CX671416

Overview
NameCX671416
Unique NameCX671416
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length916
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SUS2_ARATH (Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g49190 PE=2 SV=2)

HSP 1 Score: 352.829 bits (904), Expect = 1.565e-96
Identity = 169/235 (71.91%), Postives = 197/235 (83.83%), Query Frame = -1
Query:  215 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGD-RRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 916
            +F+MARLDRVKNLTGLVE Y KN+KLREL NLV+VGG     +S+D EE AE++KM+SLI+QY L+G+FRWI++QMNR RNGELYRYI DTKG FVQPA YEAFGLTVVE+MTC LPTFATC GGPAEII NG SG+HIDPYH +Q A  LV FFE C  +P++W KIS GGLKRI E+YTWK YS+RLLTL GVY FWKHVS L+R E+RRYLEMFY+LK+R LA S+PLA +E
Sbjct:  570 IFSMARLDRVKNLTGLVECYAKNSKLRELANLVIVGGYIDENQSRDREEMAEIQKMHSLIEQYDLHGEFRWIAAQMNRARNGELYRYIADTKGVFVQPAFYEAFGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVSFFETCNTNPNHWVKISEGGLKRIYERYTWKKYSERLLTLAGVYAFWKHVSKLERRETRRYLEMFYSLKFRDLANSIPLATDE 804          
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SUS2_PEA (Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 SV=1)

HSP 1 Score: 347.051 bits (889), Expect = 8.589e-95
Identity = 167/232 (71.98%), Postives = 199/232 (85.78%), Query Frame = -1
Query:  224 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRR-KESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLA 916
            +F+MARLDRVKN+TGLVE Y KN+KLRELVNLVVV G    K+S D EE  E++KM+ L+ QY LNG+FRWI++Q NR RNGELYRYI DTKGAFVQPA YEAFGLTVVEAMTCGLPTFAT  GGPAEII +G SG+HIDPYH +QA+E+LVDFF++CK DP++W+K+S GGL+RI E+YTWKIYS+RL+TL GVY FWK+VS L+R E+RRYLEMFY LK+R LA SVP+A
Sbjct:  576 IFSMARLDRVKNITGLVESYAKNSKLRELVNLVVVAGYIDVKKSSDREEIEEIEKMHDLMKQYNLNGEFRWITAQTNRARNGELYRYIADTKGAFVQPAFYEAFGLTVVEAMTCGLPTFATNHGGPAEIIEHGVSGFHIDPYHPDQASELLVDFFQRCKEDPNHWNKVSDGGLQRIYERYTWKIYSERLMTLAGVYSFWKYVSKLERRETRRYLEMFYILKFRDLANSVPIA 807          
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SUSY_BETVU (Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS1 PE=2 SV=1)

HSP 1 Score: 346.665 bits (888), Expect = 1.122e-94
Identity = 169/235 (71.91%), Postives = 196/235 (83.40%), Query Frame = -1
Query:  215 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGG-DRRKESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKYRKLAESVPLAVEE 916
            +F+MARLDRVKN+TGLVE YGKNAKLREL NLVVV G +  K+S D EE AE++KM+ LI +Y L GQFRWI+SQ NRVRNGELYRYICD  G F QPA YEAFGLTVVEAMTCGLPTFATC GGPAEII +G SG+HIDPYH +Q AE + +FF KC+ DP+YW KIS GGL RI+E+YTW+ YS+RL+TL GVYGFWK+VS L+R E+RRYLEMFY LK+R LA SVPLA +E
Sbjct:  519 IFSMARLDRVKNITGLVECYGKNAKLRELANLVVVAGYNDVKKSNDREEIAEIEKMHRLIQEYNLRGQFRWIASQTNRVRNGELYRYICDKGGIFAQPAFYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEDGVSGFHIDPYHADQ-AEKMTEFFVKCREDPNYWTKISAGGLLRIKERYTWQKYSERLMTLAGVYGFWKYVSKLERRETRRYLEMFYILKFRDLANSVPLATDE 752          
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SUSY_SACOF (Sucrose synthase (Fragment) OS=Saccharum officinarum GN=SUS1 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 4.293e-70
Identity = 139/220 (63.18%), Postives = 162/220 (73.64%), Query Frame = -1
Query:  254 ARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKD---LEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLTLTGVYGFWKHVSNLDRLESRRYLEMFYALKY 904
            ARLDRVKN+TG VE  GK A+LREL N V+V GD  KESKD    EEQ   KKMYSLID YK  G  R IS+QMNRVRNGELY+YICDTKGAFVQPA YEAF L                   P EII +G SG HIDPYH ++ A+ILV+FF+KC ADPSYWD+IS GG +RI EKYTWK+YS+RL+TLTG YGFW +VS L+R ++ RY++MFYAL+Y
Sbjct:    1 ARLDRVKNMTGPVEISGKKARLRELANPVIVAGDHGKESKDRDEAEEQGGFKKMYSLIDDYKFKGHIRLISAQMNRVRNGELYQYICDTKGAFVQPA-YEAFRLDCDRVHEVRSAKDRDLPWRPCEIIADGVSGLHIDPYHSDKDADILVNFFDKCNADPSYWDEISQGG-QRIYEKYTWKLYSERLMTLTGAYGFWNYVSKLERGDT-RYIDMFYALEY 217          
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SPS_BETVU (Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 9.697e-22
Identity = 68/191 (35.60%), Postives = 97/191 (50.79%), Query Frame = -1
Query:  347 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 916
            +  +AR D  KN+T LV+ +G+   LREL NL ++ G+R   +       + +  +  LIDQY L GQ  +      +    E+YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP+  +  A  L+    K  AD   W K    GLK I   Y+W  +S+  L+
Sbjct:  476 ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSSVLLSVLKLIDQYDLYGQVAY-PKHHKQADVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIQRVLDNGLLVDPHEQQSIATALL----KLVADKQLWTKCQQNGLKNI-HLYSWPEHSKTYLS 660          
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SPS_SPIOL (Sucrose-phosphate synthase OS=Spinacia oleracea GN=SPS1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 6.285e-21
Identity = 67/191 (35.08%), Postives = 98/191 (51.31%), Query Frame = -1
Query:  347 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 916
            +  +AR D  KNLT LV+ +G+   LREL NL ++ G+R   +       + +  +  LID+Y L GQ  +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +II    +G  IDP+  +  A+ L+    K  AD   W K    GLK I   ++W  + +  L+
Sbjct:  486 ILALARPDPKKNLTTLVKAFGECRPLRELANLTLIIGNRDDIDEMSTTSSSVLISILKLIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATKNGGPVDIIGVLDNGLLIDPHDQKSIADALL----KLVADKHLWTKCRQNGLKNI-HLFSWPEHCKNYLS 670          
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SPS_MAIZE (Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 3.119e-20
Identity = 64/191 (33.51%), Postives = 97/191 (50.79%), Query Frame = -1
Query:  347 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 916
            +  ++R D  KN+T LV+ +G+   LREL NL ++ G+R   +       + +  +  LID+Y L G   +     N+    E+YR     KG F+ PAL E FGLT++EA   GLP  AT  GGP +I     +G  +DP+     A+ L+    K  AD + W +    GL+ I   Y+W  + +  LT
Sbjct:  491 ILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDDMSAGNASVLTTVLKLIDKYDLYGSVAF-PKHHNQADVPEIYRLAAKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDITNALNNGLLVDPHDQNAIADALL----KLVADKNLWQECRRNGLRNI-HLYSWPEHCRTYLT 675          
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SPS_SOLTU (Sucrose-phosphate synthase OS=Solanum tuberosum GN=SPS PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.321e-20
Identity = 68/193 (35.23%), Postives = 97/193 (50.26%), Query Frame = -1
Query:  353 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRK-ESKDLEEQAEMKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTW----KIYSQRL 916
            +  +AR D  KNLT LV+ +G+   LR+L NL ++ G+R   +       A +  +  +ID+Y L GQ  +      +    ++YR    TKG F+ PA  E FGLT++EA   GLP  AT  GGP +I     +G  +DP H +QA   + D   K  AD   W K    GLK I   ++W    K Y  R+
Sbjct:  476 ILALARPDPKKNLTTLVKAFGECRPLRDLANLTLIMGNRDNIDEMSSTNSALLLSILKMIDKYDLYGQVAY-PKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATKNGGPVDIHRVLDNGLLVDP-HDQQA---IADALLKLVADKQLWAKCRANGLKNI-HLFSWPEHCKTYLSRI 662          
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SPS_ORYSJ (Probable sucrose-phosphate synthase OS=Oryza sativa subsp. japonica GN=SPS1 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.548e-19
Identity = 65/195 (33.33%), Postives = 101/195 (51.79%), Query Frame = -1
Query:  347 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAE-----MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 916
            +  ++R D  KN+T LV+ +G+   LREL NL+++ G+R     D++E +      +  +  LID+Y L G   +      +    E+YR     KG F+ PAL E FGLT++EA   GLP  AT  GGP +I     +G  +DP+     A+ L+    K  AD + W +    GL+ I + Y+W  + +  LT
Sbjct:  505 ILALSRPDPKKNITTLVKAFGECRPLRELANLILIMGNR----DDIDEMSAGNASVLTTVLKLIDKYDLYGSVAF-PKHHKQSDVPEIYRLTGKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPHDQHAIADALL----KLVADKNLWQECRKNGLRNI-QLYSWPEHCRTYLT 689          
BLAST of CX671416 vs. ExPASy Swiss-Prot
Match: SPS_ORYSI (Probable sucrose-phosphate synthase OS=Oryza sativa subsp. indica GN=SPS1 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.548e-19
Identity = 65/195 (33.33%), Postives = 101/195 (51.79%), Query Frame = -1
Query:  347 LFTMARLDRVKNLTGLVEWYGKNAKLRELVNLVVVGGDRRKESKDLEEQAE-----MKKMYSLIDQYKLNGQFRWISSQMNRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYHGEQAAEILVDFFEKCKADPSYWDKISLGGLKRIEEKYTWKIYSQRLLT 916
            +  ++R D  KN+T LV+ +G+   LREL NL+++ G+R     D++E +      +  +  LID+Y L G   +      +    E+YR     KG F+ PAL E FGLT++EA   GLP  AT  GGP +I     +G  +DP+     A+ L+    K  AD + W +    GL+ I + Y+W  + +  LT
Sbjct:  505 ILALSRPDPKKNITTLVKAFGECRPLRELANLILIMGNR----DDIDEMSAGNASVLTTVLKLIDKYDLYGSVAF-PKHHKQSDVPEIYRLTGKMKGVFINPALVEPFGLTLIEAAAHGLPIVATKNGGPVDIKNALNNGLLVDPHDQHAIADALL----KLVADKNLWQECRKNGLRNI-QLYSWPEHCRTYLT 689          
The following BLAST results are available for this feature:
BLAST of CX671416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SUS2_ARATH1.565e-9671.91Sucrose synthase 2 OS=Arabidopsis thaliana GN=At5g... [more]
SUS2_PEA8.589e-9571.98Sucrose synthase 2 OS=Pisum sativum GN=SUS2 PE=2 S... [more]
SUSY_BETVU1.122e-9471.91Sucrose synthase (Fragment) OS=Beta vulgaris GN=SS... [more]
SUSY_SACOF4.293e-7063.18Sucrose synthase (Fragment) OS=Saccharum officinar... [more]
SPS_BETVU9.697e-2235.60Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS... [more]
SPS_SPIOL6.285e-2135.08Sucrose-phosphate synthase OS=Spinacia oleracea GN... [more]
SPS_MAIZE3.119e-2033.51Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1... [more]
SPS_SOLTU5.321e-2035.23Sucrose-phosphate synthase OS=Solanum tuberosum GN... [more]
SPS_ORYSJ1.548e-1933.33Probable sucrose-phosphate synthase OS=Oryza sativ... [more]
SPS_ORYSI1.548e-1933.33Probable sucrose-phosphate synthase OS=Oryza sativ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10H10_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10H10-O20-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671416 ID=CX671416; Name=CX671416; organism=Citrus sinensis; type=EST; length=916bp
GCAAACTATAATGGAATTGATGAGGGTGGAACACCCAAAAGTACAAACAA
TGCTGAGAAAGCAAAAAGGCAAAAAAAAATTGGAAAAAAGAAAATTTAAC
GGGGGGAAAAAAGTCTTTGTCCAATCGCAATCCCGGAAGCGACATTATTC
TCCACAACTCAAGAAACCTCCACTCGGACCAACCACCCTGAGAGCTTCCC
TCAATGTCCATTTACTCCTCCACAGCCAGAGGAACAGATTCAGCCAGCTT
ACGGTACTTGAGAGCATAAAACATTTCAAGGTATCGACGGCTCTCAAGAC
GATCAAGGTTAGATACATGTTTCCAGAACCCATAGACTCCAGTCAGGGTC
AGAAGCCTCTGAGAGTAAATTTTCCATGTATACTTCTCTTCAATACGCTT
CAGGCCACCCAGTGATATCTTGTCCCAGTATGAGGGATCTGCCTTGCACT
TCTCAAAGAAGTCAACAAGGATCTCAGCAGCCTGCTCACCATGGTAAGGA
TCAATGTGGTAGCCAGATTTCCCGTTAACGATAATCTCAGCGGGGCCACC
CTTGCAAGTTGCAAATGTTGGCAATCCACAGGTCATGGCCTCAACAACAG
TCAAGCCAAAGGCCTCATACAGTGCAGGTTGCACAAAAGCTCCCTTTGTA
TCACAAATGTACCGGTACAATTCACCGTTCCTGACCCGATTCATCTGAGA
TGAGATCCATCGGAACTGGCCATTCAATTTGTATTGATCAATGAGGGAAT
ACATCTTCTTCATTTCAGCCTGTTCTTCCAAGTCCTTGGACTCCTTTCTC
CTATCACCACCCACTACGACTAAGTTAACCAACTCACGTAGCTTAGCATT
CTTTCCATACCACTCCACAAGCCCAGTCAAATTCTTAACACGGTCCAATC
TTGCCATTGTAAACAG
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