CX671426
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR48_DROAN (WD repeat-containing protein 48 homolog OS=Drosophila ananassae GN=GF12420 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 5.322e-13 Identity = 62/211 (29.38%), Postives = 97/211 (45.97%), Query Frame = -3 Query: 228 IKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 821 I++WNT E KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ L + + I++L +P+ + +TE ++IWD ++ + +K+ +N+ C L S DG+ + SG +DG I+VW +G+ Sbjct: 52 IRVWNTRTESNEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWD--PRTCMRSMKL----------------RGHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: YIDC_SCHPO (Uncharacterized WD repeat-containing protein C227.12 OS=Schizosaccharomyces pombe GN=SPAC227.12 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.951e-13 Identity = 49/146 (33.56%), Postives = 74/146 (50.68%), Query Frame = -3 Query: 393 TIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAG-AVIHALCFSPNRYWLC-AATEQSIKIWDLESKSIVEDL 824 T+ LW EG H V V F P+ +VSAS+D T ++W++ GH+ + ++A PDGSL +SGG D + +WDL GK + LD I A+ +SPN Y L ++ + ++KIWDL S+ + Sbjct: 246 TVCLWKASQSTPLLRLEG--HLARVGRVAFHPSG--DYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTI 387
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDS_DROME (Protein will die slowly OS=Drosophila melanogaster GN=wds PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.951e-13 Identity = 48/177 (27.12%), Postives = 87/177 (49.15%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC-FSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 764 HT+ VS V+FSPN + S+S D+ +K+W + K T++GH ++ VA S D L SG D + +W+L+ GK L +L + C F+P + + + ++S++IWD+ + ++ L ++++++ DGS + S DG+ R+W Sbjct: 71 HTKAVSAVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDP--------------------VSAVHFNRDGSLIVSSSYDGLCRIW 225
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR48_DROVI (WD repeat-containing protein 48 homolog OS=Drosophila virilis GN=GJ15009 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.951e-13 Identity = 62/211 (29.38%), Postives = 97/211 (45.97%), Query Frame = -3 Query: 228 IKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 821 I++WNT E KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ L + + I++L +P+ + +TE ++IWD ++ + +K+ +N+ C L S DG+ + SG +DG I+VW +G+ Sbjct: 52 IRVWNTRTESNDKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAHKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWD--PRTCMRSMKL----------------RGHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR48_DROGR (WD repeat-containing protein 48 homolog OS=Drosophila grimshawi GN=GH21936 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.951e-13 Identity = 62/211 (29.38%), Postives = 97/211 (45.97%), Query Frame = -3 Query: 228 IKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 821 I++WNT E KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ L + + I++L +P+ + +TE ++IWD ++ + +K+ +N+ C L S DG+ + SG +DG I+VW +G+ Sbjct: 52 IRVWNTRTESNEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAHKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWD--PRTCMRSMKL----------------RGHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WD51B_HUMAN (WD repeat-containing protein 51B OS=Homo sapiens GN=WDR51B PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.951e-13 Identity = 42/128 (32.81%), Postives = 71/128 (55.47%), Query Frame = -3 Query: 390 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL--YSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLK 764 HT WV C +FSP+ IVS S D+T+K+W+ +N + + G+ N V +P G+ AS G D + +WD+ K L Y + +G V + + F P+ Y + A+++ ++KI DL ++ L+ Sbjct: 143 HTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV-NCISFHPSGNYLITASSDGTLKILDLLEGRLIYTLQ 267
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WD51B_PONAB (WD repeat-containing protein 51B OS=Pongo abelii GN=WDR51B PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.079e-13 Identity = 42/128 (32.81%), Postives = 71/128 (55.47%), Query Frame = -3 Query: 390 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRL--YSLDAGAVIHALCFSP-NRYWLCAATEQSIKIWDLESKSIVEDLK 764 HT WV C +FSP+ IVS S D+T+K+W+ +N + + G+ N V +P G+ AS G D + +WD+ K L Y + +G V + + F P + Y + A+++ ++KI DL ++ L+ Sbjct: 143 HTHWVRCAKFSPDGR--LIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHSGGV-NCISFHPSDNYLVTASSDGTLKILDLLEGRLIYTLQ 267
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: TAF5L_HUMAN (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Homo sapiens GN=TAF5L PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.079e-13 Identity = 57/200 (28.50%), Postives = 90/200 (45.00%), Query Frame = -3 Query: 234 TIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 824 +I+ W+ + +G A+ W + SP +L S S DRT ++W+ AGH V+ V P+ + A+G D + LW +G RL++ G V+ +L FSPN +Y A +Q +K+WDL S ++ ++L+ NI TSL +S D + S D +RVW I Sbjct: 365 SIRYWDLGSFTNTVLYQGHAYPVWD--LDISPYSLY--FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVL-SLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELR------------------GHTDNI--TSLTFSPDSGLIASASMDNSVRVWDI 539 HSP 2 Score: 71.2478 bits (173), Expect = 7.685e-12 Identity = 46/140 (32.86%), Postives = 75/140 (53.57%), Query Frame = -3 Query: 414 TIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV--IHALCFSPNRYWLCAAT-EQSIKIWDLES 824 T +LW+ + Y ++ H V CV+F PN+ + + S D+TV++W+ GH G V ++A SP+G AS G+D + LWDLA G LY G I +L FSP+ + +A+ + S+++WD+ + Sbjct: 407 TARLWSF--DRTYPLRIYAGHLADVDCVKFHPNSNY--LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASG-TLYKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRN 541
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR48_DROYA (WD repeat-containing protein 48 homolog OS=Drosophila yakuba GN=GE13034 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12 Identity = 61/211 (28.91%), Postives = 97/211 (45.97%), Query Frame = -3 Query: 228 IKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 821 I++WNT + KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ L + + I++L +P+ + +TE ++IWD ++ + +K+ +N+ C L S DG+ + SG +DG I+VW +G+ Sbjct: 52 IRVWNTRTDSSEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWD--PRTCMRSMKL----------------RGHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR48_DROER (WD repeat-containing protein 48 homolog OS=Drosophila erecta GN=GG22678 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.186e-12 Identity = 61/211 (28.91%), Postives = 97/211 (45.97%), Query Frame = -3 Query: 228 IKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 821 I++WNT + KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ L + + I++L +P+ + +TE ++IWD ++ + +K+ +N+ C L S DG+ + SG +DG I+VW +G+ Sbjct: 52 IRVWNTRTDSSEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWD--PRTCMRSMKL----------------RGHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239 The following BLAST results are available for this feature:
BLAST of CX671426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671426 ID=CX671426; Name=CX671426; organism=Citrus sinensis; type=EST; length=826bpback to top |