CX671364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPG_MACFA (T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.224e-32 Identity = 79/224 (35.27%), Postives = 130/224 (58.04%), Query Frame = 1 Query: 127 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLE--RKDVNL-DLIKVEGKVGGRLEDTELIYGITVDKDM 789 RP ++L Q ++ G Q N++A K +A I+RT LGPK M KML P G + +TNDG IL ++ V + AK M+E+SR+QD E+G GTT V+++AG +L AE LE+ +HP + Y A + L++I+ +ND + ++ +++ +K ++R IA+ AV V E RK++++ KVE GG +ED+ ++ G+ ++KD+ Sbjct: 5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGGGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKIS--IPVDINDSDMMLNIINSSITTKAISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYAKVEKIPGGIIEDSCVLRGVMINKDV 224
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPH_SCHPO (Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces pombe GN=cct7 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.128e-32 Identity = 81/222 (36.49%), Postives = 133/222 (59.91%), Query Frame = 1 Query: 130 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFG----LNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYGITVDK 783 P I+L++ + S+ RG +N++A AV +RT+LGP G DK++ G+V I+NDGATI++ +D+ + AK +V+++R+QD E+GDGTT VVV AG LL +A +E G+ I GY A+++AV ++ IA + L DL L + T +NSK++ ++ V AVL L+++D+N ++I ++ GG +ED+ L+ G+ K Sbjct: 9 PVIVLKEGTDDSQGRG--QLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDL--LTKCASTAMNSKLIRSNSTFFTKMVVDAVLT---LDQEDLNENMIGIKKVPGGAMEDSLLVKGVAFKK 223
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPG_HUMAN (T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4) HSP 1 Score: 137.117 bits (344), Expect = 1.062e-31 Identity = 78/224 (34.82%), Postives = 131/224 (58.48%), Query Frame = 1 Query: 127 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLE--RKDVNL-DLIKVEGKVGGRLEDTELIYGITVDKDM 789 RP ++L Q ++ G Q N++A K +A I+RT LGPK M KML P G + +TNDG IL ++ V + AK M+E+SR+QD E+GDGTT V+++AG +L AE LE+ +HP + Y A + L++I+ ++D + ++ +++ +K ++R IA+ AV V E RK++++ +VE GG +ED+ ++ G+ ++KD+ Sbjct: 5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKIS--IPVDISDSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDV 224
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.365e-31 Identity = 71/172 (41.28%), Postives = 113/172 (65.70%), Query Frame = 1 Query: 166 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL--EPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAV 675 R G +K NV A + A ++TSLGP G+DKML GDVTITNDGATIL+ +DV++ AK++V+L++ QD E+GDGTT VV++A +LL+ A++L+ R +HP + GY +A R A ++++ + + +N L L+ T ++SK++N +++AV A++AV Sbjct: 8 RTSGESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQ---EHMAYDVNKLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAV 176
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPA_ARATH (T-complex protein 1 subunit alpha OS=Arabidopsis thaliana GN=CCT1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.365e-31 Identity = 76/171 (44.44%), Postives = 113/171 (66.08%), Query Frame = 1 Query: 166 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHL-ERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAV 675 R G D + NV A +AV+ I++TSLGP G+DKML GDVTITNDGATIL ++V++ AK++VEL+ QD E+GDGTT VV++A LL++A L+ IHP I GY +A R + +++ E++ K E L + PL+ T+++SK+++ A + V+AVL+V Sbjct: 14 RQSGQDVRTQNVMACQAVSNIVKTSLGPVGLDKMLVDDIGDVTITNDGATILRMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMRESCKYIEEKLVTKVE-KLGKV-PLINCAKTSMSSKLISGDSDFFANLVVEAVLSV 182
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.089e-31 Identity = 74/213 (34.74%), Postives = 134/213 (62.91%), Query Frame = 1 Query: 130 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDLIKVEGKVGGRLEDTELIYG 768 P +LL++ + S+ GL +N++A A+ +RT+LGP+GMDK++ + VTI+NDGAT+++ +D+ + A+ +V++++SQD E+GDGTT VV++AG L+ A+ LE GIHP I + A +A + ++ ++ + N E L + T++NSK++ K+ +++ V AV + D +++LD+I ++ + GG L D++ I G Sbjct: 8 PIVLLKEGTDTSQ--GLPQLISNINACCAIVDTVRTTLGPRGMDKLIYQSERQVTISNDGATVMKLLDIVHPAARTLVDIAKSQDSEVGDGTTSVVILAGEFLKAAKPFLEEGIHPQIIIRAFRSACELAKQKIQELSVDIK-PENMREFLEKCASTSMNSKLIASHKQFFSKMVVDAVQLLDD----NIDLDMIGIKKESGGGLGDSQFIAG 213
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPG_BOVIN (T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.089e-31 Identity = 77/224 (34.38%), Postives = 131/224 (58.48%), Query Frame = 1 Query: 127 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLE--RKDVNL-DLIKVEGKVGGRLEDTELIYGITVDKDM 789 RP ++L Q ++ G Q N++A K +A I+RT LGPK M KML P G + +TNDG IL ++ V + AK M+E+SR+QD E+GDGTT V+++AG +L AE LE+ +HP + Y A + L++I+ ++ + ++ +++ +K+++R IA+ AV V E RK++++ +VE GG +ED+ ++ G+ ++KD+ Sbjct: 5 RPVLVLSQNTKRES--GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKIS--IPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDV 224
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPG_DROME (T-complex protein 1 subunit gamma OS=Drosophila melanogaster GN=Cctgamma PE=2 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 4.034e-31 Identity = 77/224 (34.38%), Postives = 124/224 (55.36%), Query Frame = 1 Query: 127 RPFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDLEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVADLERKDVNLDL---IKVEGKVGGRLEDTELIYGITVDKDM 789 +P ++L Q ++ G Q N+ AGKA+A ++RT LGP+ M KML P G + +TNDG IL ++ V + AK M+E++R+QD E+GDGTT V+V+AG +L AE L++ IHP I Y A V HL+ + + D + + +K + + +IA+ AV V E + +D+ KVE GG +E++ ++ G+ ++KD+ Sbjct: 6 QPILVLSQNTKRES--GRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREALEDIVGHLQS-QLSIQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTLSENGRLEVDIKRYAKVEKIPGGAIEESCVLKGVMINKDV 226
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 5.269e-31 Identity = 77/196 (39.29%), Postives = 123/196 (62.76%), Query Frame = 1 Query: 166 RLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLNDL--EPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAV------ADLERKDVNLDLIKVEGK 729 R +G D + NV+A A+A I+++SLGP+G+DKML GDVTITNDGATIL Q++V + AK++VELS+ QD E+GDGTT VV++A LL++A +L++ +HP I G+++A++ A + I + + +L E L+ T+++SK++ ++I V AV +V D + N+ +IK G+ Sbjct: 11 RDQGQDVRTNNVTAVMAIANIVKSSLGPQGLDKMLVDDVGDVTITNDGATILRQLEVQHPAAKVIVELSQLQDKEVGDGTTSVVILAAELLKRANELIKNKVHPTSIITGFKIAAKEACTY---IKEHLAISVEELGREALINAAKTSMSSKLIGPESNLFSQIVVDAVESVKMTNLMGDTKYPIKNVKIIKSHGQ 203
BLAST of CX671364 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 8.987e-31 Identity = 84/237 (35.44%), Postives = 134/237 (56.54%), Query Frame = 1 Query: 130 PFILLRQQEEKSRLRGLDAQKANVSAGKAVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILEQMDVDNQIAKLMVELSRSQDYEIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRIAEGYEMASRIAVEHLERIAQKFEFGLND-LEPLVQTCMTTLNSKMVNRCKRRLAEIAVKAVLAVA-------------DLERKDVNLDL---IKVEGKVGGRLEDTELIYGITVDKDM 789 P ++L + ++S G AQ N+ A +AVA I+R++LGP+ M KML P G + ITNDG IL ++DV + AK M+ELSR+ D E+GDGTT V+++AG +L AE + IHP I GY A + A+ E A + ++ ++ LVQ+C + +K +R + ++A+KAVL V+ D+ + + +D+ KVE GG + D ++ G+ +KD+ Sbjct: 8 PIMVLNSKTQRST--GRQAQLGNIQAARAVADIIRSTLGPRSMLKMLLDPMGGIVITNDGNCILREVDVSHPTAKSMIELSRAHDEEVGDGTTSVIILAGEMLINAEPFVRTNIHPTIIVRGYNYALQEALTICEEWALVVDVHDSERVKSLVQSC---IGAKFSSRWNDIMIDMALKAVLTVSRESRTPSFTPEANDVYAQKMEVDIKRYAKVEKIPGGEISDCAVLSGVMFNKDV 239 The following BLAST results are available for this feature:
BLAST of CX671364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 460
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671364 ID=CX671364; Name=CX671364; organism=Citrus sinensis; type=EST; length=790bpback to top |