH+  V  VA++ + R + +A+ D ++KLW+   G C  T+     HT +V C  F        + S S+D T+++W++ + +    +  H+  V + A S DGS+  +   DG+I LWD   G
Sbjct:   36 LSGHTKAVAAVKFSPDGSLLASGSADRTVALWDAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTL---TGHTNYVFCCNFD-GAAGHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWDTQTG 199          

HSP 2 Score: 81.6481 bits (200), Expect = 5.064e-15
Identity = 70/273 (25.64%), Postives = 112/273 (41.03%), Query Frame = 3
Query:   84 MRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQF-------------------------------------------ALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNT-LGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDG--------------SLCASGGKDGVILLWDLAEG 728
            +  HT  V A+    D S ++ + S D+++ +W     +   G     L GHS  V DV  + +G++                                             SGS+D  LRLWD+  G+  R    H+  V S AFS D   +V++S D  I+LW+T  G C  T+ + D+    VS   F+PN     ++  + D   K+W+ +  + R T AG  G+VNT      G              S+  +G +DG +  +D++ G
Sbjct:   36 LSGHTKAVAAVKFSPDGS-LLASGSADRTVALW-----DAATGARVNTLAGHSCGVSDVAWNPNGRYLATAADDHSLKLWDAETGACLRTLTGHTNYVFCCNFDGAAGHLLASGSFDETLRLWDVRSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDGLIRLWDTQTGHCLKTLFDRDSPP--VSFAAFTPNA--KYVLCNTLDGRAKLWDYAAGRTRRTYAG--GHVNTQFCISSGFLGGSSSASFDLGCSMVVTGSEDGSLAAYDISTG 296          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: TAF5_HUMAN (Transcription initiation factor TFIID subunit 5 OS=Homo sapiens GN=TAF5 PE=1 SV=3)

HSP 1 Score: 95.9005 bits (237), Expect = 2.595e-19
Identity = 59/167 (35.33%), Postives = 79/167 (47.31%), Query Frame = 3
Query:  228 LTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG 728
            L GHS  V     S D  + LS S DG +RLW L        + GH   V    FS      VS   DR  +LW T       I  G  H   V+C RF PN+    + + S DRTV++W++ N        GH G ++++  SP+G   A+G  DG +LLWD+  G
Sbjct:  539 LYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAG--HLADVNCTRFHPNSNY--VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG 701          

HSP 2 Score: 87.0409 bits (214), Expect = 1.205e-16
Identity = 58/194 (29.90%), Postives = 93/194 (47.94%), Query Frame = 3
Query:  144 IVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECK--YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWD 716
            ++++S D ++ +W L       G       GH++ V D   S  G + +SG  D   RLW     +  R F GH  DV    F  ++  + + S DRT++LW+ L G C   +T  +G  H+     + FSPN     + + + D  V +W++ +  +   L GHT  V ++  S DG + ASG  D  + LWD
Sbjct:  558 LLSSSEDGTVRLWSLQTFTCLVGYK-----GHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHS-----LTFSPNGR--FLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739          

HSP 3 Score: 72.0182 bits (175), Expect = 4.012e-12
Identity = 35/109 (32.11%), Postives = 56/109 (51.38%), Query Frame = 3
Query:  132 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL 458
            NS+ + T S D+++ +W +       G   R  TGH   +  +  S +G+F  +G+ DG + LWD+  G       GHT  V S+ FS D   + S S D T++LW+ +
Sbjct:  638 NSNYVATGSADRTVRLWDVLN-----GNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAI 741          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: POP2_SCHPO (WD repeat-containing protein pop2 OS=Schizosaccharomyces pombe GN=pop2 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.595e-19
Identity = 61/212 (28.77%), Postives = 107/212 (50.47%), Query Frame = 3
Query:  144 IVTASRDKSIIVWHLTKE-------EKTYGVAR--------RRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 731
            IV+ SRD ++ VW L K        + T  + R          L GH+  V+ +  S  G   +SGS+D  +R+W ++ G+      GH+  + SV +  +    +S S D++I++W+ + G CKY ++  DA    +       N  Q  ++S S D T+++W+L+  K    L  ++GY+++  VS +  + +  G DG + LWD+  GK
Sbjct:  460 IVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPYFVHTLIGHTDSVRTI--SGYGDILVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTCKYVLEGHDAFVTLL-------NVFQNRLISGSADSTIRIWDLNTGKPLMVLPSNSGYISSF-VSDEHKIIS--GNDGSVKLWDVRTGK 659          

HSP 2 Score: 70.4774 bits (171), Expect = 1.167e-11
Identity = 58/231 (25.11%), Postives = 100/231 (43.29%), Query Frame = 3
Query:  132 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNR--------------QIVSASRDRTIKLW---------------NTLGECK---YTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG 728
            + D I+T S   +I + +        GV   RL GH   V  V +  +    +SGS D  +R+W++ + K    F GH   +  +   + +R               IVS SRD T+++W               N++   +   Y +     HT+ V  +    + L    VS S+D ++++W +S  +    L GH+  + +V   P+ ++C SG  D  I +WDL+ G
Sbjct:  360 HKDRIITTSGSGTIQIHNAIT-----GVLEARLEGHKEGVWAVKIHENT--LVSGSIDKTVRVWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWKLPKNTDPPYLPDNTNSIDRWEKNPYFVHTLIGHTDSVRTISGYGDIL----VSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTG 579          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: MET30_YEAST (F-box protein MET30 OS=Saccharomyces cerevisiae GN=MET30 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.595e-19
Identity = 64/198 (32.32%), Postives = 104/198 (52.53%), Query Frame = 3
Query:  132 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVV-LSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDL 719
            N+D+    +R   +I     K E  +     R+      +  V+ L  + +   +GS+D  + +WDL  GK  RR  GH+  V ++ F  D+R++++ S D+TI++WN + GEC  T +    H++ V     S ++ Q  IVS S D+TVKVW++ + +   TL GHT +VN V + P    C S   D  I +WD+
Sbjct:  263 NADIQTQTTRPWKVIYRERFKVESNWRKGHCRIQEFKGHMDGVLTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF--DDRKLITGSLDKTIRVWNYITGECISTYR---GHSDSV----LSVDSYQKVIVSGSADKTVKVWHVES-RTCYTLRGHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDI 450          

HSP 2 Score: 68.9366 bits (167), Expect = 3.397e-11
Identity = 62/220 (28.18%), Postives = 95/220 (43.18%), Query Frame = 3
Query:   81 TMRAHTDMVTAIATPIDNSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYT--IQEGDAHTEWVSCVRFSPNTLQPT-IVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK 731
            T R H+D V ++ +      +IV+ S DK++ VWH+  E +T    R    GH+ +V  V L        S S D  +R+WD+      + F GH   V  +   +  + + + + D T    +   +   T    E D  +     V    N   PT ++S   D T+K+W++   K   T  GH   V  +A   D     SG  DG I +WDL  GK
Sbjct:  377 TYRGHSDSVLSVDS---YQKVIVSGSADKTVKVWHV--ESRTCYTLR----GHTEWVNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKI-IPLTIKDVENLATDNTSDGSSPQDDPTMTDGADESDTPSNEQETV-LDENIPYPTHLLSCGLDNTIKLWDVKTGKCIRTQFGHVEGVWDIAA--DNFRIISGSHDGSIKVWDLQSGK 583          
BLAST of CX671427 vs. ExPASy Swiss-Prot
Match: LIN23_CAEEL (F-box/WD repeat-containing protein lin-23 OS=Caenorhabditis elegans GN=lin-23 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.595e-19
Identity = 67/200 (33.50%), Postives = 103/200 (51.50%), Query Frame = 3
Query:  132 NSDMIVTASRDKSIIVWHLTKEEKTYGVARRRLTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLAEGKSARRFVGHTKDVLSVAFSIDNRQIVSASRDRTIKLWNTLGECKYTIQEG-DAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEG 728
            + D IV+  RD +I +W    + K Y  +R  L+GH+  V  + L  D +  +SGS D  +R+WD+  G+  +  + H + VL + F+  N  +V+ S+DR+I +W+ +     TI+     H   V+ V F        IVSAS DRT+KVW++   +   TLAGH   +    +   G L  SG  D  I LWD+  G
Sbjct:  231 DDDKIVSGLRDNTIKIW----DRKDYSCSRI-LSGHTGSV--LCLQYDNRVIISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDFDDRY----IVSASGDRTIKVWSMDTLEFVRTLAGHRRGI--ACLQYRGRLVVSGSSDNTIRLWDIHSG 415          
The following BLAST results are available for this feature:
BLAST of CX671427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 421
Match NameE-valueIdentityDescription
TAF5_SCHPO6.828e-2029.41Transcription initiation factor TFIID subunit 5 OS... [more]
SEL10_CAEBR8.918e-2030.08F-box/WD repeat-containing protein sel-10 OS=Caeno... [more]
APAF_HUMAN8.918e-2030.21Apoptotic protease-activating factor 1 OS=Homo sap... [more]
TAF5_DROME1.165e-1932.31Transcription initiation factor TFIID subunit 5 OS... [more]
KTNB1_ARATH1.165e-1928.88Katanin p80 WD40 repeat-containing subunit B1 homo... [more]
MUT11_CHLRE1.987e-1932.74Protein Mut11 OS=Chlamydomonas reinhardtii GN=Mut1... [more]
TAF5_HUMAN2.595e-1935.33Transcription initiation factor TFIID subunit 5 OS... [more]
POP2_SCHPO2.595e-1928.77WD repeat-containing protein pop2 OS=Schizosacchar... [more]
MET30_YEAST2.595e-1932.32F-box protein MET30 OS=Saccharomyces cerevisiae GN... [more]
LIN23_CAEEL2.595e-1933.50F-box/WD repeat-containing protein lin-23 OS=Caeno... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_11A04_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-11A04-B7-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671427 ID=CX671427; Name=CX671427; organism=Citrus sinensis; type=EST; length=768bp
CTAACAGCAGGGGGGAAAAAAAAAATACCGAAAGTACATTTGCTATCGGA
AAAATGGCTGAAGGTCTCGTTCTCAAAGGAACCATGCGCGCCCACACCGA
CATGGTGACGGCGATCGCCACCCCAATCGACAACTCTGACATGATCGTGA
CGGCCTCGCGTGACAAGTCCATCATTGTCTGGCACCTCACTAAGGAGGAA
AAGACCTACGGCGTTGCGCGCCGTCGTTTGACCGGCCACTCTCACTTCGT
GCAGGACGTCGTCCTCTCCTCGGACGGCCAGTTCGCTCTCTCCGGCTCCT
GGGACGGCGAGCTCCGCCTCTGGGATTTGGCCGAGGGAAAATCCGCCCGC
AGGTTCGTCGGCCACACTAAGGACGTTCTCTCCGTCGCCTTCTCGATCGA
CAACCGTCAGATTGTATCGGCCTCTCGTGACCGTACGATCAAGTTGTGGA
ACACGCTCGGCGAGTGCAAGTACACGATTCAAGAGGGAGACGCTCACACT
GAGTGGGTTTCTTGTGTTAGGTTCAGCCCCAACACGCTTCAGCCCACTAT
CGTTTCCGCCTCGTGGGACCGTACGGTCAAAGTGTGGAATTTGAGCAACT
GCAAGCTTAGGGCTACTCTTGCCGGGCACACTGGATACGTGAACACCGTC
GCAGTGTCGCCGGATGGTTCGTTGTGTGCCAGTGGAGGGAAAGATGGTGT
GATTCTGTTGTGGGATTTGGCTGAGGGAAAAGACTCTACTCGCTCGACGC
TGGTGCTGTCATTCACGC
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