CX671374
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671374 vs. ExPASy Swiss-Prot
Match: HDA12_DICDI (Histone deacetylase B OS=Dictyostelium discoideum GN=hdaB PE=2 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 5.145e-90 Identity = 152/236 (64.41%), Postives = 191/236 (80.93%), Query Frame = 1 Query: 97 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF-GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFK 801 K +VCYF+D +VGNY+YG HPMKPHR+ +T+ L+ +YGL + M + K PA D+ +FH++DYV FL +TPE ++ + +KRF++GEDCPVF GL+ +C Y+GGS+ GA+KLNH + DIAINW+GGLHHA+K EASGFCYVNDIVLAILELLK H RVLY+DID+HHGDGV+EAFY TDRVMTVSFHKF GD+FPGTGDI +IG GK YS+NVPL DGIDD++Y +FK Sbjct: 12 KTRVCYFFDQDVGNYFYGPYHPMKPHRLCLTNNLVLNYGLHKKMHLYKARPADAEDMLKFHSEDYVDFLERVTPENI-NEWKDVKRFHIGEDCPVFPGLYDYCSIYSGGSIEGALKLNHRMYDIAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFHARVLYIDIDVHHGDGVQEAFYLTDRVMTVSFHKFGGDFFPGTGDIDEIGAKTGKLYSVNVPLADGIDDKNYLNIFK 246
BLAST of CX671374 vs. ExPASy Swiss-Prot
Match: HDA2_CAEEL (Putative histone deacetylase 2 OS=Caenorhabditis elegans GN=hda-2 PE=2 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 7.705e-78 Identity = 139/245 (56.73%), Postives = 179/245 (73.06%), Query Frame = 1 Query: 76 PSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPE---TQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFK 801 P G D KR V Y+Y +VG+++YGQ HPMKP R+ + + L+ Y + + M V++ D+ FH +DYV+FL+++TP+ T D + L++FN+GEDCP+F GL+ +C YAGGSV GA +LNH + DI INW GGLHHAKK EASGFCYVNDIVL ILELLK H+RVLY+DIDIHHGDGV+EAF +DRVMTVSFH+FG YFPG+G I D G GK++++NVPL I DE Y LF+ Sbjct: 21 PDGADVKKRNVAYYYHKDVGHFHYGQLHPMKPQRLVVCNDLVVSYEMPKYMTVVESPKLDAADISVFHTEDYVNFLQTVTPKLGLTMPDDV--LRQFNIGEDCPIFAGLWDYCTLYAGGSVEGARRLNHKMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQEAFNNSDRVMTVSFHRFGQYFPGSGSIMDKGVGPGKYFAINVPLMAAIRDEPYLKLFE 263
BLAST of CX671374 vs. ExPASy Swiss-Prot
Match: PHD1_SCHPO (Histone deacetylase phd1 OS=Schizosaccharomyces pombe GN=phd1 PE=1 SV=1) HSP 1 Score: 283.493 bits (724), Expect = 9.419e-76 Identity = 132/236 (55.93%), Postives = 172/236 (72.88%), Query Frame = 1 Query: 97 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF-GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFK 801 K++V Y D +VGNY+YG HPMKPHRI +T+ L+ YGL M V P A ++ FH +DY+ FL+ +TP+ + + ++FN+G+DCPVFDG + F Q AG S+ + KL G DIAINW+GGLHHAK+ EASGFCYVNDIVLAIL +L+ RVLY+DIDIHHGDGV++AFY +DRV+TVSFHK+ GD+FP TG+ + G GK+++LNVPL+DGI DE Y LFK Sbjct: 25 KKRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSEFHREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQGQTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAFYESDRVLTVSFHKYNGDFFPATGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFK 260
BLAST of CX671374 vs. ExPASy Swiss-Prot
Match: HOS2_YEAST (Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae GN=HOS2 PE=1 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 9.747e-73 Identity = 127/235 (54.04%), Postives = 172/235 (73.19%), Query Frame = 1 Query: 103 KVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLR-QLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKF-GDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLFK 801 +V Y ++ +V +Y+YG HPMKP R+ +T L++ YGL + M + + A +L +FH++DYV+FL ++PE R L+ FN+G+DCP+F L+ + Y G S+ KL + DIAINW+GGLHHAKK SGFCYVNDIVL+IL LL+ H R+LY+DID+HHGDGV+EAFYTTDRV T+SFHK+ G++FPGTGD+ +IG KGK ++LNVPL+DGIDD+SY LFK Sbjct: 27 RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHSEDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQSDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFK 261
BLAST of CX671374 vs. ExPASy Swiss-Prot
Match: HDA7_ARATH (Histone deacetylase 7 OS=Arabidopsis thaliana GN=HDA7 PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 6.318e-72 Identity = 140/248 (56.45%), Postives = 170/248 (68.55%), Query Frame = 1 Query: 73 LPSGTDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQ----LRQLKRFNVGEDC--PVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLF 798 + S DG KR+V YFY+P +G+YYYG P KP RIR+TH L+ Y L ++M++ P A D +FH+ +Y++FL+S+TPET D LKRFNV D PVF LF +C+ YAGGS+ A KLN DIAINWAGG+HH KK +ASGF YVND+VLAILELLK +RVLY++I HGD VEEAF TDRVMTVSFHK GD TGDI D G KG++YSLN PL DG+DD S LF Sbjct: 1 MASLADGGKRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLADASDFEKFHSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAAAKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFPHGDEVEEAFKDTDRVMTVSFHKVGD----TGDISDYGEGKGQYYSLNAPLKDGLDDFSLRGLF 244
BLAST of CX671374 vs. ExPASy Swiss-Prot
Match: HDAC8_DANRE (Histone deacetylase 8 OS=Danio rerio GN=hdac8 PE=2 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 3.976e-58 Identity = 114/235 (48.51%), Postives = 150/235 (63.83%), Query Frame = 1 Query: 100 RKVCYFYDPEVGNYYYGQGHPMK-PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYLF 798 R V Y Y PE Y K P+R M H+L+ YGLL+ M+V+KP A ++ FH D Y+ L I+ + D Q F +G DCPV +G+F + G ++ A L G CD+AINWAGG HHAKK EASG CYVND VL IL+L ++++RVLYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD+ D G KG++Y++NVP +DG+ D+ Y F Sbjct: 15 RSVVYVYSPE---YIQTCDSLSKVPNRASMVHSLIEAYGLLKYMRVVKPHVASIEEMAVFHTDSYLQHLHKISQDGDNDD-PQSADFGLGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGSCYVNDAVLGILKLREKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVTDTGLGKGRWYAVNVPFEDGVRDDRYCQTF 245
BLAST of CX671374 vs. ExPASy Swiss-Prot
Match: HDAC8_XENTR (Histone deacetylase 8 OS=Xenopus tropicalis GN=hdac8 PE=2 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.577e-57 Identity = 105/210 (50.00%), Postives = 142/210 (67.62%), Query Frame = 1 Query: 169 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYL 795 P R M H+L+ YGLL+ M+V+KP A ++ FH D Y+ L ++ E D L+ + +G DCP+ +G++ + G ++ A +L G IAINW GG HHAKK EASGFCY+ND VL IL+L ++ +RVLYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD+ DIG KG++YS+NVPL DGI DE Y+ + Sbjct: 27 PRRASMVHSLIEAYGLLKEMRVVKPKVASMEEMAAFHTDSYLQHLHKVSEEGDNDDPETLE-YGLGYDCPITEGIYDYAAAVGGATLTAAEQLMAGKTRIAINWPGGWHHAKKDEASGFCYLNDAVLGILKLREKFDRVLYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDIGLGKGRYYSVNVPLQDGIQDEKYYQI 235
BLAST of CX671374 vs. ExPASy Swiss-Prot
Match: HDAC8_RAT (Histone deacetylase 8 OS=Rattus norvegicus GN=Hdac8 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 5.741e-57 Identity = 100/210 (47.62%), Postives = 143/210 (68.10%), Query Frame = 1 Query: 169 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYL 795 P R M H+L+ Y L + M+++KP A ++ FH D Y+ L+ ++ E +D ++ + +G DCP +G+F + GG++ A L G C +AINW+GG HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+++ Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIE-YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQDGIQDEKYYHI 243
BLAST of CX671374 vs. ExPASy Swiss-Prot
Match: HDAC8_MOUSE (Histone deacetylase 8 OS=Mus musculus GN=Hdac8 PE=1 SV=2) HSP 1 Score: 221.09 bits (562), Expect = 5.741e-57 Identity = 100/210 (47.62%), Postives = 143/210 (68.10%), Query Frame = 1 Query: 169 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYL 795 P R M H+L+ Y L + M+++KP A ++ FH D Y+ L+ ++ E +D ++ + +G DCP +G+F + GG++ A L G C +AINW+GG HHAKK EASGFCY+ND VL IL L ++ +R+LYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+++ Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDHPDSIE-YGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDMSDVGLGKGRYYSVNVPIQDGIQDEKYYHI 243
BLAST of CX671374 vs. ExPASy Swiss-Prot
Match: HDAC8_HUMAN (Histone deacetylase 8 OS=Homo sapiens GN=HDAC8 PE=1 SV=2) HSP 1 Score: 220.32 bits (560), Expect = 9.793e-57 Identity = 100/210 (47.62%), Postives = 141/210 (67.14%), Query Frame = 1 Query: 169 PHRIRMTHALLAHYGLLQNMQVLKPFPARERDLCRFHADDYVSFLRSITPETQQDQLRQLKRFNVGEDCPVFDGLFSFCQTYAGGSVGGAVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAFYTTDRVMTVSFHKFG-DYFPGTGDIRDIGYSKGKFYSLNVPLDDGIDDESYHYL 795 P R M H+L+ Y L + M+++KP A ++ FH D Y+ L+ ++ E D ++ + +G DCP +G+F + G ++ A L G+C +AINW+GG HHAKK EASGFCY+ND VL IL L ++ ER+LYVD+D+HHGDGVE+AF T +VMTVS HKF +FPGTGD+ D+G KG++YS+NVP+ DGI DE Y+ + Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIE-YGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243 The following BLAST results are available for this feature:
BLAST of CX671374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671374 ID=CX671374; Name=CX671374; organism=Citrus sinensis; type=EST; length=803bpback to top |