CX671376

Overview
NameCX671376
Unique NameCX671376
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.686e-15
Identity = 70/262 (26.72%), Postives = 109/262 (41.60%), Query Frame = 2
Query:   80 NFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASKGLESVQSEVNDLDWESTF-------------FLRHLPVSNMAEIPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGS-KGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823
            + PIID+S+   + R A +    D+ + +GF ++VNHGIS  +L  +  +  E +    + +      ++     +SE N L   S F              L  LP  +  + P      R+ +  +      +A                     F G   G      ++ YPP P P    GL  H D   + +L     V GL++     W+ V P+ +S+VIN G QLEV+TNG  K+V HR        R+S+ASF
Sbjct:   34 SLPIIDMSRGRDEVRQAIL----DSGKEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDK------AEFFSEDRSERNKLFCGSAFETLGEKYWIDVLELLYPLPSGDTKDWPHKPQMLREVVGNYT----SLARGVAMEILRLLCEGLGLRPDFFVGDISGGRVVVDINYYPPSPNPSRTLGLPPHCDRDLMTVLLPG-AVPGLEIAYKGGWIKVQPVPNSLVINFGLQLEVVTNGYLKAVEHRAATNFAEPRLSVASF 280          
BLAST of CX671376 vs. ExPASy Swiss-Prot
Match: G2OX2_PEA (Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum GN=GA2OX2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 9.700e-15
Identity = 72/285 (25.26%), Postives = 122/285 (42.81%), Query Frame = 2
Query:   53 LRNKQITMENFPIIDLSKLNGDERSATMEMINDACENWGFFELVNHGISHELLDTVQRLTKEHYGKCMDQRFKQMVASK-GLESVQSEVNDLDWESTFFLRHLPVSNMAE------------IPDLEDDYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXXKKVFYGSKGPTFGTKVSNYPPCPK-------PDLIK-------GLRAHTDAGGIILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASF 823
            +R K+      P IDLS     ERS   E++  ACE +GFF++VNH +  E++  +     E + K   ++ +   ++  G        N    E  + L H    +++E               + +DY KA+K+   E+ ++A                   K+       +   ++++YPP  K       P  I+       G   H+D   I+ + + + V GLQ+      W+ VPP      + +GD L+V+TNG++ SV HRV+  T   RMS+  F
Sbjct:   10 IRTKKTKAVGIPTIDLSL----ERSQLSELVVKACEEYGFFKVVNHSVPKEVISRLDEEGIEFFSKNSSEKRQAGTSTPFGYGCKNIGPNGDKGELEYLLLHSNPISISERSKTIAKDHPIKFSCIVNDYIKAVKDLTCEILELAAEGLWVPDKSSL------SKIIKDEHSDSL-LRINHYPPVKKLGNDNWDPSKIQNSNNNNIGFGEHSDPQ-ILTILRSNNVGGLQISTHHGLWIPVPPDPSEFYVMVGDALQVLTNGRFVSVRHRVLTNTTKPRMSMMYF 282          
The following BLAST results are available for this feature:
BLAST of CX671376 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
IDS2_HORVU5.686e-1526.72Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
G2OX2_PEA9.700e-1525.26Gibberellin 2-beta-dioxygenase 2 OS=Pisum sativum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10F12_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10F12-K24-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671376 ID=CX671376; Name=CX671376; organism=Citrus sinensis; type=EST; length=824bp
CCTGGCTAGAGTTTTTTAAGTGATCATAGAGTAAGAAGGGAGATTGTGGG
AGTTAAGAAACAAACAAATAACAATGGAGAATTTTCCAATTATTGACTTG
TCAAAGCTCAATGGTGATGAGAGAAGTGCTACCATGGAAATGATCAATGA
TGCCTGTGAGAACTGGGGTTTCTTTGAGTTGGTGAATCATGGGATATCAC
ATGAGCTGCTGGACACTGTTCAGAGGTTGACAAAGGAGCATTACGGGAAG
TGTATGGACCAAAGATTCAAGCAAATGGTGGCAAGCAAGGGCCTTGAATC
TGTTCAGTCCGAAGTTAATGATTTGGACTGGGAAAGCACTTTCTTCTTGC
GCCACCTTCCTGTTTCAAACATGGCTGAAATCCCCGATCTTGAAGATGAT
TACAGGAAGGCAATGAAGGAATTTGCCGTTGAATTGGAGAAGGTTGCTGA
GCAACTTCTGGAATTGTTGTGTGAGAATCTTGGGCTGGAGGAAGGGTATT
TGAAGAAAGTGTTTTATGGGTCCAAAGGACCAACCTTTGGCACCAAGGTC
AGCAATTACCCTCCATGCCCAAAACCAGATCTGATCAAGGGACTTAGGGC
CCATACTGATGCTGGTGGCATCATCTTGCTCTTTCAAGATGACGAAGTCA
GTGGCCTCCAGCTGCTCAAAGATGACCAATGGGTTGATGTTCCACCCATG
AAACACTCCATTGTCATCAACCTCGGTGACCAACTTGAGGTGATAACCAA
TGGCAAGTACAAGAGTGTGCTACATCGCGTGATTGCTCAAACAGAGGGTA
ACAGGATGTCCATAGCATCATTTT
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