CX671361

Overview
NameCX671361
Unique NameCX671361
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length733
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX671361 vs. ExPASy Swiss-Prot
Match: ARA1_YEAST (D-arabinose dehydrogenase [NAD(P)+] heavy chain OS=Saccharomyces cerevisiae GN=ARA1 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 6.098e-15
Identity = 46/147 (31.29%), Postives = 83/147 (56.46%), Query Frame = -1
Query:  218 KSIGLSNFSCKKIDTILAFATIPPSINQVEMHPVRQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQIAQRRLIPSDFLISP 658
            ++IG+SNFS + ++ ++    + P++NQVE HP   Q +LR+FC +  + +TAYSPLG+ G        ++   +K++AE +  T   + + + + QG  V+ RSLNP R+  ++      LT D+  ++N   ++   P  F+  P
Sbjct:  187 RAIGVSNFSIEYLERLIKECRVKPTVNQVETHPHLPQMELRKFCFMHDILLTAYSPLGSHGA-----PNLKIPLVKKLAEKYNVTGNDLLISYHIRQGTIVIPRSLNPVRISSSIEFA--SLTKDELQELNDFGEK--YPVRFIDEP 324          
BLAST of CX671361 vs. ExPASy Swiss-Prot
Match: I3ACR_SCHPO (NAD/NADP-dependent indole-3-acetaldehyde reductase OS=Schizosaccharomyces pombe GN=SPAC19G12.09 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.162e-14
Identity = 46/148 (31.08%), Postives = 75/148 (50.68%), Query Frame = -1
Query:  260 WEAMEESQRLGLTKSIGLSNFSCKKIDTILAFATIPPSINQVEMHP--VRQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQI 697
            W+AME +   GL  S+G+SNF    ++ +L  +TI P +NQ+E HP   +  + L EFC+ KG+ V  Y PL  +  R     V   E  K +   +  +  Q+ L+W   +GV  +  +   ER+K+ L    + L   D D++  +
Sbjct:  125 WKAMETALGTGLVHSVGVSNFRIPDLEELLKTSTITPRVNQIEFHPQVYKAAKPLVEFCQSKGIIVEGYGPLSPL-VRDAQGPVA--EFTKSLESKYHVSDTQILLKWAYSKGVIPITTTSKIERMKECLNFDSFTLDKADIDELGTL 269          
BLAST of CX671361 vs. ExPASy Swiss-Prot
Match: YKW2_SCHPO (Uncharacterized oxidoreductase P32A8.02 OS=Schizosaccharomyces pombe GN=SPAP32A8.02 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.805e-14
Identity = 44/141 (31.21%), Postives = 80/141 (56.74%), Query Frame = -1
Query:  284 WEAMEESQRLGLTKSIGLSNFSCKKIDTILAFATIP---PSINQVEMHPVRQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDD 697
            W+AMEE    G  +S+G+SN+  K +  +  +A+ P   P +NQ+E+HP   Q  + ++C+   + + AYSPL   G R      + +E L  IA+    +VAQ+ +RW +++G   +++S   E +  +L +F++ + DD
Sbjct:  128 WKAMEEFVDSGDIRSVGVSNYGVKHLQEL--YASNPKFYPCVNQIELHPFLSQDDIVKYCQSHDIAIEAYSPL-THGIR------LNDEKLVPIAKKLNISVAQLLIRWSLQKGYIPIIKSTKKEHMLSDLDVFNFTIPDD 259          
BLAST of CX671361 vs. ExPASy Swiss-Prot
Match: DKGB_SALTY (2,5-diketo-D-gluconic acid reductase B OS=Salmonella typhimurium GN=dkgB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.962e-13
Identity = 55/174 (31.61%), Postives = 89/174 (51.15%), Query Frame = -1
Query:  212 SPLDYKGVWEAME---ESQRLGLTKSIGLSNFSCKKID-TILAFATIPPSINQVEMHPVRQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQIAQRRLIPSDFLISPHG 721
            SP D   V E M+   E+++ GLT+ IG+SNF+   ++  I A      + NQ+E+ P  Q RK+ ++ K  G+++T+Y  L          + +++E + +IA  H  T AQV L W + +G +V+  S   E L  +L   D  L  +D + I       L  +D L+SP G
Sbjct:  100 SPGDAVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGADNIATNQIELSPYLQNRKVVDWAKAHGIHITSYMTLAY-------GKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTRRENLASSLLAQDLHLDAEDKNAI-----AALDCNDRLVSPEG 261          
BLAST of CX671361 vs. ExPASy Swiss-Prot
Match: DKGB_SALTI (2,5-diketo-D-gluconic acid reductase B OS=Salmonella typhi GN=dkgB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.962e-13
Identity = 55/174 (31.61%), Postives = 88/174 (50.57%), Query Frame = -1
Query:  212 SPLDYKGVWEAME---ESQRLGLTKSIGLSNFSCKKID-TILAFATIPPSINQVEMHPVRQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQIAQRRLIPSDFLISPHG 721
            SP D   V E M+   E+++ GLT+ IG+SNF+   ++  I A      + NQ+E+ P  Q RK+ ++ K  G+++T+Y  L          + +++E + +IA  H  T  QV L W + +G +V+  S   E L  NL   D  L  +D + I       L  +D L+SP G
Sbjct:  100 SPGDAVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGADHIATNQIELSPYLQNRKVVDWAKAHGIHITSYMTL-------AYGKALKDEVIARIAVKHNATPVQVILAWAMGEGYSVIPSSTRRENLASNLLAQDLHLDAEDKNAI-----AALDCNDRLVSPEG 261          
BLAST of CX671361 vs. ExPASy Swiss-Prot
Match: DKGB_ECO57 (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli O157:H7 GN=dkgB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13
Identity = 55/174 (31.61%), Postives = 89/174 (51.15%), Query Frame = -1
Query:  212 SPLDYKGVWEAME---ESQRLGLTKSIGLSNFSCKKID-TILAFATIPPSINQVEMHPVRQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQIAQRRLIPSDFLISPHG 721
            SP D   V E M+   E+++ GLT+ IG+SNF+   ++  I A      + NQ+E+ P  Q RK+  + K  G+++T+Y  L          + +++E + +IA  H  T AQV L W + +G +V+  S   E L+ NL   + +L  +D   I       L  +D L+SP G
Sbjct:  100 SPNDEVSVEEFMQALLEAKKEGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHITSYMTLAY-------GKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRENLESNLKAQNLQLDAEDKKAI-----AALDCNDRLVSPEG 261          
BLAST of CX671361 vs. ExPASy Swiss-Prot
Match: DKGB_ECOLI (2,5-diketo-D-gluconic acid reductase B OS=Escherichia coli (strain K12) GN=dkgB PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.707e-13
Identity = 54/174 (31.03%), Postives = 89/174 (51.15%), Query Frame = -1
Query:  212 SPLDYKGVWEAME---ESQRLGLTKSIGLSNFSCKKID-TILAFATIPPSINQVEMHPVRQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNLGIFDWELTDDDYDKINQIAQRRLIPSDFLISPHG 721
            SP D   V E M+   E+++ GLT+ IG+SNF+   ++  I A      + NQ+E+ P  Q RK+  + K  G+++T+Y  L          + +++E + +IA  H  T AQV L W + +G +V+  S   + L+ NL   + +L  +D   I       L  +D L+SP G
Sbjct:  100 SPNDEVSVEEFMQALLEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHGIHITSYMTLAY-------GKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRKNLESNLKAQNLQLDAEDKKAI-----AALDCNDRLVSPEG 261          
BLAST of CX671361 vs. ExPASy Swiss-Prot
Match: DKGB_YERPE (2,5-diketo-D-gluconic acid reductase B OS=Yersinia pestis GN=dkgB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.832e-12
Identity = 49/140 (35.00%), Postives = 69/140 (49.29%), Query Frame = -1
Query:  314 SPLDYKGVWEAMEE---SQRLGLTKSIGLSNFSCKKI-DTILAFATIPPSINQVEMHPVRQQRKLREFCKVKGMNVTAYSPLGAVGTRWGSNQVMENEALKQIAEAHGKTVAQVSLRWIVEQGVTVVVRSLNPERLKQNL 721
            SP D   V E M E   ++ LGLT+ IG+SNF+   +   I A      + NQ+E+ P+ Q R + +F K  G+ VT+Y  L          + +    +K IAE HG T AQV L W ++ G  V+  S     L  NL
Sbjct:  100 SPNDEVSVAEFMSELLKAKGLGLTRQIGISNFTIDLMKQAIAAVGAEEIATNQIELSPLLQNRNVVDFAKQNGIAVTSYMTLAY-------GKALAEPVIKTIAEQHGATPAQVILSWAMQLGYGVIPSSTKAANLASNL 232          
The following BLAST results are available for this feature:
BLAST of CX671361 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 128
Match NameE-valueIdentityDescription
ARA1_YEAST6.098e-1531.29D-arabinose dehydrogenase [NAD(P)+] heavy chain OS... [more]
I3ACR_SCHPO5.162e-1431.08NAD/NADP-dependent indole-3-acetaldehyde reductase... [more]
YKW2_SCHPO8.805e-1431.21Uncharacterized oxidoreductase P32A8.02 OS=Schizos... [more]
DKGB_SALTY1.962e-1331.612,5-diketo-D-gluconic acid reductase B OS=Salmonel... [more]
DKGB_SALTI1.962e-1331.612,5-diketo-D-gluconic acid reductase B OS=Salmonel... [more]
DKGB_ECO572.562e-1331.612,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
DKGB_ECOLI5.707e-1331.032,5-diketo-D-gluconic acid reductase B OS=Escheric... [more]
DKGB_YERPE4.832e-1235.002,5-diketo-D-gluconic acid reductase B OS=Yersinia... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS10_10F05_b Madame Vinous Sweet Orange Multiple Pathogen-Infected cDNA Library UCRCS10 Citrus sinensis cDNA clone UCRCS10-10F05-K10-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX671361 ID=CX671361; Name=CX671361; organism=Citrus sinensis; type=EST; length=733bp
TTTTTTTTTTTTTTTTTGGTGAAGAAACATGCAAGCAGTGCATACACTTT
TCAATTACAAAAGTGTTTGCATTTCCATCATTATTAAAATTCAAATTATA
GAACCTTACATTTGAAATTAATTATTACATTTCATATAATTTTTGGAATA
TTTGTATTTCGAAAGTCTGAAACTAGCCATCATTCCACAGCTCCTCAGGG
GTCTTGAATGGTCCATGAGGGGAAATAAGGAAATCACTTGGTATCAATCT
ACGCTGTGCGATTTGATTAATCTTGTCATAGTCGTCATCAGTTAATTCCC
AATCGAAGATCCCCAGGTTCTGCTTCAATCTCTCTGGATTGAGGCTCCTG
ACAACAACTGTCACTCCTTGCTCAACTATCCATCTAAGAGAAACCTGAGC
GACAGTCTTGCCATGAGCCTCTGCAATCTGCTTTAGTGCTTCATTCTCCA
TGACTTGATTGCTTCCCCATCTTGTCCCTACGGCTCCCAAAGGTGAGTAC
GCCGTGACATTCATGCCCTTGACCTTGCAAAATTCTCTAAGCTTCCTTTG
TTGCCGGACAGGGTGCATCTCCACCTGATTGATGGAAGGAGGGATGGTAG
CGAAGGCGAGTATAGTGTCAATCTTCTTGCAAGAGAAGTTGCTGAGACCA
ATGGACTTAGTGAGGCCGAGCCTTTGAGATTCTTCCATGGCTTCCCACAC
GCCCTTGTAGTCCAAAGGTGAAAGGTCCTCTTT
back to top