CX671363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPG_XENLA (T-complex protein 1 subunit gamma OS=Xenopus laevis GN=cct3 PE=2 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 2.398e-30 Identity = 84/250 (33.60%), Postives = 133/250 (53.20%), Query Frame = -3 Query: 144 QKCKDV---GATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGK-AGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 881 Q C+D+ +VI + G D A H L+ N+ AVR V + IA A G RI R EL E +G AGL K G + +I C + +A TI +RG +K ++ E +R++ DA+ V RN++ + +V GGGA+E++ + + + GVEQ+ RA A AL+ IP L +N G I L++++ + +E G+D DM+E ++E L K Q A + ++L+IDD++S Sbjct: 276 QVCEDIIRLKPDVVITEKGISDLAQHYLVKANITAVRRVRKTDNNRIARACGARIASRTDELREEDVGTGAGLFEIKKIG--DEYFTFITDCKDPKACTIVLRGASKEILAEVERNLQDAMQVCRNVVIDPYLVPGGGASEMSVAHILTEKSKTMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRILTSLRAKHTQEGCQTWGVDGEAGVLADMKELGIWEPLAVKLQTYKTAVETAILLLRIDDIVS 523
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSG_SULSH (Thermosome subunit gamma OS=Sulfolobus shibatae GN=thsC PE=3 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.976e-30 Identity = 86/248 (34.68%), Postives = 138/248 (55.65%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTND-MREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V K K +G L I Q D+ A++L+ + A++ V ++EL++ ATG +I ++ LG+A LV ++ G +++ L+I+ ++AVT+ I+G N M+ +E +RS++DA RNL+ IV GGGA E + + A + PG EQ A AFADAL+ L+E +G+ PI L+ ++++ N GID D M E V ++L K+Q + AT+ ILKIDD+I+ Sbjct: 274 VDKIKAMGVKLFITQKDIDEVASYLMGKSGIIALKNVKRSDIELLSRATGAKIASSMKDANESDLGEAKLVEVRNLG--KNKYLFIQS-DKAKAVTVIIKGSNNMVTDEAERSLNDAFNSIRNLLLEPYIVAGGGAVEEELAKRLRENAGKVPGKEQLAFNAFADALEEYVSILSETAGMDPISALTEIRHKH-ANGLKNAGIDIVKARIYDNMLELKVIDSLKVKEQVLKSATEAATAILKIDDMIA 517
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.976e-30 Identity = 79/226 (34.96%), Postives = 123/226 (54.42%), Query Frame = -3 Query: 147 ANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCAN-SRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 821 A H L + ++ + ++E + G R V + LG A LV E G +++ + N AV+I +RG NK+++EE RSIHDALCV R L++ +++ GGGA E+ ++ + A G QY RAFADAL+ IP LAEN+GL PI T++ ++N N + G++ DM E++V + L+ I A++ V+ ILKIDD++ Sbjct: 313 ALHFLAKMKIMCIKDIEREDIEFYSRILGCRPVASVDHFNADALGYADLVEEIPTGG-DGKVIKVTGVQNPGHAVSILLRGSNKLVLEEADRSIHDALCVIRCLVKKKALLPGGGAPEMEIAVKLRNLAQTQHGATQYCWRAFADALELIPYTLAENAGLSPIHTVTELRNNH-ANGNSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSILKIDDIV 536
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 9.111e-30 Identity = 81/244 (33.20%), Postives = 132/244 (54.10%), Query Frame = -3 Query: 150 KCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVRE-KSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDV 878 KC + I + +D A H L N+ V+ + E+E ++ G + + + T ++LG A LV E S G+ R+ I + V++ IRG N M+I+ET+RS+HDALCV R L++ ++ GGGA EI S + A GV+ + + FA AL+ IP LAEN+GL I+ ++ ++++ N GI GT + E+++ + ++ I LA++ VK IL+IDD+ Sbjct: 282 KCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREEIEFLSKGLGCKPIADIELFTEDRLGSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKH-ENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDI 524
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPG_YEAST (T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae GN=CCT3 PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 1.190e-29 Identity = 79/242 (32.64%), Postives = 133/242 (54.96%), Query Frame = -3 Query: 144 VGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLG-KAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 866 V TLVI + G D A H L+ +R V + IA TG IV R ++L +G GL + + G + ++++C +A TI +RGG+K ++ E R++ DA+ VARN++ + S+ GGGA E+A S+ + A + G++Q+ +A ADA++ IP L +N+G PI LS ++ + + N GID + DM ++E + KQQ + A + ++L++DD++S Sbjct: 290 VRPTLVITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIG--DEYFSFLDNCKEPKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKH-AQGNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVS 528
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.190e-29 Identity = 78/244 (31.97%), Postives = 133/244 (54.51%), Query Frame = -3 Query: 150 KCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVRE-KSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDV 878 KC + I + +D A H L + ++ + E+E ++ + G + + + T ++LG A LV E S GT + ++ V++ IRG N M+++ET+RS+HDALCV R L++ ++ GGGA EI S ++ + GVE Y + FA AL+ IP LAEN+GL I+ ++ ++++ + N GI GT + E+++ + ++ I LA++ VK IL+IDD+ Sbjct: 283 KCNVLLIQKSILRDAVNDLALHFLAKLGIMVIKDIEREEIEFLSKSLGCKPISDVELFTEDRLGSADLVEEIDSDGTKIVKFSGVKGVNAKPTVSVIIRGANSMILDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLERESRSMEGVEAYIWQEFAQALEVIPTTLAENAGLNSIKVITELRSRH-ENGDVNEGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDI 525
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.554e-29 Identity = 74/251 (29.48%), Postives = 127/251 (50.60%), Query Frame = -3 Query: 135 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIE-HCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 884 VQ+ D GA +V CQ G DD A H L + AVR ++E + +V + + + R+ + D + Y+E + VT+ +RG +++E +R + DAL V+ + + ++ GGGA E+ + + AD G EQ A+ AFAD+L+ +P LAEN+GL I+TL +++ +++ + G++ D E V E K+Q + A++ ++LKIDD+IS + Sbjct: 284 VQQIADTGANVVFCQKGIDDMAQHYLAKEGILAVRRTKKSDIEFLTNVLDASVVTDLDAASEADVVAGSVTRD-----SDDELFYVEGESEQAHGVTLLLRGSTDHVVDELERGVSDALDVSAQTLSDGRVLPGGGATEVEVASRLRDFADSVSGREQLAVEAFADSLELVPRVLAENAGLDSIDTLVDLRSAHENDDDEHIGLNVLSGDLEDTFEAGVVEPAHAKEQAVTSASEAANLVLKIDDIISAGD 529
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPG_OXYGR (T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.462e-29 Identity = 79/240 (32.92%), Postives = 130/240 (54.17%), Query Frame = -3 Query: 144 LVICQWGFDDEANH-LLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLG-KAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNP-NCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 854 +VI + G D A H LL + N +R + + IA TG I R +EL +G K GL K G + ++ C N +A +I +RG +K ++ E +R++HDAL VARN++ N +V GGGA E+ + + + + G++Q+ +A A AL+ IP LA+N G + ++ ++ + + GID N DMRE NV++ + KQQ + + + M+L+IDD++S Sbjct: 290 VVITEKGVSDTAQHFLLKYGNCTVIRRIRKTDNNRIARVTGATIANRPEELQESDVGTKCGLFEIKKIG--DEYFSFMTKCENPKACSILLRGASKDVLNEIERNLHDALGVARNVMVNPKLVPGGGAIEMELACRLMEFSQKIEGMQQWPFKALAGALEVIPRTLAQNCGADVVRVMTELRAKHANDKEGLYWGIDGNTGKIRDMRESNVWDPISVKQQTLKTSIEATCMLLRIDDIVS 527
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 4.522e-29 Identity = 79/250 (31.60%), Postives = 137/250 (54.80%), Query Frame = -3 Query: 150 QKCKDVGATLVICQWGF-----DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANS-RAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDV 881 +K K GA +++ Q +D A H L + ++ + E+E I +TG + + + +KLG A LV E S ++ ++++ N+ + V+I RG N + +EE +RS+HDALCV R L++ +++ GGG+ EI + + A + G E IRAF++AL+ IP+ LAEN+GL I+ ++ ++++ GI+ ++ E+NV + L+ I LA + KMI+KIDD+ Sbjct: 277 KKIKKAGANVILIQKSILRDAVNDLALHFLAKLKIMVIKDIERDEVEFICKSTGCKPIADIESFAEDKLGHADLVEETS--SSGEKIVKFSGVKNAGKTVSILCRGANLLTLEEAERSLHDALCVIRCLVKQRALIAGGGSPEIEAAQRLLEHARQLEGREAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRH-ANGEKTAGINVRKGIVTNILEENVLQPLLVNISAIQLAAETTKMIMKIDDI 523
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.713e-29 Identity = 85/248 (34.27%), Postives = 137/248 (55.24%), Query Frame = -3 Query: 144 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTND-MREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 884 V K K +G L I Q D+ A++L+ + A++ V ++EL++ ATG +I ++ LG+A LV ++ G +++ L+I+ ++AVT+ I+G N M+ +E +RS++DA RNL+ IV GGGA E + + A + G EQ A AFADAL+ L+E +G+ PI L+ ++++ N GID D M E V ++L K+Q + AT+ ILKIDD+I+ Sbjct: 274 VDKIKAMGVKLFITQKDIDEIASYLMGKNGIMALKNVKRSDIELLSRATGAKIASSMKDANESDLGEAKLVEVRNLG--KNKYLFIQS-DKAKAVTVIIKGSNNMITDEAERSLNDAFNSIRNLLLEPYIVAGGGAVEEELAKRLRDDARKVIGKEQLAFNAFADALEEYVSILSETAGMDPISALTEIRHKH-ATGLKNAGIDVTKARIYDNMLELRVIDSLKVKEQVLKSATEAATAILKIDDMIA 517 The following BLAST results are available for this feature:
BLAST of CX671363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671363 ID=CX671363; Name=CX671363; organism=Citrus sinensis; type=EST; length=886bpback to top |