CX671379
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671379 vs. ExPASy Swiss-Prot
Match: RS13_METMP (30S ribosomal protein S13P OS=Methanococcus maripaludis GN=rps13p PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.688e-17 Identity = 42/127 (33.07%), Postives = 77/127 (60.63%), Query Frame = -1 Query: 240 DFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 620 +F+H +R+ T+++GK + +AL +KGIGR +A V + ++D ++AG L+ ++ ++ V+ +P IP W NR+KD G ++ L + +++D+ +KKIR ++G+RH L RGQ Sbjct: 5 EFKHRIRISKTDLEGKNPLEYALQDMKGIGRAMARAVIRVTELDPKQQAGYLADEDVLKIESVLEDPATHGIPSWMFNRKKDVYSGLDKHLIETDLVLTVQEDITNMKKIRCYKGIRHELRLPCRGQ 131
BLAST of CX671379 vs. ExPASy Swiss-Prot
Match: RS13_METMJ (30S ribosomal protein S13P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rps13p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.205e-17 Identity = 46/128 (35.94%), Postives = 75/128 (58.59%), Query Frame = -1 Query: 240 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 623 E+ ++ +RV NT++DG + + ALT IKGIG + + A VD + G+L + ++ V + ++PDW +NRQKD G ++ L M DD+ R++K+R++RG+RH G +VRGQ Sbjct: 4 EEIKYFVRVRNTDLDGTKAVHIALTGIKGIGPHTSRTITALAAVDPHAILGKLDDESVGRIANAVDTYTE-QVPDWMVNRQKDVYTGEVRHLLGTDLTMMNDDDVNRMRKMRSYRGIRHETGQKVRGQ 130
BLAST of CX671379 vs. ExPASy Swiss-Prot
Match: RS13_PYRCJ (30S ribosomal protein S13P OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rps13p PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.912e-17 Identity = 43/128 (33.59%), Postives = 80/128 (62.50%), Query Frame = -1 Query: 240 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 623 ++ + I+R+ +T++DG + + +AL I+GIG A +C+K +D + G L ++++L V N + P WFLNR+KD + GR ++ + L + + D++ +KK+++ +G+RH GL+VRGQ Sbjct: 3 QEIRAIVRIGDTDLDGNKTVAYALAKIRGIGIATAYAICRKLGIDPHATLGLLPEDQINKLDWAVRNLHELA-PAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVRGQ 129
BLAST of CX671379 vs. ExPASy Swiss-Prot
Match: RS13_METLZ (30S ribosomal protein S13P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps13p PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.415e-17 Identity = 51/151 (33.77%), Postives = 79/151 (52.32%), Query Frame = -1 Query: 186 LVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVV-ANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXVSKKR 635 +V + ++ +R++NT++DG Q + ALT IKGIG A I+ ++A VD G L ++ + V A P +P W +NR D G + + L + DD+ +KK+R +RG+RH GL+VRGQ VSK+R Sbjct: 1 MVEESELKYFVRIINTDLDGTQPVQLALTGIKGIGLHAALIIARRAGVDTRATMGLLGDEDVAAIEEQVKAYPAS--VPKWMVNRPVDVYSGEPKHLYGSDLSLAKEDDINLMKKMRCYRGIRHENGLKVRGQRTKATGRFGKIVGVSKRR 149
BLAST of CX671379 vs. ExPASy Swiss-Prot
Match: RS13_PYRAE (30S ribosomal protein S13P OS=Pyrobaculum aerophilum GN=rps13p PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.429e-16 Identity = 43/129 (33.33%), Postives = 81/129 (62.79%), Query Frame = -1 Query: 240 NEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 626 +++ + I+R+ +T++DG +++ +AL I+GIG A +C K +D + G L ++++L V N + P WFLNR+KD + GR ++ + L + + D++ +KK+++ +G+RH GL+VRGQ Sbjct: 2 SQEIRAIVRIGDTDLDGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAILGALPEDQINKLDWAVRNLHELA-PAWFLNRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGVRHSLGLKVRGQ 129
BLAST of CX671379 vs. ExPASy Swiss-Prot
Match: RS13_PYRAR (30S ribosomal protein S13P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps13p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.866e-16 Identity = 43/129 (33.33%), Postives = 81/129 (62.79%), Query Frame = -1 Query: 240 NEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 626 +++ + I+RV +T+++G +++ +AL I+GIG A +C K +D + G L ++++L V N + P WFLNR+KD + GR ++ + L + + D++ +KK+++ +G+RH GL+VRGQ Sbjct: 2 SQELRAIVRVGDTDLEGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAVLGALPEEQINKLDWAVRNLHEVA-PAWFLNRRKDPETGRDMHLIGSELVLAAKRDVDLMKKLKSWKGIRHSLGLKVRGQ 129
BLAST of CX671379 vs. ExPASy Swiss-Prot
Match: RS13_HALWD (30S ribosomal protein S13P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps13p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16 Identity = 46/129 (35.66%), Postives = 73/129 (56.59%), Query Frame = -1 Query: 240 NEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 626 ++D Q+ +R+ T++DG + + +LT +KGIG+R A I+ A VD + G L E+D + V N IP W NR++D+ G L+ K R D+ R+K I +++G+RH G +VRGQ Sbjct: 15 DDDLQYFVRIGTTDLDGTKAVERSLTDMKGIGKRTARIITDVASVDRHATFGLLEEDEIDSITDAVEN-LDDHIPGWMTNRREDFFSGDTDHKTGADLEEKRRHDVNRMKMIDSYKGVRHKRGQKVRGQ 142
BLAST of CX671379 vs. ExPASy Swiss-Prot
Match: RS13_CENSY (30S ribosomal protein S13P OS=Cenarchaeum symbiosum GN=rps13p PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.184e-16 Identity = 39/128 (30.47%), Postives = 75/128 (58.59%), Query Frame = -1 Query: 240 EDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 623 ++++HI+R+L ++ G++K + L I+GIG A + +D N G L+ ++ + ++ +P P WFLNR+KD + G + ++ ++ +R+D+ER + + +G RH +GL+VRGQ Sbjct: 49 QEYKHIVRILGNDLPGEKKAVVGLRQIRGIGYGFATAILDVLKIDNNSNIGYLTDEQVASIEKLLQDPAGAGFPTWFLNRRKDLETGEDRHIFTSDIEFTVRNDVERERVSGSWKGYRHMFGLKVRGQ 176
BLAST of CX671379 vs. ExPASy Swiss-Prot
Match: RS13_HALSA (30S ribosomal protein S13P OS=Halobacterium salinarium GN=rps13p PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.004e-15 Identity = 41/129 (31.78%), Postives = 71/129 (55.04%), Query Frame = -1 Query: 240 NEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 626 +ED Q+ +R+ T++DG + + AL + G+GRR+A IV +A VD G L ++ + V + + P W NRQ D+ G + +++ D+ R++ IR+++G+RH G +VRGQ Sbjct: 10 DEDIQYFVRIGQTDLDGTKTVERALAELGGVGRRVARIVADEAGVDRTATMGGLEDDAIESVTDAVDSFTEHA-PAWLANRQNDFYTGENQHITGTDVELTRDQDINRMRMIRSYKGIRHERGQKVRGQ 137
BLAST of CX671379 vs. ExPASy Swiss-Prot
Match: RS13_NANEQ (30S ribosomal protein S13P OS=Nanoarchaeum equitans GN=rps13p PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 40/123 (32.52%), Postives = 68/123 (55.28%), Query Frame = -1 Query: 240 ILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAELDQLMVVVANPRQFKIPDWFLNRQKDYKDGRYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQ 608 I+ + + ++DG + I L + G+ A+ VC +D ++ G LS EL++L + NP ++ IP W NR++D + G+ +V N + + D++R +I + RG RH GL VRGQ Sbjct: 13 IVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLEDALRNPWKYGIPSWLYNRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPVRGQ 135 The following BLAST results are available for this feature:
BLAST of CX671379 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671379 ID=CX671379; Name=CX671379; organism=Citrus sinensis; type=EST; length=728bpback to top |