CX671363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSB_THEK8 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 4.213e-43 Identity = 105/250 (42.00%), Postives = 149/250 (59.60%), Query Frame = -3 Query: 135 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 884 V K K+VGA +V Q G DD A H L + AVR V ++E +A ATG +IV ++LTPE LG+A LV ++ + M+++E C N +AVTI IRGG + +++E +R++ DA+ V ++++ + IV GGA EI +I+VD A G EQ AI AFA+AL IP LA N+GL PIETL V +E P G+D + DM E+ V + +Q I A + MIL+IDDVI+ S+ Sbjct: 280 VDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRK--VAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAISVDEYAKEVGGKEQLAIEAFAEALKVIPRTLAGNAGLDPIETLVKVIAAH-KEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSAKAAI-MILRIDDVIAASK 525
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2) HSP 1 Score: 174.866 bits (442), Expect = 5.502e-43 Identity = 100/247 (40.49%), Postives = 146/247 (59.11%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 ++K GA +VI Q G DD A H L + + AVR V ++E IA ATG RIV ++L PE LG A LV E+ G +D+M++IE N ++VTI +RGG + +++E +RS+HDAL V + I + IV GGGA E + + A + PG Q A+ AFA A++A+P ALA N+G PIE L +++ + N G+D + DM + V E + K + AT+V +IL+IDDVI+ Sbjct: 287 IEKIAATGANVVITQKGIDDVAQHFLAKKGILAVRRVKRSDIEKIARATGARIVTDIEDLRPEDLGYAELVEERKVG--EDKMVFIEGAKNPKSVTILLRGGFERLVDEAERSLHDALSVVADAIMDGKIVAGGGAVEAEVAKVLYEYASKLPGKTQLAVEAFARAVEALPQALAHNAGHDPIEVLVKLRSAHEKPENKWYGVDLDTGEIVDMWSRGVLEPMRVKLNALKAATEVASLILRIDDVIA 531
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 7.945e-42 Identity = 101/247 (40.89%), Postives = 144/247 (58.30%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V + + GA +V CQ G DD A + L + AVR V ++E IA A G +I+ +E+T LG+A LV E+ G ++M++IE C N +AVTI IRGG++ +++E +RS+ DA+ V + + + +V GGGA EI ++ + A G EQ A AFA AL+ IP ALAENSGL PI+ L ++ E G+D M+E+ V E L K Q I AT+V MIL+IDDVI+ Sbjct: 280 VDRLAEAGANVVFCQKGIDDLAQYYLAKAGILAVRRVKQSDIEKIAKACGAKIITDLREITSADLGEAELVEERKVG--DEKMVFIEGCKNPKAVTILIRGGSEHVVDEVERSLQDAIKVVKTALESGKVVAGGGAPEIEVALKIRDWAPTLGGREQLAAEAFASALEVIPRALAENSGLDPIDILVELRKAH-EEGKTTYGVDVFSGEVACMKERGVLEPLKVKTQAITSATEVAIMILRIDDVIA 523
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.312e-41 Identity = 98/247 (39.68%), Postives = 142/247 (57.49%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V K GA ++ CQ G DD A H L + AVR V ++E ++ ATG +V ++L E LG+AG+V E+ D M+++E C + +AVT+ IRG + +IEE R++ DA+ V I + IV GGGAAEI ++ + A+ G EQ A+RAFADAL+ +P LAEN+GL IE L ++ + NN G++ +M E V E L K Q I AT+ +M+L+IDDVI+ Sbjct: 275 VDTIKASGANVLFCQKGIDDLAQHYLAKEGILAVRRVKKSDMEKLSKATGANVVTNIKDLKAEDLGEAGIVEERKIAG--DAMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAIGVVACTIEDGKIVAGGGAAEIELAMKLRDYAEGVSGREQLAVRAFADALEVVPRTLAENAGLDAIEMLVKLRAKHAEGNNAYYGLNVFTGDVENMTENGVVEPLRVKTQAIQSATEATEMLLRIDDVIA 519
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.312e-41 Identity = 96/241 (39.83%), Postives = 140/241 (58.09%), Query Frame = -3 Query: 162 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILK 884 V K VGA +V+CQ G D+ A H L + + AVR V +LE + ATGGRIV ++LTPE LG A LV E+ G +D+M++IE C N R+V+I IRGG + +++E +RSI DAL + +R+ ++ GGGAAEI + + A R G EQ AI AFA AL+ + + L EN+GL PI+ + ++ RE+ ID +MRE+ V E + I T+ +I++ Sbjct: 264 VDKIASVGANVVVCQKGIDEVAQHFLAKKGILAVRRVKRSDLEKLERATGGRIVSNIEDLTPEDLGYAALVEERKVG--EDKMVFIEGCKNPRSVSIVIRGGLERLVDEAERSIRDALSAVADALRDGKVIPGGGAAEIELAKHIRRLATRVGGKEQLAIEAFAKALEGLAVTLVENAGLDPIDMVMKLRAAHEREDGKYLSIDLATGDLVNMREKGVIEPVSILANAIKAGTEAATIIMR 502
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 3.019e-41 Identity = 94/247 (38.06%), Postives = 146/247 (59.11%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V K GA +VICQ G D+ A H L + + AVR +LE +A ATGGR++ ELT + LG A LV E+ G +D+M+++E N ++V+I IRGG + +++ET+R++ DAL ++IR+ V GGGA EI + + A + G EQ AI A+A+A++ + M LAEN+GL PI+ L +++ E N G++ DM + V E + K I AT+ V ++L+IDD+++ Sbjct: 286 VDKIAATGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGYAALVEERKVG--EDKMVFVEGAKNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNKWYGLNLFTGNPEDMWKLGVIEPALVKMNAIKAATEAVTLVLRIDDIVA 530
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2) HSP 1 Score: 168.703 bits (426), Expect = 3.943e-41 Identity = 93/247 (37.65%), Postives = 146/247 (59.11%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V K GA +VICQ G D+ A H L + + AVR +LE +A ATGGR++ ELT + LG A LV E+ G +D+M+++E N ++V+I IRGG + +++ET+R++ DAL ++IR+ V GGGA EI + + A + G EQ AI A+A+A++ + M LAEN+GL PI+ L +++ E N G++ DM + V E + K + AT+ V ++L+IDD+++ Sbjct: 286 VDKIAATGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGYAALVEERKVG--EDKMVFVEGAKNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNKWYGLNLFTGNPEDMWKLGVIEPALVKMNAVKAATEAVTLVLRIDDIVA 530
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSA_THEAC (Thermosome subunit alpha OS=Thermoplasma acidophilum GN=thsA PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 5.150e-41 Identity = 97/247 (39.27%), Postives = 143/247 (57.89%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V+K K GA +V+CQ G DD A H L + AVR V ++E +A ATG +IV +LTP LG+A V E+ G DRM ++ C N +AV+I IRGG ++ E +R+++DA+ V + ++GGGA E ++ + A+ G EQ AI AFA AL+ IP LAEN+G+ PI TL +K + + + G+D ++ G DM+ + V + L K + A +V MIL+IDDVI+ Sbjct: 277 VEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIG--DDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKAEH-EKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIA 520
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSA_SULAC (Thermosome subunit alpha OS=Sulfolobus acidocaldarius GN=thsA PE=3 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 8.784e-41 Identity = 101/250 (40.40%), Postives = 144/250 (57.60%), Query Frame = -3 Query: 138 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDC-NDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 884 V K +GA +VICQ G DD A H L + + AVR V ++E + A G RI+ ++ TPE LG A LV E+ G D+M++IE N RAV I +RG N M ++E +RS++DAL RN++ IV GGGA E ++ + A G EQ AI FA+AL+ IPM LAE +G++PI+ L ++ + + N GID N +DM + NV E + K Q + A + ILKIDD+++ S Sbjct: 286 VDKLASIGANVVICQKGIDDVAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRIGN--DKMVFIEGAKNPRAVNILLRGSNDMALDEAERSLNDALHSLRNVLMKPMIVAGGGAVESELALRLREYARSVGGKEQLAIEKFAEALEEIPMILAETAGMEPIQALMDLRARHAK-GLVNSGIDAVNGKIADDMMKINVIEPVRVKSQVLKSAVEAATAILKIDDLVAAS 532
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.147e-40 Identity = 97/247 (39.27%), Postives = 142/247 (57.49%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V K GA +VICQ G D+ A H L + + AVR +LE +A ATGGR+V ELTP+ LG A LV E+ G +D+M+++E N +AV+I IRGG + +++ET+R++ DAL ++IR+ V GGGA E+ + + A + G EQ AI A+A AL+ + M L EN G PI+ L +++ E N GI+ DM + V E + K I AT+ +IL+IDD+I+ Sbjct: 287 VDKIAATGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDELTPQDLGYAALVEERKVG--EDKMVFVEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVELEIAKRLRKYAPQIGGKEQLAIEAYASALENLVMILIENGGYDPIDLLVKLRSAHENEANKWYGINVFTGQVEDMWKLGVIEPAVVKMNAIKAATEAATLILRIDDLIA 531 The following BLAST results are available for this feature:
BLAST of CX671363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671363 ID=CX671363; Name=CX671363; organism=Citrus sinensis; type=EST; length=886bpback to top |