CX671363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 4.511e-37 Identity = 93/250 (37.20%), Postives = 141/250 (56.40%), Query Frame = -3 Query: 135 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 884 V + +VGA V G DD A H L + AVR +L+ +A ATGGR+V ++ + LG AG V +K G D +++E ++++VT+ +RGG + +++E +R+I D+L V R + + ++ GGGA E S+ + AD G EQ A+ AFA+ALD IP LAEN+GL PI++L ++++ G+D DM E+ V E L K Q I AT+ MIL+IDDVI+ + Sbjct: 278 VDQLVEVGADAVFVGDGIDDMAQHYLAKEGILAVRRAKSSDLKRLARATGGRVVSSLDDIEADDLGFAGSVGQKDVGG--DERIFVEDVEDAKSVTLILRGGTEHVVDELERAIEDSLGVVRTTLEDGKVLPGGGAPETELSLQLREFADSVGGREQLAVEAFAEALDIIPRTLAENAGLDPIDSLVDLRSRH-DGGEFAAGLDAYTGEVIDMEEEGVVEPLRVKTQAIESATEAAVMILRIDDVIAAGD 524
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSA_THEK8 (Thermosome subunit alpha OS=Thermococcus sp. (strain KS-8) GN=thsA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.313e-36 Identity = 96/247 (38.87%), Postives = 140/247 (56.68%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V GA +V Q G DD A H L + AVR V ++E +A ATG +IV ++LTPE LG A +V E+ + M+++E C N +AVTI IRGG + +I+E +R++ DA+ V ++++ + +++ GGA EI +I+VD A + G E AI FADAL IP LAEN+GL +E L V ++ + GID DM E+ + L +Q I A + MIL+IDDVI+ Sbjct: 280 VDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEKLAKATGAKIVTNVKDLTPEDLGYAEIVEERKLAG--ENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAISVDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEILVKVISEH-KNKGLGIGIDVFAGEPADMLERGIIAPLRVTKQAIKSARAAI-MILRIDDVIA 522
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36 Identity = 88/253 (34.78%), Postives = 142/253 (56.13%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGF-----DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V++ K G +++ Q D A H L + V+ + ++E I G + V + TP+ LG A L E S + ++ I C + + VTI +RG NK++IEE +RSIHDALCV R L++ +++ GGGA EI ++ + + G+E Y +RAFADA++ IP LAEN+GL PI T++ ++N+ + GI+ G +++ E+ V + L+ + LAT+ V+ ILKIDDV++ Sbjct: 287 VKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGTKPVAHIDQFTPDMLGSAELAEEVSLNGS-GKLFKITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRH-AQGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 2.239e-36 Identity = 89/253 (35.18%), Postives = 143/253 (56.52%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGF-----DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V++ K G +++ Q D A H L + V+ + ++E I G + V + T + LG A L E S + +++ I CA+ + VTI +RG NK++IEE +RSIHDALCV R L++ +++ GGGA EI ++ + + G+E Y IRAFADA++ IP LAEN+GL PI T++ ++N+ + GI+ G +++ E+ V + L+ + LAT+ V+ ILKIDDV++ Sbjct: 290 VKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGTKPVAHVDQFTADMLGSAELAEEVSLNGS-GKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRH-AQGEKTTGINVRKGGISNILEEQVVQPLLVSVSALTLATETVRSILKIDDVVN 540
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 6.514e-36 Identity = 87/253 (34.39%), Postives = 143/253 (56.52%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGF-----DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V++ K G +++ Q D A H L + ++ + ++E I G + V + T + LG A L E + + ++L I CA+ + VTI +RG NK++IEE +RSIHDALCV R L++ +++ GGGA EI ++ + + G+E Y +RAFADA++ IP LAEN+GL PI T++ ++N+ + GI+ G +++ E+ V + L+ + LAT+ V+ ILKIDDV++ Sbjct: 287 VKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVIKDIEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVNLNGS-GKLLKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRH-AQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 151.369 bits (381), Expect = 6.514e-36 Identity = 87/253 (34.39%), Postives = 143/253 (56.52%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGF-----DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V++ K G +++ Q D A H L + ++ + ++E I G + V + T + LG A L E + + ++L I CA+ + VTI +RG NK++IEE +RSIHDALCV R L++ +++ GGGA EI ++ + + G+E Y +RAFADA++ IP LAEN+GL PI T++ ++N+ + GI+ G +++ E+ V + L+ + LAT+ V+ ILKIDDV++ Sbjct: 287 VKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVIKDIEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVNLNGS-GKLLKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRH-AQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 1.451e-35 Identity = 88/253 (34.78%), Postives = 141/253 (55.73%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGF-----DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V++ K G +++ Q D A H L + V+ V ++E I G + V + T + LG A L E S + ++ I C + + VTI +RG NK++IEE +RSIHDALCV R L++ +++ GGGA EI ++ + + G+E Y +RAFADA++ IP LAEN+GL PI T++ ++N+ + GI+ G +++ E+ V + L+ + LAT+ V+ ILKIDDV++ Sbjct: 287 VKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDVEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVSLNGS-GKLFKITGCTSPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRH-AQGEKTTGINVRKGGISNILEEMVVQPLLVSVSALTLATETVRSILKIDDVVN 537
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 3.233e-35 Identity = 87/253 (34.39%), Postives = 143/253 (56.52%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGF-----DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V++ K G ++ Q D A H L + V+ + ++E I G + + TPE LG A L E S + +++ I CA+ + V+I +RG NK++IEE +RSIHDALCV R L++ +++ GGGA EI ++ + + G+E Y +RA++DAL+ IP LAEN+GL PI T++ ++N+ + + GI+ G +++ E+ V + L+ + LAT+ V+ ILKIDDV++ Sbjct: 284 VKQIKKAGCNVLFIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGTKPIAHIDHFTPEMLGTAELAEEVSLDGS-GKLVKITGCASPGKTVSIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELAVRLAEYSRTLGGMEAYCVRAYSDALEVIPSTLAENAGLNPISTVTELRNRH-AQGDKMAGINVRKGGISNIMEELVVQPLLVSISALTLATETVRSILKIDDVVN 534
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.229e-34 Identity = 91/247 (36.84%), Postives = 136/247 (55.06%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V K K VGA +VI Q G DD A H L + AVR V +++ +A ATG IV E++ LG A V + G +D M ++ C N +AV+I +RG + +++E +RSI D+L V + + + + GGGA + + + A + G +Q AI FADA++ IP ALAEN+GL PI+ L ++ + + N GI+ DM + V E + +Q I AT+ MIL+IDDVI+ Sbjct: 278 VDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDKLAKATGASIVSTIDEISSSDLGTAERVEQVKVG--EDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAK-GNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIA 521
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSA_HALSA (Thermosome subunit alpha OS=Halobacterium salinarium GN=thsA PE=3 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 1.229e-34 Identity = 87/250 (34.80%), Postives = 134/250 (53.60%), Query Frame = -3 Query: 135 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 884 V KD GA +V G DD A H L + AVR + ++ ATG V ++ LG AG V +K G D +++E +++VT+ +RGG + +++E +R+I D+L V R + + ++ GGGA E ++ + AD G EQ A+ AFADAL+ IP LAEN+G PI++L +++Q + G+D + DM + + E L K Q I AT+ MIL+IDDVI+ + Sbjct: 277 VDALKDAGANVVFADSGIDDMAQHYLAKEGILAVRRAKSDDFTRLSRATGATPVSNVNDIEAADLGAAGSVAQKDIGG--DERIFVEDVEEAKSVTLILRGGTEHVVDEVERAIEDSLGVVRVTLEDGQVMPGGGAPETELAMQLRDFADSVGGREQLAVEAFADALEVIPRTLAENAGHDPIDSLVDLRSQH-DGGDTEAGLDAYNGDVIDMESEGIVEPLRVKTQAIESATEAATMILRIDDVIAAGD 523 The following BLAST results are available for this feature:
BLAST of CX671363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CX671363 ID=CX671363; Name=CX671363; organism=Citrus sinensis; type=EST; length=886bpback to top |