EY664329

Overview
NameEY664329
Unique NameEY664329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length591
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY664329 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.552e-14
Identity = 48/135 (35.56%), Postives = 73/135 (54.07%), Query Frame = 1 
Query:   19 PRVRSIIDELE----------SNPDKVFLKTITAQLQTILGISLIEILSRHSTDEVYLGQ-RDTP--EWTSYEAPLQAFDEFGKKLAEVEEKIISRNHNKNLKNRVGPVKMPYTLLVPTSEGGLTGKGIPNSVSI 384
            P +R ++ +LE          ++P + FL  +   L+    +++++ LS HS DE YLG+ RD     WT+ EA + A   F   +   EE I  RN +   KNR G   +PY LL P+S  G+T +G+PNS+SI
Sbjct:  784 PLIRRLLPDLERDAAEYAAFLADPHRFFLNAMPGVLEATKFMAVVDTLSTHSPDEEYLGEGRDEGGVPWTADEAAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPPGVTCRGVPNSISI 918
The following BLAST results are available for this feature:
BLAST of EY664329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOX6_ORYSJ1.552e-1435.56Probable lipoxygenase 6 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-065-D09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY664329 ID=EY664329; Name=EY664329; organism=Citrus sinensis; type=EST; length=591bp
CCGGNATTCCAGGCCCGACCCCGCGTCCGCTCCATAATTGATGAGCTTGA
GTCCAATCCTGACAAAGTTTTCTTAAAAACAATCACTGCTCAGCTGCAAA
CCATTCTAGGCATTTCCCTTATAGAAATCTTGTCAAGGCATTCAACTGAT
GAAGTTTATCTCGGACAAAGAGACACCCCAGAATGGACATCATATGAAGC
ACCATTGCAAGCATTTGATGAATTTGGAAAGAAACTGGCAGAAGTTGAGG
AAAAAATTATCAGCAGAAACCATAATAAGAATTTAAAGAATCGGGTTGGC
CCGGTGAAAATGCCATATACTTTGCTCGTTCCTACTAGTGAAGGCGGGCT
TACAGGAAAAGGAATCCCCAACAGTGTTTCAATATAGAGCTTCTGTACTT
GGATTGTTGTAGTATATGTAAGTTTTGTATCAATGTGGCATTGCAAAATA
ATTTAAATTTAGTCTATGTTCATTTCATCAACTTTAGTCGTAGATAGGAG
AATAAGACTTTGGCCAATAGTAATATTTATATCTAATCAAATTAGGTTAA
CAAAAATAACAAATAAAAATTTATAAAAAAAAAAAAAAAAA
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