CX671426
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR5_XENTR (WD repeat-containing protein 5 OS=Xenopus tropicalis GN=wdr5 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.549e-12 Identity = 47/177 (26.55%), Postives = 88/177 (49.72%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC-FSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 764 HT+ VS V+FSPN + S+S D+ +K+W + K T++GH ++ VA S D +L S D + +WD++ GK L +L + C F+P + + + ++S++IWD+++ ++ L ++++++ DGS + S DG+ R+W Sbjct: 44 HTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--------------------VSAVHFNRDGSLIVSSSYDGLCRIW 198
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR5_RAT (WD repeat-containing protein 5 OS=Rattus norvegicus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.549e-12 Identity = 47/177 (26.55%), Postives = 88/177 (49.72%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC-FSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 764 HT+ VS V+FSPN + S+S D+ +K+W + K T++GH ++ VA S D +L S D + +WD++ GK L +L + C F+P + + + ++S++IWD+++ ++ L ++++++ DGS + S DG+ R+W Sbjct: 44 HTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--------------------VSAVHFNRDGSLIVSSSYDGLCRIW 198
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR5_MOUSE (WD repeat-containing protein 5 OS=Mus musculus GN=Wdr5 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.549e-12 Identity = 47/177 (26.55%), Postives = 88/177 (49.72%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC-FSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 764 HT+ VS V+FSPN + S+S D+ +K+W + K T++GH ++ VA S D +L S D + +WD++ GK L +L + C F+P + + + ++S++IWD+++ ++ L ++++++ DGS + S DG+ R+W Sbjct: 44 HTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--------------------VSAVHFNRDGSLIVSSSYDGLCRIW 198
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR5_HUMAN (WD repeat-containing protein 5 OS=Homo sapiens GN=WDR5 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.549e-12 Identity = 47/177 (26.55%), Postives = 88/177 (49.72%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC-FSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 764 HT+ VS V+FSPN + S+S D+ +K+W + K T++GH ++ VA S D +L S D + +WD++ GK L +L + C F+P + + + ++S++IWD+++ ++ L ++++++ DGS + S DG+ R+W Sbjct: 44 HTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--------------------VSAVHFNRDGSLIVSSSYDGLCRIW 198
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR5_BOVIN (WD repeat-containing protein 5 OS=Bos taurus GN=WDR5 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.549e-12 Identity = 47/177 (26.55%), Postives = 88/177 (49.72%), Query Frame = -3 Query: 240 HTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALC-FSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVW 764 HT+ VS V+FSPN + S+S D+ +K+W + K T++GH ++ VA S D +L S D + +WD++ GK L +L + C F+P + + + ++S++IWD+++ ++ L ++++++ DGS + S DG+ R+W Sbjct: 44 HTKAVSSVKFSPNG--EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDP--------------------VSAVHFNRDGSLIVSSSYDGLCRIW 198
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR48_DROSI (WD repeat-containing protein 48 homolog OS=Drosophila simulans GN=GD25924 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.549e-12 Identity = 61/211 (28.91%), Postives = 95/211 (45.02%), Query Frame = -3 Query: 228 IKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 821 I++WNT + KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ L + + I++L +P+ + +TE ++IWD + + L+ +N+ C L S DG+ + SG +DG I+VW +G+ Sbjct: 52 IRVWNTRTDSSEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRIMKLR------------------GHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR48_DROSE (WD repeat-containing protein 48 homolog OS=Drosophila sechellia GN=GM20456 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.549e-12 Identity = 61/211 (28.91%), Postives = 95/211 (45.02%), Query Frame = -3 Query: 228 IKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 821 I++WNT + KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ L + + I++L +P+ + +TE ++IWD + + L+ +N+ C L S DG+ + SG +DG I+VW +G+ Sbjct: 52 IRVWNTRTDSSEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRIMKLR------------------GHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: Y1491_SYNY3 (Uncharacterized WD repeat-containing protein sll1491 OS=Synechocystis sp. (strain PCC 6803) GN=sll1491 PE=4 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.022e-12 Identity = 55/200 (27.50%), Postives = 93/200 (46.50%), Query Frame = -3 Query: 234 TIKLWNTL-GECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV-IHALCFSPNRYWLCAAT-EQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 824 TI++W G T+ + T + V F+P+ Q + DRT+K W+ + +L T G++N +AV+PDG G + W+LA+ K L+S+ ++ I+ + SPN W+ A E +I I+DL + V L+ + SL +S DG+TL+SG D +++W + Sbjct: 168 TIRIWERASGNLIQTLADNLGPT---TSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDGRKLV-GAVRNFVKAWNLADAKELFSVRGPSLEINTIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLR--------------------GHQGWVLSLAFSPDGNTLYSGAEDKTVKIWDL 343
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: WDR48_DROME (WD repeat-containing protein 48 homolog OS=Drosophila melanogaster GN=CG9062 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.022e-12 Identity = 61/211 (28.91%), Postives = 97/211 (45.97%), Query Frame = -3 Query: 228 IKLWNTLGEC--KYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAV----------IHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 821 I++WNT + KY IQ + H +WV+ + N ++SAS D TVKVWN +TL H YV +A + D AS G D I LWD+ L + + I++L +P+ + +TE ++IWD ++ + +K+ +N+ C L S DG+ + SG +DG I+VW +G+ Sbjct: 52 IRVWNTRTDSSEKY-IQSMEHHNDWVNDIVLCCNGRN--LISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAKDREQVASAGLDKAIFLWDVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWD--PRTCMRRMKL----------------RGHTENVRC--LVVSPDGNQVVSGSSDGTIKVWNLGQ 239
BLAST of CX671426 vs. ExPASy Swiss-Prot
Match: TAF5L_MOUSE (TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L OS=Mus musculus GN=Taf5l PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.641e-12 Identity = 56/200 (28.00%), Postives = 88/200 (44.00%), Query Frame = -3 Query: 234 TIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGK--RLYSLDAGAVIHALCFSPN-RYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXKNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 824 +I+ W+ + +G A+ W V SP +L S S DRT ++W+ AGH V+ V P+ + A+G D + LW +G RL++ G V+ +L FSPN +Y A +Q +K+WDL S ++ ++L+ TSL +S D + S D +RVW I Sbjct: 365 SIRYWDLGSFTNTVLYQGHAYPVWD--VDISPFSLY--FASGSHDRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVL-SLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELR--------------------GHTDSITSLAFSPDSGLIASASMDNSVRVWDI 539 HSP 2 Score: 71.633 bits (174), Expect = 5.885e-12 Identity = 44/139 (31.65%), Postives = 73/139 (52.52%), Query Frame = -3 Query: 414 TIKLWNTLGECKYTIQEGDAHTEWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGA-VIHALCFSPNRYWLCAAT-EQSIKIWDLES 824 T +LW+ + Y ++ H V CV+F PN+ + + S D+TV++W+ GH G V +++ SP+G AS G+D + LWDLA G L I +L FSP+ + +A+ + S+++WD+ S Sbjct: 407 TARLWSF--DRTYPLRIYAGHLADVDCVKFHPNSNY--LATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLIASASMDNSVRVWDIRS 541 The following BLAST results are available for this feature:
BLAST of CX671426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 108
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671426 ID=CX671426; Name=CX671426; organism=Citrus sinensis; type=EST; length=826bpback to top |