CX671375

Overview
NameCX671375
Unique NameCX671375
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13382 contig Csv1_Contig13382:29..890. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671375 vs. ExPASy Swiss-Prot
Match: LDOX_VITVI (Leucoanthocyanidin dioxygenase OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.626e-18
Identity = 51/154 (33.12%), Postives = 82/154 (53.25%), Query Frame = -3
Query:  399 DYRKAMKEFAVELEKVAXXXXXXXXXXXXXXXXXLKKVFYGSKGPTFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPA 860
            DY  A  E++V+L  +A                 L+K   G +      K++ YP CP+P+L  G+ AHTD   +  +  +  V GLQL  + +WV    + +SI++++GD +E+++NGKYKS+LHR +   E  R+S A F  P  + +I  A
Sbjct:  170 DYVPATCEYSVKLRSLATKILSVLSLGLGLEEGRLEKEVGGMEELLLQKKINYYPKCPQPELALGVEAHTDVSALTFILHN-MVPGLQLFYEGKWVTAKCVPNSIIMHIGDTIEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKEKIILKA 322          
BLAST of CX671375 vs. ExPASy Swiss-Prot
Match: IDS3_HORVU (2'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vulgare GN=IDS3 PE=1 SV=3)

HSP 1 Score: 92.8189 bits (229), Expect = 2.626e-18
Identity = 51/149 (34.23%), Postives = 79/149 (53.02%), Query Frame = -3
Query:  264 VSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLYAGLKFQAKEPRFEAMKNME 710
            +++YP CP PD   G   H D   I LL     V+GL++     W+ V P  ++ V+N G QLEV+TNG  KS+ HR +  +   R S+A+F  P  + +I PA   + KE  N   Y   +F D+M++Y  +K  +       +KN++
Sbjct:  191 INHYPSCPNPDKALGQPPHCDRNLITLLLPG-AVNGLEVSYKGDWIKVDPAPNAFVVNFGQQLEVVTNGLLKSIEHRAMTNSALARTSVATFIMPTQECLIGPAKEFLSKE--NPPCYRTTMFRDFMRIYNVVKLGSSLNLTTNLKNVQ 336          
BLAST of CX671375 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.702e-17
Identity = 52/134 (38.81%), Postives = 79/134 (58.96%), Query Frame = -3
Query:  327 KVSNYPPCPKPDLIK----GLRAHTDAGGIILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMK 713
            ++++YPPCP+   +     G   HTD   II + + +  SGLQ+ L D  WV VPP + S  IN+GD L+V+TNG++KSV HRV+A T  +R+S+  F  P     I P P+++ K      +Y +F + +Y K
Sbjct:  181 RLNHYPPCPEVQALNRNLVGFGEHTDPQ-IISVLRSNSTSGLQICLTDGTWVSVPPDQTSFFINVGDALQVMTNGRFKSVKHRVLADTTKSRLSMIYFGGPALSENIAPLPSVMLKG--EECLYKEFTWCEYKK 311          
BLAST of CX671375 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.441e-16
Identity = 44/128 (34.38%), Postives = 70/128 (54.69%), Query Frame = -3
Query:  330 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYM 713
            +++ YPPC +P    G   H D   + +L QD+ V GLQ+  + +W  + P   + V+N+GD    ++NG+YKS LHR +  ++  R S+A F  P  D V+ P   LV  +A N + YP F +   +
Sbjct:  205 RLNYYPPCQRPMETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSKVPRKSLAFFLCPEMDKVVAPPGTLV--DAANPRAYPDFTWRSLL 329          
BLAST of CX671375 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.441e-16
Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = -3
Query:  333 KVSNYPPCPKPDL-------IKGLRAHTDAGGIILLFQDDEVSGLQL-LKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDY 713
            ++++YPPCP  +        + G   HTD   II + + +  SGLQ+ L D  W+ VPP   S   N+GD L+V+TNG++KSV HRV+A  + +R+S+  F  P     I P   L++ E  + ++Y +F + +Y
Sbjct:  171 RLNHYPPCPLSNKKTNGGKNVIGFGEHTDPQ-IISVLRSNNTSGLQINLNDGSWISVPPDHTSFFFNVGDSLQVMTNGRFKSVRHRVLANCKKSRVSMIYFAGPSLTQRIAPLTCLIDNE--DERLYEEFTWSEY 302          
BLAST of CX671375 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.458e-16
Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = -3
Query:  330 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYM 713
            +++ YPPC +P    G   H D   + +L QD+ V GLQ+  + +W  + P   + V+N+GD    ++NG+YKS LHR +  +   R S+A F  P  D V+ P   LV  +A N + YP F +   +
Sbjct:  205 RLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLV--DAANPRAYPDFTWRSLL 329          
BLAST of CX671375 vs. ExPASy Swiss-Prot
Match: LDOX_MAIZE (Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.210e-16
Identity = 43/110 (39.09%), Postives = 67/110 (60.91%), Query Frame = -3
Query:  387 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAV-IYPAPALV 713
            K++ YP CP+P+L  G+ AHTD   +  +  +  V GLQ+L   +WV       +I++++GD LE+++NG+Y SVLHR +   E  R+S   F  P  D+V ++P P LV
Sbjct:  235 KINYYPRCPQPELAVGVEAHTDVSALSFILHNG-VPGLQVLHGARWVTARHEPGTIIVHVGDALEILSNGRYTSVLHRGLVNREAVRISWVVFCEPPPDSVLLHPLPELV 343          
BLAST of CX671375 vs. ExPASy Swiss-Prot
Match: GAO1A_WHEAT (Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN=GA20ox1A PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.193e-16
Identity = 44/128 (34.38%), Postives = 69/128 (53.91%), Query Frame = -3
Query:  330 KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYM 713
            +++ YPPC +P    G   H D   + +L QD+ V GLQ+  + +W  + P   + V+N+GD    ++NG+YKS LHR +  +   R S+A F  P  D V+ P   LV  +A N + YP F +   +
Sbjct:  205 RLNYYPPCQRPLETLGTGPHCDPTSLTILHQDN-VGGLQVHTEGRWRSIRPRADAFVVNIGDTFMALSNGRYKSCLHRAVVNSRVPRKSLAFFLCPEMDKVVAPPGTLV--DASNPRAYPDFTWRSLL 329          
BLAST of CX671375 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.476e-16
Identity = 47/127 (37.01%), Postives = 75/127 (59.06%), Query Frame = -3
Query:  333 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQLLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIA-QTEGNRMSIASFYNPG---SDAVIYPAPALVEKEAVNSQVYPKFVFEDY 701
            YPPCP+PDL  G   H+D   + +L  D ++ GLQ+ ++  W DVP +  +++IN+GD L++ITN K+ S+ HRV+A +    R+S+A F+  G   +  +  P   LV +E  N   Y +   +DY
Sbjct:  226 YPPCPEPDLTLGTSQHSDNSFLTVLLPD-QIEGLQVRREGHWFDVPHVSGALIINIGDLLQLITNDKFISLEHRVLANRATRARVSVACFFTTGVRPNPRMYGPIRELVSEE--NPPKYRETTIKDY 349          
BLAST of CX671375 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.152e-16
Identity = 47/129 (36.43%), Postives = 71/129 (55.04%), Query Frame = -3
Query:  321 YPPCPKPDLIKGLRAHTDAGGIILLFQDDEVSGLQ--LLKDDQWVDVPPMKHSIVINLGDQLEVITNGKYKSVLHRVIAQTEGNRMSIASFYNPGSDAVIYPAPALVEKEAVNSQVYPKFVFEDYMKLY 701
            YPPCP P    G   H D   I LL QD  + GLQ  ++KD  W+ V P+  + V+NLG  L+VITN K++  +HRV+     +R+SIA+   P     I PA  L+ ++  N  +Y  + + ++  +Y
Sbjct:  202 YPPCPDPSSTLGSGGHYDGNLITLLQQD--LPGLQQLIVKDATWIAVQPIPTAFVVNLGLTLKVITNEKFEGSIHRVVTDPTRDRVSIATLIGPDYSCTIEPAKELLNQD--NPPLYKPYSYSEFADIY 326          
The following BLAST results are available for this feature:
BLAST of CX671375 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
LDOX_VITVI2.626e-1833.12Leucoanthocyanidin dioxygenase OS=Vitis vinifera P... [more]
IDS3_HORVU2.626e-1834.232'-deoxymugineic-acid 2'-dioxygenase OS=Hordeum vu... [more]
G2OX_PHACN1.702e-1738.81Gibberellin 2-beta-dioxygenase OS=Phaseolus coccin... [more]
GAO1B_WHEAT1.441e-1634.38Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
G2OX1_ARATH1.441e-1635.56Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
GAO1D_WHEAT2.458e-1634.38Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
LDOX_MAIZE3.210e-1639.09Leucoanthocyanidin dioxygenase OS=Zea mays GN=A2 P... [more]
GAO1A_WHEAT4.193e-1634.38Gibberellin 20 oxidase 1-A OS=Triticum aestivum GN... [more]
ACCH3_ARATH5.476e-1637.011-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
HY6H_HYONI7.152e-1636.43Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10F12_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10F12-K24-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671375 ID=CX671375; Name=CX671375; organism=Citrus sinensis; type=EST; length=862bp
TTTGAGGCCAATATAATCTTATATAATTTCATATGAAACAGGAGGAATAC
AGTATTCCATTTGGTCACTTTCTACAATAAATACCTGAAACACCACAACC
ACCGTCGACTTTGACTCCACAAGAACTATGATCAGTCCGAGCTTTCGGCT
TATTTTAAAAACTATATATGTTCCACACTAGCCAACACAAACAACTCAGC
TCTAACACCAAAGAGCCATAGGGGAACTCAAACAGTTGCAATAGGACCCA
GATTCACAATGGTCTCCATGTTCTTCATGGCTTCAAACCTTGGCTCCTTG
GCCTGAAACTTCAGCCCAGCATAGAGTTTCATGTAATCCTCGAACACAAA
TTTCGGATAAACTTGGCTGTTCACAGCCTCCTTCTCCACCAATGCTGGTG
CCGGGTAGATCACAGCATCACTGCCTGGATTGTAAAATGATGCTATGGAC
ATCCTGTTACCCTCTGTTTGAGCAATCACGCGATGTAGCACACTCTTGTA
CTTGCCATTGGTTATCACCTCAAGTTGGTCACCGAGGTTGATGACAATGG
AGTGTTTCATGGGTGGAACATCAACCCATTGGTCATCTTTGAGCAGCTGG
AGGCCACTGACTTCGTCATCTTGAAAGAGCAAGATGATGCCACCAGCATC
AGTATGGGCCCTAAGTCCCTTGATCAGATCTGGTTTTGGGCATGGAGGGT
AATTGCTGACCTTGGTGCCAAAGGTTGGTCCTTTGGACCCATAAAACACT
TTCTTCAAATACCCTTCCTCCAGCCCAAGATTCTCACACAACAATTCCAG
AAGTTGCTCAGCAACCTTCTCCAATTCAACGGCAAATTCCTTCATTGCCT
TCCTGTAATCAT
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