CX671363

Overview
NameCX671363
Unique NameCX671363
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSB_THEK8 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.213e-43
Identity = 105/250 (42.00%), Postives = 149/250 (59.60%), Query Frame = -3
Query:  135 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 884
            V K K+VGA +V  Q G DD A H L    + AVR V   ++E +A ATG +IV   ++LTPE LG+A LV ++      + M+++E C N +AVTI IRGG + +++E +R++ DA+ V ++++ +  IV  GGA EI  +I+VD  A    G EQ AI AFA+AL  IP  LA N+GL PIETL  V     +E  P  G+D  +    DM E+ V   +   +Q I  A   + MIL+IDDVI+ S+
Sbjct:  280 VDKIKEVGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVRDLTPEDLGEAELVEQRK--VAGENMIFVEGCKNPKAVTILIRGGTEHVVDEVERALEDAVKVVKDIVEDGKIVAAGGAPEIELAISVDEYAKEVGGKEQLAIEAFAEALKVIPRTLAGNAGLDPIETLVKVIAAH-KEKGPTIGVDVFEGEPADMLERGVIAPVRVPKQAIKSAKAAI-MILRIDDVIAASK 525          
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 5.502e-43
Identity = 100/247 (40.49%), Postives = 146/247 (59.11%), Query Frame = -3
Query:  144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884
            ++K    GA +VI Q G DD A H L  + + AVR V   ++E IA ATG RIV   ++L PE LG A LV E+  G  +D+M++IE   N ++VTI +RGG + +++E +RS+HDAL V  + I +  IV GGGA E   +  +   A + PG  Q A+ AFA A++A+P ALA N+G  PIE L  +++   +  N   G+D +     DM  + V E +  K   +  AT+V  +IL+IDDVI+
Sbjct:  287 IEKIAATGANVVITQKGIDDVAQHFLAKKGILAVRRVKRSDIEKIARATGARIVTDIEDLRPEDLGYAELVEERKVG--EDKMVFIEGAKNPKSVTILLRGGFERLVDEAERSLHDALSVVADAIMDGKIVAGGGAVEAEVAKVLYEYASKLPGKTQLAVEAFARAVEALPQALAHNAGHDPIEVLVKLRSAHEKPENKWYGVDLDTGEIVDMWSRGVLEPMRVKLNALKAATEVASLILRIDDVIA 531          
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 7.945e-42
Identity = 101/247 (40.89%), Postives = 144/247 (58.30%), Query Frame = -3
Query:  144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884
            V +  + GA +V CQ G DD A + L    + AVR V   ++E IA A G +I+   +E+T   LG+A LV E+  G   ++M++IE C N +AVTI IRGG++ +++E +RS+ DA+ V +  + +  +V GGGA EI  ++ +   A    G EQ A  AFA AL+ IP ALAENSGL PI+ L  ++     E     G+D        M+E+ V E L  K Q I  AT+V  MIL+IDDVI+
Sbjct:  280 VDRLAEAGANVVFCQKGIDDLAQYYLAKAGILAVRRVKQSDIEKIAKACGAKIITDLREITSADLGEAELVEERKVG--DEKMVFIEGCKNPKAVTILIRGGSEHVVDEVERSLQDAIKVVKTALESGKVVAGGGAPEIEVALKIRDWAPTLGGREQLAAEAFASALEVIPRALAENSGLDPIDILVELRKAH-EEGKTTYGVDVFSGEVACMKERGVLEPLKVKTQAITSATEVAIMILRIDDVIA 523          
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.312e-41
Identity = 98/247 (39.68%), Postives = 142/247 (57.49%), Query Frame = -3
Query:  144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884
            V   K  GA ++ CQ G DD A H L    + AVR V   ++E ++ ATG  +V   ++L  E LG+AG+V E+      D M+++E C + +AVT+ IRG  + +IEE  R++ DA+ V    I +  IV GGGAAEI  ++ +   A+   G EQ A+RAFADAL+ +P  LAEN+GL  IE L  ++ +    NN   G++       +M E  V E L  K Q I  AT+  +M+L+IDDVI+
Sbjct:  275 VDTIKASGANVLFCQKGIDDLAQHYLAKEGILAVRRVKKSDMEKLSKATGANVVTNIKDLKAEDLGEAGIVEERKIAG--DAMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAIGVVACTIEDGKIVAGGGAAEIELAMKLRDYAEGVSGREQLAVRAFADALEVVPRTLAENAGLDAIEMLVKLRAKHAEGNNAYYGLNVFTGDVENMTENGVVEPLRVKTQAIQSATEATEMLLRIDDVIA 519          
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.312e-41
Identity = 96/241 (39.83%), Postives = 140/241 (58.09%), Query Frame = -3
Query:  162 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILK 884
            V K   VGA +V+CQ G D+ A H L  + + AVR V   +LE +  ATGGRIV   ++LTPE LG A LV E+  G  +D+M++IE C N R+V+I IRGG + +++E +RSI DAL    + +R+  ++ GGGAAEI  +  +   A R  G EQ AI AFA AL+ + + L EN+GL PI+ +  ++    RE+     ID       +MRE+ V E +      I   T+   +I++
Sbjct:  264 VDKIASVGANVVVCQKGIDEVAQHFLAKKGILAVRRVKRSDLEKLERATGGRIVSNIEDLTPEDLGYAALVEERKVG--EDKMVFIEGCKNPRSVSIVIRGGLERLVDEAERSIRDALSAVADALRDGKVIPGGGAAEIELAKHIRRLATRVGGKEQLAIEAFAKALEGLAVTLVENAGLDPIDMVMKLRAAHEREDGKYLSIDLATGDLVNMREKGVIEPVSILANAIKAGTEAATIIMR 502          
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 3.019e-41
Identity = 94/247 (38.06%), Postives = 146/247 (59.11%), Query Frame = -3
Query:  144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884
            V K    GA +VICQ G D+ A H L  + + AVR     +LE +A ATGGR++    ELT + LG A LV E+  G  +D+M+++E   N ++V+I IRGG + +++ET+R++ DAL    ++IR+   V GGGA EI  +  +   A +  G EQ AI A+A+A++ + M LAEN+GL PI+ L  +++    E N   G++       DM +  V E  + K   I  AT+ V ++L+IDD+++
Sbjct:  286 VDKIAATGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGYAALVEERKVG--EDKMVFVEGAKNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNKWYGLNLFTGNPEDMWKLGVIEPALVKMNAIKAATEAVTLVLRIDDIVA 530          
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2)

HSP 1 Score: 168.703 bits (426), Expect = 3.943e-41
Identity = 93/247 (37.65%), Postives = 146/247 (59.11%), Query Frame = -3
Query:  144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884
            V K    GA +VICQ G D+ A H L  + + AVR     +LE +A ATGGR++    ELT + LG A LV E+  G  +D+M+++E   N ++V+I IRGG + +++ET+R++ DAL    ++IR+   V GGGA EI  +  +   A +  G EQ AI A+A+A++ + M LAEN+GL PI+ L  +++    E N   G++       DM +  V E  + K   +  AT+ V ++L+IDD+++
Sbjct:  286 VDKIAATGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVISNIDELTSQDLGYAALVEERKVG--EDKMVFVEGAKNPKSVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVEIEIAKRLRKYAPQVGGKEQLAIEAYANAIEGLIMILAENAGLDPIDKLMQLRSLHENETNKWYGLNLFTGNPEDMWKLGVIEPALVKMNAVKAATEAVTLVLRIDDIVA 530          
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSA_THEAC (Thermosome subunit alpha OS=Thermoplasma acidophilum GN=thsA PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.150e-41
Identity = 97/247 (39.27%), Postives = 143/247 (57.89%), Query Frame = -3
Query:  144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884
            V+K K  GA +V+CQ G DD A H L    + AVR V   ++E +A ATG +IV    +LTP  LG+A  V E+  G   DRM ++  C N +AV+I IRGG   ++ E +R+++DA+ V      +   ++GGGA E   ++ +   A+   G EQ AI AFA AL+ IP  LAEN+G+ PI TL  +K +   +   + G+D ++ G  DM+ + V + L  K   +  A +V  MIL+IDDVI+
Sbjct:  277 VEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIG--DDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKAEH-EKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIA 520          
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSA_SULAC (Thermosome subunit alpha OS=Sulfolobus acidocaldarius GN=thsA PE=3 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 8.784e-41
Identity = 101/250 (40.40%), Postives = 144/250 (57.60%), Query Frame = -3
Query:  138 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDC-NDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPS 884
            V K   +GA +VICQ G DD A H L  + + AVR V   ++E +  A G RI+   ++ TPE LG A LV E+  G   D+M++IE   N RAV I +RG N M ++E +RS++DAL   RN++    IV GGGA E   ++ +   A    G EQ AI  FA+AL+ IPM LAE +G++PI+ L  ++ +  +    N GID  N    +DM + NV E +  K Q +  A +    ILKIDD+++ S
Sbjct:  286 VDKLASIGANVVICQKGIDDVAQHFLAKKGILAVRRVKRSDIEKLEKALGARIISSIKDATPEDLGYAELVEERRIGN--DKMVFIEGAKNPRAVNILLRGSNDMALDEAERSLNDALHSLRNVLMKPMIVAGGGAVESELALRLREYARSVGGKEQLAIEKFAEALEEIPMILAETAGMEPIQALMDLRARHAK-GLVNSGIDAVNGKIADDMMKINVIEPVRVKSQVLKSAVEAATAILKIDDLVAAS 532          
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.147e-40
Identity = 97/247 (39.27%), Postives = 142/247 (57.49%), Query Frame = -3
Query:  144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884
            V K    GA +VICQ G D+ A H L  + + AVR     +LE +A ATGGR+V    ELTP+ LG A LV E+  G  +D+M+++E   N +AV+I IRGG + +++ET+R++ DAL    ++IR+   V GGGA E+  +  +   A +  G EQ AI A+A AL+ + M L EN G  PI+ L  +++    E N   GI+       DM +  V E  + K   I  AT+   +IL+IDD+I+
Sbjct:  287 VDKIAATGANVVICQKGIDEVAQHYLAKKGILAVRRAKKSDLEKLARATGGRVVSNIDELTPQDLGYAALVEERKVG--EDKMVFVEGAKNPKAVSILIRGGLERVVDETERALRDALGTVADVIRDGRAVAGGGAVELEIAKRLRKYAPQIGGKEQLAIEAYASALENLVMILIENGGYDPIDLLVKLRSAHENEANKWYGINVFTGQVEDMWKLGVIEPAVVKMNAIKAATEAATLILRIDDLIA 531          
The following BLAST results are available for this feature:
BLAST of CX671363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
THSB_THEK84.213e-4342.00Thermosome subunit beta OS=Thermococcus sp. (strai... [more]
THSB_AERPE5.502e-4340.49Thermosome subunit beta OS=Aeropyrum pernix GN=ths... [more]
THSA_ARCFU7.945e-4240.89Thermosome subunit alpha OS=Archaeoglobus fulgidus... [more]
THS_METTL2.312e-4139.68Thermosome subunit OS=Methanococcus thermolithotro... [more]
THSB_DESMO2.312e-4139.83Thermosome subunit beta (Fragment) OS=Desulfurococ... [more]
THSB_SULSH3.019e-4138.06Thermosome subunit beta OS=Sulfolobus shibatae GN=... [more]
THSB_SULSO3.943e-4137.65Thermosome subunit beta OS=Sulfolobus solfataricus... [more]
THSA_THEAC5.150e-4139.27Thermosome subunit alpha OS=Thermoplasma acidophil... [more]
THSA_SULAC8.784e-4140.40Thermosome subunit alpha OS=Sulfolobus acidocaldar... [more]
THSB_SULTO1.147e-4039.27Thermosome subunit beta OS=Sulfolobus tokodaii GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS10_10F06_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10F06-K12-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671363 ID=CX671363; Name=CX671363; organism=Citrus sinensis; type=EST; length=886bp
AAAAACCAACCCATAACCATTAAAGTCAGTCGTTATCAAGTGGACAGGGT
CGATACCAAGCCAACAAAATACATGAAACGCATTCTTGGTGAAGCAAAAT
CAAACAGAAACTTAGACCTTAGAATGAATCAATATTCAGAGGGGGAAATG
ACATCATCAATTTTCAAAATCATCTTCACAACTTGTGTTGCGAGAAGAAT
CTGCTGCTGCTTCCCAATCAAAGTCTCAAAGACATTTTGCTCACGCATGT
CATTGGTTCCAACATCATTGCAGTCTATTCCGCAGTTTGGATTATTCTCC
CTAATTTGCTGATTTTTCACAGCCGATAGCGTCTCAATAGGTTGGAGACC
ACTATTTTCTGCAAGTGCCATTGGGATAGCATCCAACGCATCTGCAAATG
CCCTGATAGCATACTGTTCAACTCCCGGATATCTATCTGCAGCTGCATCT
ACAGCAATTGAGCAAGCTATCTCAGCTGCACCCCCGCCATACACAATAGA
ATTGTTGCGAATCAGATTCCTAGCCACACACAAGGCATCATGTATGCTCC
GCTTGGTCTCCTCTATCATCATTTTGTTACCTCCACGGATAAAAATGGTT
ACAGCCCTAGAATTTGCACAGTGTTCAATGTACAGCATTCTATCTTGTGT
AGTACCAAAAGACTTTTCTCGAACCAAACCAGCCTTTCCAAGTTTTTCTG
GTGTCAACTCCTGAAACCTTGGAACAATTCTTCCACCTGTGGCTATGGCA
ATCAGCTCCAATTCTACACCACCAACCCAGCGGACAGCAGGCAGGTTCCT
GTGCATTAATAAGTGATTAGCCTCATCATCGAAACCCCATTGACAGATGA
CCAAGGTAGCACCAACATCCTTGCACTTTTGAACCA
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