CX671426
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR5B_MOUSE (WD repeat-containing protein 5B OS=Mus musculus GN=Wdr5b PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.427e-15 Identity = 56/202 (27.72%), Postives = 98/202 (48.51%), Query Frame = -3 Query: 234 TIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDG-STLFSGYTDGVIRVWGI 824 T+K+W+ G+C T++ H+++V C F+P + IVS S+D +VK+W + K TL+ H+ ++ V + +GSL SG DG+ +WD A G+ L +L + + + FSPN +Y L A + ++K+WD ++ YC ++SV G + SG D ++ +W + Sbjct: 104 TLKVWDMRSGKCLKTLK---GHSDFVFCCDFNPPS--NLIVSGSFDESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNTLKLWDYSRGRCLK------------------TYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIWNL 282
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: TG125_CAEEL (WD repeat-containing protein tag-125 OS=Caenorhabditis elegans GN=tag-125 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.655e-14 Identity = 51/181 (28.18%), Postives = 86/181 (47.51%), Query Frame = -3 Query: 234 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSL--DAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGST-LFSGYTDGVIRVWGI 764 H +V C F+P + +VS S+D +V++W++ TL H+ V+ V+ + DGSL ASG DG++ +WD A G+ + +L D + + FSPN +Y L + + ++K+WD ++ + YC N+SV G + SG D I +W + Sbjct: 170 HNNYVFCCNFNPQS--SLVVSGSFDESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQ------------------YTGHENSKYCIFANFSVTGGKWIISGSEDCKIYIWNL 330
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: POF1_SCHPO (F-box/WD repeat-containing protein pof1 OS=Schizosaccharomyces pombe GN=pof1 PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.822e-14 Identity = 65/199 (32.66%), Postives = 90/199 (45.23%), Query Frame = -3 Query: 240 TIKLWN-TLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG-AVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSV--DGSTLFSGYTDGVIRVW 824 TI++WN EC +I G HT+ V C+ F L VS S D TVK+W+ S K R TL GHTG VN+V + D L SG D I +W L L++ A + +L + +R + C + + +IK WD+E K V L + W + D L SG DGV++VW Sbjct: 334 TIRIWNYRTSEC-ISILHG--HTDSVLCLTFDSTLL----VSGSADCTVKLWHFSGGK-RITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLALADSRLFSC-SLDGTIKQWDIEKKKCVHTLFGHIEGV------------------------WEIAADHLRLISGAHDGVVKVW 499
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: GBB3_MOUSE (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Mus musculus GN=Gnb3 PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 8.211e-14 Identity = 56/184 (30.43%), Postives = 87/184 (47.28%), Query Frame = -3 Query: 240 QEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPNRYWLCAATEQ-SIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSTLFSGYTDGVIRVW 779 +E AHT ++SC RF + IV++S D T +W++ + + GHTG ++AVSPD L SG D LWD+ EG R + I+A+CF PN +C ++ S +++DL + + + +I C TS+ +S+ G LF+GY D VW Sbjct: 137 RELSAHTGYLSCCRFLDDN---NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSQE--------------------SIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: GBB3_RAT (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Rattus norvegicus GN=Gnb3 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.072e-13 Identity = 56/184 (30.43%), Postives = 87/184 (47.28%), Query Frame = -3 Query: 240 QEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPNRYWLCAATEQ-SIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSTLFSGYTDGVIRVW 779 +E AHT ++SC RF + IV++S D T +W++ + + GHTG ++AVSPD L SG D LWD+ EG R + I+A+CF PN +C ++ S +++DL + + + +I C TS+ +S+ G LF+GY D VW Sbjct: 137 RELSAHTGYLSCCRFLDDN---NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDYKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSHE--------------------SIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: GBB3_HUMAN (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Homo sapiens GN=GNB3 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.072e-13 Identity = 56/184 (30.43%), Postives = 88/184 (47.83%), Query Frame = -3 Query: 240 QEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPNRYWLCAATEQ-SIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSTLFSGYTDGVIRVW 779 +E AHT ++SC RF + IV++S D T +W++ + + GHTG ++AVSPD +L SG D LWD+ EG R + I+A+CF PN +C ++ S +++DL + + ++I C TS+ +S+ G LF+GY D VW Sbjct: 137 RELSAHTGYLSCCRFLDDN---NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQEL--------------------ICFSHESIICGITSVAFSLSGRLLFAGYDDFNCNVW 297
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: GBB3_CANFA (Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 OS=Canis familiaris GN=GNB3 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.401e-13 Identity = 55/184 (29.89%), Postives = 87/184 (47.28%), Query Frame = -3 Query: 240 QEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK-RLYSLDAGAVIHALCFSPNRYWLCAATEQ-SIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYC--TSLNWSVDGSTLFSGYTDGVIRVW 779 +E AHT ++SC RF + IV++S D T +W++ + + GHTG ++AVSPD L SG D LWD+ EG R + I+A+CF PN +C ++ S +++DL + + + +I C TS+ +S+ G LF+GY D +W Sbjct: 137 RELSAHTGYLSCCRFLDDN---NIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFKLFISGACDASAKLWDVREGTCRQTFTGHESDINAICFFPNGEAICTGSDDASCRLFDLRADQELTAYSDE--------------------SIICGITSVAFSLSGRLLFAGYDDFNCNIW 297
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR48_DROPS (WD repeat-containing protein 48 homolog OS=Drosophila pseudoobscura pseudoobscura GN=GA21511 PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 3.120e-13 Identity = 62/211 (29.38%), Postives = 97/211 (45.97%), Query Frame = -3 Query: 228 IKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 821 I++WNT E KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ L + + I++L +P+ + +TE ++IWD ++ + +K+ +N+ C L S DG+ + SG +DG I+VW +G+ Sbjct: 52 IRVWNTRSESSEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWD--PRTCMRSMKL----------------RGHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR48_DROPE (WD repeat-containing protein 48 homolog OS=Drosophila persimilis GN=GL16745 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.120e-13 Identity = 62/211 (29.38%), Postives = 97/211 (45.97%), Query Frame = -3 Query: 228 IKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 821 I++WNT E KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ L + + I++L +P+ + +TE ++IWD ++ + +K+ +N+ C L S DG+ + SG +DG I+VW +G+ Sbjct: 52 IRVWNTRSESSEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWD--PRTCMRSMKL----------------RGHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR48_DROMO (WD repeat-containing protein 48 homolog OS=Drosophila mojavensis GN=GI19644 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.322e-13 Identity = 62/211 (29.38%), Postives = 97/211 (45.97%), Query Frame = -3 Query: 228 IKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 821 I++WNT E KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ L + + I++L +P+ + +TE ++IWD ++ + +K+ +N+ C L S DG+ + SG +DG I+VW +G+ Sbjct: 52 IRVWNTRTEANEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAHKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWD--PRTCMRSMKL----------------RGHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239 The following BLAST results are available for this feature:
BLAST of CX671426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671426 ID=CX671426; Name=CX671426; organism=Citrus sinensis; type=EST; length=826bpback to top |