CX671364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: CH60_GEOLS (60 kDa chaperonin OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=groL PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 41/185 (22.16%), Postives = 95/185 (51.35%), Query Frame = 1 Query: 181 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMV--NRCKRRLAEIAVKAVLAVADLERKDVNLDLIK 717 + + A + A+A ++ +LGPKG + +++ G IT DG ++ ++++++N+ A+L+ E++ GDGTT V+A ++ +Q KL+ G +P+ I G + A V L++I++ + D + + Q + N+ + + ++ + V+ V + + + +L+ ++ Sbjct: 11 EGRNAILRGVNALADAVKVTLGPKGRNVIIEKSFGSPLITKDGVSVAKEVELENKFENMGAQLVKEVASKTSDVAGDGTTTATVLAQAIYKQGSKLVAAGHNPMEIKRGIDKAVEAIVAELQKISKP----IKDHKEIAQVGTISANNDKTIGDIIAEAMEKVGKEGVITVEEAKAMETSLETVE 191
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: CH60_DINSH (60 kDa chaperonin OS=Dinoroseobacter shibae (strain DFL 12) GN=groL PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 51/206 (24.76%), Postives = 105/206 (50.97%), Query Frame = 1 Query: 178 LDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDK 783 +DA+ + +A ++ +LGPKG + +L G IT DG ++ +++++ +N A+++ E++ + E GDGTT V+A +++++ K + G++P+ + G ++A+ VE ++ A+ +ND + Q + N + +EI + +AD +K N +I VE G E T+++ G+ D+ Sbjct: 10 IDARNRMLKGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGMKSVAAGMNPMDLKRGIDLATSKVVEAIKSAARP----VNDSAEVAQVGTISANGE---------SEIGQQ----IADAMQKVGNEGVITVEENKGLETE-TDVVEGMQFDR 197
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: CH60_CLOBB (60 kDa chaperonin OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=groL PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 44/185 (23.78%), Postives = 96/185 (51.89%), Query Frame = 1 Query: 175 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIK 717 G DA+++ +A ++ +LGPKG + +L G ITNDG +I ++++ +N A+L+ E++ + GDGTT ++A +++ + K + G +P+ I G MA AVE +++I++ E G D+ + ++ + ++ + ++ + V+ + + + LD+++ Sbjct: 8 GEDARRSMQVGVDKLADTVKVTLGPKGRNVVLDKKFGSPLITNDGVSIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRNGIRMAVDKAVEEIKKISKPVE-GKEDIARV--AAISAADEEIGKLIADAMEKVGNEGVITIEESKSMGTELDVVE 189
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: CH60_CLOBA (60 kDa chaperonin OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=groL PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 44/185 (23.78%), Postives = 96/185 (51.89%), Query Frame = 1 Query: 175 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIK 717 G DA+++ +A ++ +LGPKG + +L G ITNDG +I ++++ +N A+L+ E++ + GDGTT ++A +++ + K + G +P+ I G MA AVE +++I++ E G D+ + ++ + ++ + ++ + V+ + + + LD+++ Sbjct: 8 GEDARRSMQVGVDKLADTVKVTLGPKGRNVVLDKKFGSPLITNDGVSIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRNGIRMAVDKAVEEIKKISKPVE-GKEDIARV--AAISAADEEIGKLIADAMEKVGNEGVITIEESKSMGTELDVVE 189
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: CH60_BURP8 (60 kDa chaperonin OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=groL PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 42/184 (22.83%), Postives = 95/184 (51.63%), Query Frame = 1 Query: 181 DAQKANVSAG-KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIK 717 D+ +A + G +A ++ +LGPKG + +L+ G T+T DG ++ +++++ +++ A+++ E++ GDGTT V+A S++ + K + G++P+ + G + A A+E L +I++ N V ++ + +R + ++ + V+ V D + LD+++ Sbjct: 10 DSARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEIELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVASGMNPMDLKRGIDKAVAAAIEELRKISKPCT--TNKEIAQVGAISANSDTSIGDRIAEAMDKVGKEGVITVEDGKSLQDELDVVE 191
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: CH60_ALKOO (60 kDa chaperonin OS=Alkaliphilus oremlandii (strain OhILAs) GN=groL PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 37/129 (28.68%), Postives = 74/129 (57.36%), Query Frame = 1 Query: 181 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 555 +A+++ + +A ++ +LGPKG + ++ G ITNDG TI ++++ +N A+L+ E++ + GDGTT ++A +++ + K + G +P+ + +G + A +AVE L+ +QK E Sbjct: 10 EARRSLEAGVNKLADTVKVTLGPKGRNVIIDKKFGSPLITNDGVTIAREIELEDAYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVAAGANPMILKKGIQKAVDVAVEELKNTSQKVE 138
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: CH602_SYNY3 (60 kDa chaperonin 2 OS=Synechocystis sp. (strain PCC 6803) GN=groL2 PE=1 SV=4) HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 38/130 (29.23%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 181 DAQKANVSAG-KAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDV----DNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 555 D + ++ AG A+A +R +LGPKG + +L+ G I NDG T+ +++++ +N AKL+ E++ GDGTT ++A +L+ + + + G +P+ + G E + V+ +E +A+ E Sbjct: 9 DESRRSLEAGINALADAVRITLGPKGRNVLLEKQYGAPQIVNDGITVAKEIELSNPEENAGAKLIQEVASKTKEIAGDGTTTATIIAQALVREGLRNVAAGANPVALRRGIEKVTTFLVQEIEAVAKPVE 138
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: CH601_VIBPA (60 kDa chaperonin 1 OS=Vibrio parahaemolyticus GN=groL1 PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 45/187 (24.06%), Postives = 93/187 (49.73%), Query Frame = 1 Query: 175 GLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVD----NQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNS--KMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIK 717 G DA+ + +A ++ +LGPKG + +L G TIT DG ++ +++++ N A+++ E++ + GDGTT V+A +++ + K + G++P+ + G + A AVE L+ ++ + ND + + Q + NS + N + + V+ V + + LD+++ Sbjct: 9 GNDARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFQNMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVAAAVEQLKELSVE----CNDTKAIAQVGTISANSDASVGNIIAEAMERVGRDGVITVEEGQALQDELDVVE 191
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: CH601_SYNJA (60 kDa chaperonin 1 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 45/183 (24.59%), Postives = 91/183 (49.73%), Query Frame = 1 Query: 181 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMD----VDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIK 717 +A+KA +A ++ ++GPKG + +L+ G I NDG TI ++++ ++N A+LM E++ + GDGTT ++A S++++ K + G +P+ + G E + VE + A+ E N E V T + ++ R + + V+ V + + + L++++ Sbjct: 10 EARKALEQGINQLADAVKVTIGPKGRNVLLEKKFGAPQIVNDGVTIAKEIELADPLENTGAQLMREVATKTNDVAGDGTTTATILAQSMVQEGLKNISAGANPVALRRGIEKTTAYLVEQIAAQAKPVEGRKNIAE--VATISAGNDPEVGEMIARAMDAVGRDGVITVEESKSLETQLEVVE 190
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: CH601_SACEN (60 kDa chaperonin 1 OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=groL1 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.909e-11 Identity = 39/129 (30.23%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 181 DAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQI----AKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFE 555 DA++ +A ++ +LGPKG + +L+ G TITNDG +I +++++++ A+L+ E+++ D GDGTT V+A +L+ + + + G PI + G E A+ E L + A++ E Sbjct: 10 DARRGLERGMNTLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPWEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGASPIALKRGIEKATEAIAEQLLKSAKEIE 138 The following BLAST results are available for this feature:
BLAST of CX671364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671364 ID=CX671364; Name=CX671364; organism=Citrus sinensis; type=EST; length=790bpback to top |