CX671376
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 4.207e-18 Identity = 68/257 (26.46%), Postives = 118/257 (45.91%), Query Frame = 2 Query: 86 PIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASK-GLESVQSEVN-DLDWESTFFLRHLP----VSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIK----GLRAHTDAGGIILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 P++DL+ + +I +AC ++GFF+LVNHG+ EL+ ++ + K ++ + G S + N D+ W L P ++ + +R ++ + ++ + + ++++YPPCP+ + G HTD II + + + SGLQ+ L D WV VPP + S IN+GD L+V+TNG++KSV HRV+A T +R+S+ F Sbjct: 28 PVVDLTHPDAKN------LIVNACRDFGFFKLVNHGVPLELMANLENEALRFFKKSQSEKDRAGPPDPFGYGSKRIGPNGDVGWVEYLLLNTNPDVISPKSLCIFRENPHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTDPQ-IISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTTKSRLSMIYF 277
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: GSL_ARATH (Probable 2-oxoacid dependent dioxygenase OS=Arabidopsis thaliana GN=GSL-OH PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.088e-17 Identity = 69/260 (26.54%), Postives = 121/260 (46.54%), Query Frame = 2 Query: 71 TMENFPIIDLSKLNGDE--RSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLESVQSEVNDL------DWESTFFLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQ-TEGNRMSIASF 823 T+ P IDL + R + + + DA E +GFF+ +NHG+ ++++ + + + + + R K + DL W T P ++ + DL + + M E++ E+ K+A K++ +KG +PPCP+P+ G HTD + +L D+ GLQ+L D W+DVPP +++ N+GD L++I+N K+ S+ HR++A E R+S+A F Sbjct: 51 TVVMIPTIDLGGVFESTVVRESVVAKVKDAMEKFGFFQAINHGVPLDVMEKMINGIRRFHDQDPEVRKMFYTRDKTKKLKYHSNADLYESPAASWRDTLSCVMAP--DVPKAQDLPEVCGEIMLEYSKEVMKLAELMFEILSEALGLSPNHLKEMDC-AKG--LWMLCHCFPPCPEPNRTFGGAQHTDRSFLTILLNDNN-GGLQVLYDGYWIDVPPNPEALIFNVGDFLQLISNDKFVSMEHRILANGGEEPRISVACF 304
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 6.075e-17 Identity = 71/264 (26.89%), Postives = 123/264 (46.59%), Query Frame = 2 Query: 68 ITMENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASK---GLESVQSEVN-DLDWESTFFLRHLPV----SNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPKP--DLIK-GLRAHTDAGGIILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 +T + P+++L+ R I ACE +GFF++VNHG+ EL+ +++ +G + Q K G + + N D+ W L P A +R++++E+ E+++V+ + ++++YP + ++K G HTD II + + + +GLQ+ +KD WV VPP S IN+GD L+V+TNG++KSV HRV+A T +R+S+ F Sbjct: 26 LTSHSIPVVNLADPEAKTR------IVKACEEFGFFKVVNHGVRPELMTRLEQEAIGFFG--LPQSLKNRAGPPEPYGYGNKRIGPNGDVGWIEYLLLNANPQLSSPKTSAVFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQ-IISVLRSNNTAGLQICVKDGSWVAVPPDHSSFFINVGDALQVMTNGRFKSVKHRVLADTRRSRISMIYF 280
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.768e-16 Identity = 72/274 (26.28%), Postives = 115/274 (41.97%), Query Frame = 2 Query: 74 MENFPIIDLSKLNGDERSATM---------EMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQM-----VASKGLESVQSEVNDLDWES--TFFLRHLPVSNMAEIPDLEDDYRK---AMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSN---YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKD--DQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 + + P++D S G+ + + E + A ++WG F LV HG+ +LL V+ + ++ + + G + S + W TF +L P DYR M+EF E+ +A V K T + YP CP P GL AHTD+G + Q V GLQL + D+WV VP + ++V+N+GD +++TNG++ SV HR + E +R+S+ F Sbjct: 31 LHDHPVVDGSGAGGEPDAVPVVDMRDPFAAEAVGLAAQDWGAFLLVGHGVPLDLLVRVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQS-LVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRESDRISLGYF 303
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.143e-16 Identity = 67/274 (24.45%), Postives = 115/274 (41.97%), Query Frame = 2 Query: 71 TMENFPIIDLSKL-----NGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQR--FKQMVASKGLESVQSEV-----NDLDWESTFFLRHLP--VSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXX--KKVFYGSKGPTFGT-------KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 T P++D+S +R +E + A +WG + HGI EL+D ++ + + + + A+ L+ S + +WE F P +++ A P DY A ++F +A +K + T K++ YP CP+P+L G+ AHTD + + + V GLQ+L +WV +I++++GD LE+++NG+Y SVLHR + E R+S F Sbjct: 54 TAPRIPVVDISPFLDSSSQQQQRDECVEAVRAAAADWGVMHIAGHGIPAELMDRLRAAGTAFFALPVQDKEAYANDPAAGRLQGYGSRLATNTCGQREWEDYLFHLVHPDGLADHALWPAYPPDYIAATRDFGRRTRDLASTLLAILSMGLLGTDRGDALEKALTTTTTRTAADDDLLLQLKINYYPRCPQPELAVGVEAHTDVSALSFILHNG-VPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNREAVRISWVVF 326
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: G3O22_WHEAT (Gibberellin 3-beta-dioxygenase 2-2 OS=Triticum aestivum GN=GA3ox2-2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.717e-16 Identity = 71/274 (25.91%), Postives = 113/274 (41.24%), Query Frame = 2 Query: 74 MENFPIIDLSKLNGDERSATMEMINDAC---------ENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQM-----VASKGLESVQSEVNDLDWES--TFFLRHLPVSNMAEIPDLEDDYRK---AMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSN---YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKD--DQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 + + P++D S G + + + D C ++WG F L HG+ ELL V+ + ++ + + G + S + W TF +L P DYR M+EF E+ +A V K T + YP CP P GL AHTD+G + Q V GLQL + D+WV VP + ++V+N+GD +++TNG++ SV HR + + +R+S+ F Sbjct: 31 LHDHPVVDGSGAGGGPDAVPVVDMRDPCAAEAVALAAQDWGAFLLEGHGVPLELLARVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQS-LVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYF 303
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: G3O21_WHEAT (Gibberellin 3-beta-dioxygenase 2-1 OS=Triticum aestivum GN=GA3ox2-1 PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.496e-15 Identity = 71/274 (25.91%), Postives = 113/274 (41.24%), Query Frame = 2 Query: 74 MENFPIIDLSKLNGDERSATMEMINDAC---------ENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQM-----VASKGLESVQSEVNDLDWES--TFFLRHLPVSNMAEIPDLEDDYRK---AMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSN---YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKD--DQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 + + P++D S G + + + D C ++WG F L HG+ ELL V+ + ++ + + G + S + W TF +L P DYR M+EF E+ +A V K T + YP CP P GL AHTD+G + Q V GLQL + D+WV VP + ++V+N+GD +++TNG++ SV HR + + +R+S+ F Sbjct: 31 LHDHPVVDGSGAGGGPDAVPVVDMRDPCAAEAVALAAQDWGAFLLEGHGVPLELLAGVEAAIGGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRKLWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEHKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQS-LVPGLQLFRHGPDRWVTVPAVPGAMVVNVGDLFQILTNGRFHSVYHRAVVNRDSDRISLGYF 303
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 2.553e-15 Identity = 69/259 (26.64%), Postives = 112/259 (43.24%), Query Frame = 2 Query: 80 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHY--------GKCMDQRFKQMVASKGLESVQSEVNDLDWESTFFLR-HLPVSN-MAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGS-KGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 + PIIDLS + R + +E A + GFF++VNHG+S +++ ++ + ++ + ++R K G + + W L PV + + E PD R +++F + V F G G +++YP CP PD G H D I LL V+GL++ W+ V P ++ V+N G QLEV+TNG KS+ HR + + R S+A+F Sbjct: 34 SLPIIDLSCGRDEVRRSILE----AGKELGFFQVVNHGVSKQVMRDMEGMCEQFFHLPAADKASLYSEERHKPNRLFSG--ATYDTGGEKYWRDCLRLACPFPVDDSINEWPDTPKGLRDVIEKFTSQTRDVGKELLRLLCEGMGIQADY----FEGDLSGGNVILNINHYPSCPNPDKALGQPPHCDRNLITLLLPG-AVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNSALARTSVATF 281
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.354e-15 Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 2 Query: 557 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 YPPCP+P+ G H D + +L QDD V GL++L D +W V P+ ++VIN+GD ++NG+YKS LHR + R S+A F Sbjct: 234 YPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFF 321
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.354e-15 Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 2 Query: 557 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823 YPPCP+P+ G H D + +L QDD V GL++L D +W V P+ ++VIN+GD ++NG+YKS LHR + R S+A F Sbjct: 234 YPPCPEPERTLGTGPHCDPTALTILLQDD-VGGLEVLVDGEWRPVSPVPGAMVINIGDTFMALSNGRYKSCLHRAVVNQRRERRSLAFF 321 The following BLAST results are available for this feature:
BLAST of CX671376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671376 ID=CX671376; Name=CX671376; organism=Citrus sinensis; type=EST; length=824bpback to top |