CX671363
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPZ_CHICK (T-complex protein 1 subunit zeta OS=Gallus gallus GN=CCT6 PE=1 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 2.100e-26 Identity = 76/236 (32.20%), Postives = 122/236 (51.69%), Query Frame = -3 Query: 147 LVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 854 +VI Q G D + L + A+R +E + +A GG + ++LTP+ LG AGLV E + G +++ +IE C N R+VT+ IRG NK + + K ++ D L +N I + ++ G GA E+A + A+ G Q ++AFADAL IP LA+NSG P ETL V+ + E+ G+D N +++ K+Q + T + IL +D+++ Sbjct: 289 IVINQKGIDPFSLDALAKEGIVALRRAKRRNMERLTLACGGTAMNSVEDLTPDCLGHAGLVYEYTLG--EEKYTFIEKCDNPRSVTLLIRGPNKHTLTQIKDAVRDGLRAVKNAIEDGCVIPGAGALEVAVANALVKHKPNVKGRAQLGVQAFADALLIIPKVLAQNSGYDPQETLVKVQAEH-AESGQLTGVDLNTGEPMVAAAAGIWDNYNVKKQLLHSCTVIASNILLVDEIM 521
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPQ_CHICK (T-complex protein 1 subunit theta OS=Gallus gallus GN=CCT8 PE=1 SV=3) HSP 1 Score: 119.783 bits (299), Expect = 2.100e-26 Identity = 80/249 (32.13%), Postives = 125/249 (50.20%), Query Frame = -3 Query: 147 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAV-TIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCG--IDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 884 V+ D GA +V+ D A H NL VR +L + G +PR T E++G V G TQ ++ +H A+ TI IRG ++++ +R++ D + + L R+ +V GGGA EI + + + + PG++QYAI+ FA+A +AIP ALAENSG++ E +S + +E N N G I+ DM E + +T +GK I LAT +L++D +I Sbjct: 280 VKAIADSGANVVVTGGKVADMALHYANKYNLMIVRLNSKWDLRRLCKTVGATALPRLTPPTLEEMGHCNSVYLSEVGDTQ--VVVFKHEKEDGAISTILIRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLDQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVH-QEGNKNVGFDIEAEAAAVKDMLEAGILDTYLGKYWGIKLATNAAVTVLRVDQII 525
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPG_DROME (T-complex protein 1 subunit gamma OS=Drosophila melanogaster GN=Cctgamma PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 2.100e-26 Identity = 85/254 (33.46%), Postives = 127/254 (50.00%), Query Frame = -3 Query: 135 CKDVGAT---LVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGK-AGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNC---GIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 875 C D+ A LV + G D A H L+ + A+R + + IA A G IV R +ELT + +G AGL K G + ++ C +A TI +RG +K ++ ET+R++ DAL VARNL+ +V GGGA E+A S + + P A A AL+ IP LA+N G I L+A++ + GID DM +N++E L K Q A + ++L+IDD++S S+ Sbjct: 281 CADIIAVKPDLVFTEKGVSDLAQHYLLKAGITAIRRLRKTDNLRIARACGATIVNRTEELTEKDVGTGAGLFEVKKIG--DEYFTFVTECKEPKACTILLRGASKDILNETERNLQDALHVARNLVLEPRLVAGGGAVEMAASQLLTRKQVKGP------YTAVAHALEIIPRTLAQNCGANTIRALTALRAKHASHTGDGVCAWGIDGESGEIVDMNVKNIWEPLAVKLQTYKTAVETAILLLRIDDIVSGSK 526
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPA_TETPY (T-complex protein 1 subunit alpha OS=Tetrahymena pyriformis PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.100e-26 Identity = 82/265 (30.94%), Postives = 130/265 (49.06%), Query Frame = -3 Query: 147 QKCKDV---GATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEK--------LGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAEN---------SGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 881 ++CK + GA ++I G DD A L+ + +R V +L +A ATGG IV TPE LG+ V E++ G ++ + + +I IRG N+ M++E RS+HD+LCV + + + +V GGGA EIA SI ++ A EQ A+ F +AL+ IP LA N S L+ + S + ++ NCG+D + + + V E ++ K + + AT+ IL+IDD+I Sbjct: 273 ERCKKIIEAGANVIITSAGMDDVATKYLVEAGVMGLRRVDKHDLRRLAKATGGTIVTTLA--TPEGDEVFEASYLGECAEVYEEAVGDND--CIFFKGTKRANCASIIIRGANEFMVDEVDRSLHDSLCVVKRTLESGYVVPGGGAVEIALSIKLEDFARTLGTKEQTAVAEFCEALNIIPKVLAANAAQDATELVSKLRALHAASQSSDDPAKKELKNCGLDLSLGKVRNNVKAGVLEPMVSKIKSLRFATEAAITILRIDDMI 533
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPZ_PONAB (T-complex protein 1 subunit zeta OS=Pongo abelii GN=CCT6 PE=2 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 2.743e-26 Identity = 77/236 (32.63%), Postives = 123/236 (52.12%), Query Frame = -3 Query: 147 LVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 854 +VI Q G D + L + A+R +E + +A GG + F +L+P++LG AGLV E + G +++ +IE C N R+VT+ I+G NK + + K ++ D L RN I + +V G GA E+A + A+ G Q ++AFADAL IP LA+NSG ETL ++ + E+ G+D N E V++ K+Q + T + IL +D+++ Sbjct: 290 VVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDQLGHAGLVYEYTLG--EEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVRNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEH-SESGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPB_RAT (T-complex protein 1 subunit beta OS=Rattus norvegicus GN=Cct2 PE=1 SV=3) HSP 1 Score: 119.398 bits (298), Expect = 2.743e-26 Identity = 65/205 (31.71%), Postives = 111/205 (54.15%), Query Frame = -3 Query: 147 LELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 761 +E +A+ TGG I F KLG L+ E G +D++++ A A TI +RG + +++E +RS+HDALCV +++ VYGGG +E+ + AV A R PG E A+ +FA AL +P +A+N+G + ++ ++ E G+D + DM + E+ K+Q +L A + ++IL++D++I Sbjct: 320 VERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIG--EDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDPRTVYGGGCSEMLMAHAVTMLASRTPGKEAVAMESFAKALRMLPTIIADNAGYDSADLVAQLRAAH-SEGRITAGLDMKEGSIGDMAVLGITESFQVKRQVLLSAAEAAEVILRVDNII 521
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPB_MOUSE (T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4) HSP 1 Score: 119.398 bits (298), Expect = 2.743e-26 Identity = 65/205 (31.71%), Postives = 113/205 (55.12%), Query Frame = -3 Query: 147 LELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 761 +E +A+ TGG I F KLG L+ E G +D++++ A A TI +RG + +++E +RS+HDALCV +++ VYGGG +E+ + AV A+R PG E A+ +FA AL +P +A+N+G + ++ ++ E + G+D + DM + E+ K+Q +L A + ++IL++D++I Sbjct: 320 VERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIG--EDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDPRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESFAKALRMLPTIIADNAGYDSADLVAQLRAAH-SEGHITAGLDMKEGTIGDMAVLGITESFQVKRQVLLSAAEAAEVILRVDNII 521
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.583e-26 Identity = 81/263 (30.80%), Postives = 134/263 (50.95%), Query Frame = -3 Query: 135 VQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELT------PEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVK-------NQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVISPSE 884 +QK + GA +++ G DD + N AVR V+L+ +A ATGG+++ ++ P KLG A V ++ D ++ + + +I +RG N ++E +RS+HDAL V + ++ + IV G GA E A SI ++ A EQ AI FA A+ +IP LA N+G+ E ++ ++ ++ + +N G+D N+ D +E VFE L+ K + + AT+ IL+IDD+I E Sbjct: 272 IQKILNAGANVILTTGGIDDLCMKYFVEVNAMAVRRCKKVDLKNMAKATGGQLIVSLADMEGDEVFDPTKLGNAEEVSQERI--CDDELIILRGPKVHPSASIILRGANDFYVDEMERSLHDALLVVKRVLESKRIVPGAGACETAVSIYLENYALTLSSREQLAIAEFARAMLSIPKQLAVNAGVDSTELVARLRSCHNSSQSKPDQAHNKWWGLDLNNQYVADCKEIGVFEPLVSKIKSLKFATEAAITILRIDDLIKLKE 532
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPD_YARLI (T-complex protein 1 subunit delta OS=Yarrowia lipolytica GN=CCT4 PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.679e-26 Identity = 74/225 (32.89%), Postives = 121/225 (53.78%), Query Frame = -3 Query: 150 ANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVRE-KSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDV 821 A H L N+ ++ + ++E I+ +TG + V + T +KLG LV E +S G+ R E S V+I +RG N ++I+ET+RS+HDALCV R+L R ++V GGGA E+ + + + G F++A+ IP LAEN+GL P+ ++ ++ + + N GI GT+ M E++V + + I LA + K +L+IDD+ Sbjct: 304 ALHFLAKLNIMVIKDIERDDIEFISRSTGAKPVADIEAFTEDKLGSCDLVEEVESSGSKTVRFSSRE---GSNTVSILVRGANDLVIDETERSLHDALCVLRSLFRVPALVPGGGACEVQVAQVIGKESRAMDGASAICYEEFSNAMLVIPTTLAENAGLNPVNVVTELRVRH-EKGEVNAGISVRR-GTSIMVEEHVIQPALVTTSAITLAAECAKGLLRIDDI 523
BLAST of CX671363 vs. ExPASy Swiss-Prot
Match: TCPW_HUMAN (T-complex protein 1 subunit zeta-2 OS=Homo sapiens GN=CCT6B PE=1 SV=4) HSP 1 Score: 118.242 bits (295), Expect = 6.111e-26 Identity = 75/236 (31.78%), Postives = 125/236 (52.97%), Query Frame = -3 Query: 147 LVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 854 +VI Q G D + L + A+R +E +++A GG V F++LT + LG AGLV E + G +++ +IE C N +VT+ ++G NK + + K +I D L +N I + +V G GA E+A + A+ + G + ++AFADAL IP LA+N+G P ETL V+ + + E+ G+D N + V++ K+Q + T + IL +D+++ Sbjct: 290 VVINQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLG--EEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHV-ESKQLVGVDLNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIM 522 The following BLAST results are available for this feature:
BLAST of CX671363 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671363 ID=CX671363; Name=CX671363; organism=Citrus sinensis; type=EST; length=886bpback to top |