CX671364

Overview
NameCX671364
Unique NameCX671364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length790
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2273 contig Csv1_Contig2273:458..1247. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.603e-46
Identity = 104/224 (46.43%), Postives = 151/224 (67.41%), Query Frame = 1
Query:  124 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADL--ERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDM 789
            G+P ++L   E   R  G DAQ+ N+ A + VA  +RT+LGPKGMDKML    GD+ ITNDGATIL++MD+ +  AK+MVE++++QD E GDGTT  VV+AG LL++AE+LL++ IHP  I +GY +A+  A E LE IA+  E   +D+E L +  +T++  K     +  LAEIAV+AV  VA+   ++  V+LD IK E K G  + +T+LI G+ +DK++
Sbjct:    6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIVAETIRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYALAAEKAQEILEGIAK--EVSPDDVETLKKAAVTSITGKAAEEEREYLAEIAVEAVRQVAEKVGDKYKVDLDNIKFEKKEGASVHETQLIRGVVIDKEV 225          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.399e-46
Identity = 103/224 (45.98%), Postives = 152/224 (67.86%), Query Frame = 1
Query:  124 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADL--ERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDM 789
            G P I+L+  E  SR  G +A + N++A KAV   L+++ GP+GMDKML    GD+TITNDGATIL++MD+ +  AKL+V++++ QD E  DGT   V++AG L+++AE+LL + IHP  I  G++ A   A++ +E IAQK    +ND++ L +  MT+LNSK V   +  LA+I  KAV  VA+L  +R  V+LD I++  K GG + DT++IYGI VDK++
Sbjct:   13 GIPVIILK--EGSSRTYGKEALRINIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVILAGELVKKAEELLYKEIHPTIIVSGFKKAEEQALKTIEEIAQK--VSVNDMDILKKVAMTSLNSKAVAGAREYLADIVAKAVTQVAELRGDRWYVDLDNIQIVKKHGGSINDTQIIYGIVVDKEV 232          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 9.890e-46
Identity = 102/223 (45.74%), Postives = 150/223 (67.26%), Query Frame = 1
Query:  124 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLE--RKDVNLDLIKVEGKVGGRLEDTELIYGITVDKD 786
            G+P  +L+  E   R  G DA K N+ A  A++  +R+SLGP+GMDKML    GD+ ITNDG TIL++MDV++  AK+MVE+S++QD  +GDGTT  V++AG LL+QA+ L+ + +HP  I+EGY MAS  A   ++ I+ K   G ++   L++   T+LNSK  +  K +LAEI+ +AV +VA+L   +  V+ D I+V  K GG ++DT+LI GI VDK+
Sbjct:    4 GQPIFILK--EGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTK--IGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKE 222          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: THS_PYRAB (Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.292e-45
Identity = 104/226 (46.02%), Postives = 151/226 (66.81%), Query Frame = 1
Query:  124 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKD----VNLDLIKVEGKVGGRLEDTELIYGITVDKDM 789
            G+P ++L   E   R  G DAQ+ N+ A + +A  +RT+LGPKGMDKML    GD+ ITNDGATIL++MD+ +  AK+MVE++++QD E GDGTT  VV+AG LL++AE+LL++ IHP  + +GY +A+  A E L+ IA+  E   +D E L++  MT +  K     +  LA++AV+AV  VA  E KD    V++D IK E K GG + DT+LI G+ +DK++
Sbjct:    6 GQPILIL--PEGTQRYVGRDAQRMNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIVIKGYMLAAEKAQEILDSIAK--EVKPDDEEVLLKAAMTAITGKAAEEEREYLAKLAVEAVKLVA--EEKDGKFKVDIDNIKFEKKEGGAVSDTKLIRGVVIDKEV 225          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 4.908e-45
Identity = 98/224 (43.75%), Postives = 151/224 (67.41%), Query Frame = 1
Query:  124 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADL--ERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDM 789
            G P I+L+  E  SR  G +A + N++A KAV   L+T+ GP+GMDKML    GD+TITNDGATIL++MD+ +  AKL+V++++ QD E  DGT   V+ +G L+++AE+LL + IHP  I  GY+ A  +A++ +E I+ K    +ND E L +  +T+L+SK V   +  LA+I VKA+  VA+L  ++  V+LD +++  K GG + DT+++YGI VDK++
Sbjct:   13 GIPVIILK--EGSSRTYGKEALRINIAAVKAVEEALKTTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEELLYKEIHPTIIVSGYKKAEEMAIKTIEEISTK--VSVNDTEILRKVALTSLSSKAVAGAREHLADIVVKAITQVAELRGDKWYVDLDNVQIVKKHGGSINDTQIVYGIIVDKEV 232          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: THSB_ARCFU (Thermosome subunit beta OS=Archaeoglobus fulgidus GN=thsB PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.908e-45
Identity = 101/224 (45.09%), Postives = 148/224 (66.07%), Query Frame = 1
Query:  124 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLE--RKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDM 789
            G+P ++LR  E   R  G DAQ+ N+ A + +A  +R++LGPKGMDKML    GDV ITNDG TIL+++DV++  AK+++E++++QD E+GDGTT  VV+AG LL++AE+LL++ IHP  IA GY  A+  A+E L  IA       +D E L +   T +  K       +LAEIAV AV  +A+    + +VN D IK+E + GG +E+TEL+ GI +DK++
Sbjct:    6 GQPVLILR--EGTQRTVGRDAQRMNIMAARVIAEAVRSTLGPKGMDKMLVDSLGDVVITNDGVTILKEIDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKRAEELLDQEIHPAIIANGYRYAAEKALEILNEIA--IPISKDDDEILKKIATTAMTGKGAEVAIDKLAEIAVNAVKMIAEESNGQVEVNTDYIKIEKRQGGSIEETELVDGIVLDKEV 225          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPD_KLULA (T-complex protein 1 subunit delta OS=Kluyveromyces lactis GN=CCT4 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.908e-45
Identity = 96/209 (45.93%), Postives = 149/209 (71.29%), Query Frame = 1
Query:  160 KSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKD 786
            K+R +  + +KAN+ A +AVA  +RTSLGPKGMDKM+++  GD+ I+NDG TIL+QM + + +AK++VE+S +QD E GDGTT VV+M G+LL  AEKLL +GIHP  IAE ++ A+  +VE L  ++ K    L+D E LV+   T+L+SK+V++    LA +AV  VL++A  +  +V+L+ I++  KVGG ++DTE++ G+ + ++
Sbjct:   14 KNREKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIKTSRGDIIISNDGHTILKQMAILHPVAKMLVEVSGAQDVEAGDGTTSVVIMTGALLGAAEKLLNKGIHPTIIAESFQRAAERSVEILLNMSTK--ISLDDKEALVRAASTSLSSKIVSQHSSFLAPLAVDCVLSIASHDSTNVDLNDIRLIKKVGGTIDDTEMVNGVVLTQN 220          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2)

HSP 1 Score: 181.03 bits (458), Expect = 6.411e-45
Identity = 104/224 (46.43%), Postives = 152/224 (67.86%), Query Frame = 1
Query:  124 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADL--ERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKDM 789
            G P I+L++  ++S   G +A +AN+ A +A+A+IL+T+ GPKGMDKML    GD+TITN+GATIL++MDV +  AK++V++S+ Q+ E GDGT   V+ AG LL++AEKLL+  IHP  I EGY+ A R A E +E IA+   +  +D+E L     T+LNSK V   +   AE+AV+AV  VA+   +R  V+L+ I++  K GG L DT L+ GI +DK++
Sbjct:   13 GIPVIILKEGTQRSY--GREALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGDITITNNGATILDKMDVAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGYKEALRKASEVIESIAEPVSY--DDVEKLKLIAKTSLNSKAVAEARDYFAELAVEAVRTVAERRGDRWYVDLNNIQIVKKHGGSLRDTRLVRGIVLDKEV 232          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.372e-45
Identity = 104/226 (46.02%), Postives = 150/226 (66.37%), Query Frame = 1
Query:  124 GRPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKD----VNLDLIKVEGKVGGRLEDTELIYGITVDKDM 789
            G+P ++L   E   R  G DAQ+ N+ A + +A  +RT+LGPKGMDKML    GD+ +TNDGATIL+++D+ +  AK+MVE++++QD E GDGTT  VV+AG LL +AE+LL++ IHP  I +GY +A+  A E LE IA K     +D E L++  MT++  K     K  LA++AV AV  VA  E+KD    V+LD IK E K G  +E++EL+ G+ +DK++
Sbjct:    6 GQPVVIL--PEGTQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDGATILDKIDLQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILEEIAIK--VNPDDEETLLRIAMTSITGKNAESHKELLAKLAVDAVKQVA--EKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEV 225          
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.093e-44
Identity = 94/220 (42.73%), Postives = 148/220 (67.27%), Query Frame = 1
Query:  127 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDKD 786
            +P ++L   E   R  G DAQ+ N+ AG+ +   +R++LGPKGMDKML    GD+ +TNDG TIL++M V++  AK+++E++++Q+ E+GDGTT  VV+AG LL +AE+LL++ +HP  + +GY++A + A E L+ IA   +   +D E L +  MT++  K   + K +L E+ V+AV AV D E   V+ DLIK+E K G  +++TELI G+ +DK+
Sbjct:    5 QPVVVL--PENVKRFMGRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVIKGYQLAVQKAQEVLKEIA--MDVKADDKEILHKIAMTSITGKGAEKAKEKLGEMIVEAVTAVVD-ESGKVDKDLIKIEKKEGASVDETELINGVLIDKE 219          
The following BLAST results are available for this feature:
BLAST of CX671364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 460
Match NameE-valueIdentityDescription
THS_DESSY2.603e-4646.43Thermosome subunit OS=Desulfurococcus sp. (strain ... [more]
THSB_SULTO3.399e-4645.98Thermosome subunit beta OS=Sulfolobus tokodaii GN=... [more]
THSB_THEAC9.890e-4645.74Thermosome subunit beta OS=Thermoplasma acidophilu... [more]
THS_PYRAB1.292e-4546.02Thermosome subunit OS=Pyrococcus abyssi GN=ths PE=... [more]
THSB_SULAC4.908e-4543.75Thermosome subunit beta OS=Sulfolobus acidocaldari... [more]
THSB_ARCFU4.908e-4545.09Thermosome subunit beta OS=Archaeoglobus fulgidus ... [more]
TCPD_KLULA4.908e-4545.93T-complex protein 1 subunit delta OS=Kluyveromyces... [more]
THSB_AERPE6.411e-4546.43Thermosome subunit beta OS=Aeropyrum pernix GN=ths... [more]
THSA_THEK88.372e-4546.02Thermosome subunit alpha OS=Thermococcus sp. (stra... [more]
THS_METTL1.093e-4442.73Thermosome subunit OS=Methanococcus thermolithotro... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10F06_g Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10F06-K12-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671364 ID=CX671364; Name=CX671364; organism=Citrus sinensis; type=EST; length=790bp
ACTAAGCGAAAAAAGCACTGAAAGTTCTACACTCTTCTTGTGAAGAGAAG
TGGAAGGGGGAGAGGAAGCAGCAGCTGTGAGAATCAAGGATAGGAGAAAA
TGGCGTTAGCGTTCGACGAGTTCGGTCGACCGTTCATATTATTAAGGCAG
CAAGAAGAGAAGTCCAGATTGCGCGGACTCGATGCTCAGAAAGCCAACGT
TTCGGCCGGCAAAGCAGTGGCTCGGATCCTCCGAACCTCCCTCGGACCCA
AAGGCATGGACAAGATGCTCCAAAGCCCCGACGGTGACGTCACCATTACA
AATGATGGTGCCACAATCCTGGAGCAGATGGATGTTGACAATCAAATTGC
AAAGCTGATGGTTGAATTGTCTCGGAGTCAGGACTATGAAATTGGTGATG
GTACAACTGGCGTTGTTGTTATGGCTGGTTCACTTTTAGAGCAAGCTGAG
AAGCTTTTGGAACGGGGAATTCATCCTATTCGGATTGCAGAGGGCTATGA
AATGGCTTCTAGAATAGCTGTTGAACATTTAGAACGTATAGCTCAGAAGT
TTGAGTTCGGGTTGAATGACTTGGAGCCTTTGGTTCAAACTTGCATGACT
ACTTTAAATTCGAAAATGGTGAATCGTTGCAAGCGCAGATTGGCTGAGAT
TGCTGTCAAAGCGGTTCTTGCTGTGGCAGACTTAGAGAGGAAGGATGTCA
ATTTAGATTTGATTAAAGTTGAGGGAAAAGTAGGGGGAAGGTTGGAGGAC
ACTGAGCTAATATATGGAATTACTGTTGACAAGGATATGA
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