CX671376
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.183e-20 Identity = 74/265 (27.92%), Postives = 121/265 (45.66%), Query Frame = 2 Query: 86 PIIDLSK-LNGDE--RSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGK---CMDQRFKQMVA-SKGLES--VQSEVNDLDWESTFFLRHLPVSNM----------AEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 P+IDL+ L+GD S +++ A GFF + NHG+ LL L + + K C Q+ ++ S G S V + L W+ T + P + ++ D +D+ K +E+A + ++ K+ F S +++ YP C +P+L G H D + +L QD +V GLQ+ D++W +PP H+ V+N+GD +TNG+YKS LHR + +E R + A F Sbjct: 59 PLIDLAGFLSGDSCLASEATRLVSKAATKHGFFLITNHGVDESLLSRAY-LHMDSFFKAPACEKQKAQRKWGESSGYASSFVGRFSSKLPWKETLSFKFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIF---RLNYYPQCKQPELALGTGPHCDPTSLTILHQD-QVGGLQVFVDNKWQSIPPNPHAFVVNIGDTFMALTNGRYKSCLHRAVVNSERERKTFAFF 318
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.545e-20 Identity = 73/262 (27.86%), Postives = 126/262 (48.09%), Query Frame = 2 Query: 86 PIIDLS-KLNGDERSAT--MEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQR---FKQMVASKGLESVQSE--VNDLDWESTFFLRHLPVSNMAEIPD-----LEDDYRKAMKEFA---VELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 P+ID+ L+GD R+ ++ +ACE GFF++VNHGI ELL R + + ++ ++ S G S + + L W+ T R P S+ A + D L +D+R+ + +A E+ +++ ++ F G+ +++ YPPC +P G H D + +L QD+ V GLQ+ + +W + P + V+N+GD ++NG+YKS LHR + ++ R S+A F Sbjct: 40 PLIDIGGMLSGDPRATAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCP-SDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIM---RLNYYPPCQRPMETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFF 296
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.545e-20 Identity = 72/260 (27.69%), Postives = 124/260 (47.69%), Query Frame = 2 Query: 74 MENFPIIDLSKLNGDE---RSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLESVQSEVNDL------DWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIA-QTEGNRMSIASF 823 ++ P IDL + + +E I +A WGFF+++NHG+S ELL+ ++ ++ + + + R G + + DL +W TF+ P + E DL + R M E++ ++ + K + KG +PPCP+PDL G H+D G + + D + GLQ+ ++ W DVP + +++IN+GD L++ITN K+ S+ HRV+A + R+S+A F Sbjct: 61 LKTIPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYSRDFGRKFIYLSNFDLYTAAAANWRDTFYCYMAP--DPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDMEC-LKG--LRMLCHYFPPCPEPDLTFGTSKHSD-GSFLTVLLPDNIEGLQVCREGYWFDVPHVPGALIINIGDLLQLITNDKFISLKHRVLANRATRARVSVACF 314
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.018e-20 Identity = 67/253 (26.48%), Postives = 121/253 (47.83%), Query Frame = 2 Query: 86 PIIDLSKLNGDE---RSATMEMINDACENWGFFELVNHGISHELLDTV----QRLTKEHYGKCMDQRFKQMVASKGLESVQSEVNDLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 P+IDLS L E R ++ + A + WGFF++VNHGI ++ + + ++L + + + +RF + + S + + S H+ +S ++ I D ++ R ++ + E+ +VA + +F +++ Y P + GL HTD + +L QD ++ GL+L + QW+ V P ++ +N+GD + ++NG Y+SV HRVI+ RMSIA F Sbjct: 41 PVIDLSHLTSGEEVKRKRCVKQMVAAAKEWGFFQIVNHGIPKDVFEMMLLEEKKLFDQPFSVKVRERFSDLSKNSYRWGNPSATSPAQY-SVSEAFHIILSEVSRISDDRNNLRTIVETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENS---FLRLNKYHPSVFGSEVFGLVPHTDTSFLTILSQD-QIGGLELENNGQWISVKPCLEALTVNIGDMFQALSNGVYQSVRHRVISPANIERMSIAFF 288
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.495e-20 Identity = 73/262 (27.86%), Postives = 125/262 (47.71%), Query Frame = 2 Query: 86 PIIDLS-KLNGDERSAT--MEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMV---ASKGLESVQSE--VNDLDWESTFFLRHLPVSNMAEIPD-----LEDDYRKAMKEFA---VELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 P+ID+ L+GD +A ++ +ACE GFF++VNHGI ELL R + + ++ + + S G S + + L W+ T R P S+ A + D L +D+R+ + +A E+ +++ ++ F G+ +++ YPPC +P G H D + +L QD+ V GLQ+ + +W + P + V+N+GD ++NG+YKS LHR + + R S+A F Sbjct: 40 PLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGESCGYASSFTGRFASKLPWKETLSFRSCP-SDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIM---RLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFF 296
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 7.668e-20 Identity = 71/261 (27.20%), Postives = 124/261 (47.51%), Query Frame = 2 Query: 86 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLESVQSEVN---DLDWESTFFLRHLPVSNMAEI-PDL---EDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDL-------IKGLRAHTDAGGIILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 P+ID+S + + + A ++ ACE++GFF+++NHG+S EL+ ++ T + + + + K VA S++ D+ W + S + P L +R A++E+ + K+ + ++++YPPCP + + G HTD II + + + SGLQ+ L D W+ VPP S N+GD L+V+TNG++KSV HRV+A + +R+S+ F Sbjct: 19 PVIDMS--DPESKHALVK----ACEDFGFFKVINHGVSAELVSVLEHETVDFFS--LPKSEKTQVAGYPFGYGNSKIGRNGDVGWVEYLLMNANHDSGSGPLFPSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQ-IISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCKKSRVSMIYF 270
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.308e-19 Identity = 72/262 (27.48%), Postives = 125/262 (47.71%), Query Frame = 2 Query: 86 PIIDLS-KLNGDERSAT--MEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQR---FKQMVASKGLESVQSE--VNDLDWESTFFLRHLPVSNMAEIPD-----LEDDYRKAMKEFA---VELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 P+I++ L+GD +A ++ +ACE GFF++VNHGI ELL R + + ++ ++ S G S + + L W+ T R P S+ A + D L +D+R+ + +A E+ +++ ++ F G+ +++ YPPC +P G H D + +L QD+ V GLQ+ + +W + P + V+N+GD ++NG+YKS LHR + + R S+A F Sbjct: 40 PLINIGGMLSGDAAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCP-SDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIM---RLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFF 296
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.491e-19 Identity = 69/269 (25.65%), Postives = 107/269 (39.78%), Query Frame = 2 Query: 80 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHY-----GKCMDQRFKQMVASKGLESVQSEVNDLDWESTF----------------FLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 N P IDLS + D +I +AC GFF +VNHG+S L+ RL + + GK QR L W+ T + + + DY +AM ++++ ++ + ++++YPPC PDL G H D + +L QD V+GLQ+ D+QW + P + V+N+GD ++NG +KS LHR + E R S+A F Sbjct: 62 NVPFIDLS--SQDSTLEAPRVIAEACTKHGFFLVVNHGVSESLIADAHRLMESFFDMPLAGKQKAQRKPGESCGYASSFTGRFSTKLPWKETLSFQFSNDNSGSRTVQDYFSDTLGQEFEQFGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSIM----------RLNHYPPCQTPDLTLGTGPHCDPSSLTILHQD-HVNGLQVFVDNQWQSIRPNPKAFVVNIGDTFMALSNGIFKSCLHRAVVNRESARKSMAFF 317
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.446e-18 Identity = 72/263 (27.38%), Postives = 123/263 (46.77%), Query Frame = 2 Query: 59 NKQITMEN-FPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASK-GLESVQSEVN-DLDWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDL----IKGLRAHTDAGGIILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 N IT + P++DLSK + +I ACE++GFF+++NHGI + + ++ + + ++ K A+ G + + +N D+ W L N + + D +R +K++ + +A K +V++YP CP+ + + G HTD II + + + SG Q+ L+D W+ VPP S IN+GD L+V+TNG++KSV HRV+A R+S+ F Sbjct: 18 NMPITFSSSIPLVDLSKPDAKT------LIVKACEDFGFFKVINHGIPLDAISQLESEAFKFFSLPQTEKEKAGPANPFGYGNKRIGLNGDIGWIEYLLLTTNQDHNFSLYGEDIDKFRGLLKDYKCAMRNMACEILDLMAEGLKIQPKNVFSKLVMDKQSDCLFRVNHYPACPELAINGENLIGFGEHTDPQ-IISILRSNNTSGFQISLRDGSWISVPPDHSSFFINVGDSLQVMTNGRFKSVRHRVLANGIDPRLSMIYF 273
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.221e-18 Identity = 73/265 (27.55%), Postives = 122/265 (46.04%), Query Frame = 2 Query: 86 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFK--------------QMVASKGLESVQ-SEVNDLDWESTFFLRHLPVSN--MAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNY-PPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQ--LLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIAS 820 PIIDL + ++ I AC+++G F+++NHG EL+ + KE + +++ K + A +E Q S L W+ T P+ + P+ YR+ + +++VE+ K+ K ++ ++ ++NY PPCP P G H D I LL QD + GLQ ++KD W+ V P+ + V+NLG L+VITN K++ +HRV+ +R+SIA+ Sbjct: 36 PIIDLQQ----HHHLLVQQITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGL-----KLGYFDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQD--LPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRDRVSIAT 289 The following BLAST results are available for this feature:
BLAST of CX671376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671376 ID=CX671376; Name=CX671376; organism=Citrus sinensis; type=EST; length=824bpback to top |